Oiva011217.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- nfxl1
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000007.1:13568478-13570958[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 5.1e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 18 0.0053 2.7e+02 3.2 0.3 4 10 170 176 169 177 0.97 3 18 1.6e-07 0.0079 17.6 15.9 3 19 187 203 186 203 0.95 4 18 1 5.1e+04 -5.0 2.1 6 10 228 232 227 232 0.81 5 18 2.7e-06 0.14 13.7 13.9 3 18 240 255 238 256 0.91 6 18 3e-10 1.5e-05 26.3 14.2 1 19 291 309 291 309 0.99 7 18 3e-06 0.15 13.5 18.8 3 19 346 362 338 362 0.86 8 18 0.62 3.2e+04 -3.4 0.4 7 11 366 370 366 370 0.84 9 18 3.3e-05 1.7 10.2 20.3 1 18 396 413 396 414 0.97 10 18 6.4e-08 0.0033 18.9 16.0 1 19 423 441 423 441 0.98 11 18 7e-05 3.6 9.2 6.0 9 19 489 499 487 499 0.89 12 18 0.0013 67 5.1 5.7 1 11 508 517 508 518 0.95 13 18 0.16 7.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 18 0.95 4.8e+04 -4.0 3.3 8 12 568 572 568 579 0.58 15 18 1.4e-05 0.73 11.4 4.0 1 11 588 598 588 599 0.97 16 18 0.26 1.3e+04 -2.2 1.1 15 18 613 616 612 617 0.82 17 18 0.0003 15 7.1 15.8 3 18 629 645 628 646 0.82 18 18 1.9e-05 0.98 11.0 11.3 1 16 687 701 687 706 0.88
Sequence Information
- Coding Sequence
- ATGTCTAGAAAATACCGCGATGCTGCTGCCAAATTGCAGGAAAACGTTAACAAGCACTTGCGAACTATACAACACGAGGTGTCTTCTTCGGAAGACGAAGAACCCTATGAGCAGAATGTACTGGATGGTGTGTTACAAAGCTATTGGAGGGGTGGTGGAGATACACAAATGCTGGAAAGAACTAAAAATCTTCTAGAAGAGGCTATCAGTGTTAGATCTGTTACGTGTCTAATTTGCATCGGTTCTATAAAACGGGTGGACGCGATATGGACTTGTGACCATTGTTACTCCTACTTCCATCTATCGTGTATTCAAAAGTGGTCCAACGACAGTATCAGCTTACGCAGTGAAGAGAACCATGGCCCCATAGCAGTATTCCGACCCAAGAAGATTGAATGGTGCTGTCCTAAATGCAGACATTCATATAACAAAGAGGATATTCCGAGAAAGTACCGTTGCTTTTGCGGTAAAACTGATGATCCTGCTTACCATCCTTGGTTGATTCCTCACACTTGTGGAGAAGTGTGTGGAAAGAGGCTGTCTTTAGGAGAAACCTGTAAGCATAAATGTCTGCTACTGTGTCACCCAGGTCCATGCCCTCCCTGTCCACAGACTGTGACTAGAGCATGCTACTGTGGGAAGGAACATAAGAGAGTCAGGTGTAGCGCAGCCCATTGGTCTTGCCAGCAACAGTGTAACCAGATTCTGCCTTGTAAGTCACATAAATGTGGAATAAAGTGTCATGACGGGAACTGTCCACCTTGCAACAACACAAGCTTGCAGTCTTGTCAGTGTGGAGCAGAGAAGGCCAAGAGACCCTGCAATGATCTCATATGGCAATGTAAAAAGCAATGTGATAAACCATTTGCATGCGGATATCACAAATGTGAGAGGATCTGTCACACTGGCAGTTGTGGTCCATGCCCACACTCTGGAGTTCAATCTTGCCCATGCGGTTCCAATGAGCGCTACATACAATGCCCTGATGTGATAGAAACATGTGTCAGCACTTGCGGCAAGAAGCATGAGGATTGTGAGCATTATTGCCCAGCCAAATGTCATAAGGGACCATGTCCACCATGCCAAGTATTGATTGAAAAAAAATGCCACTGTTCAACACATACTCGATCACTTCCTTGTAGTAAGGACTTCAGATGTGAAACCAAATGTAGAGGCATAAGACCATGCGGCAAACATGGCTGTGGACGAAAATGTTGCAATGGAAACTGCCCTCCTTGTGAGAAGGTCTGCGATAAACCTCTACAATGCAGCAGACATAAATGCACCACTGTGTGCCATCATGGGCCATGCTATCCTTGTCCATTAGAGTCTAAAGTGAGCTGTCGCTGTAAAGAAACATTTGTAACAGTCCCATGTGGTAGAGAAAAGCACACACGACCACCAAAATGTAACCTTCCATGCAAGGTTAAGTATAAATGTGGGCATGTTGAAGAAAATAAACATGCTTGTCATTTTGGTGACTGTCCACCATGTAAAGCCATTTGCAACAAAACATATGAGTGTGGACATAACTGTGTAGCCACATGTCATGCATATGTGTTGGTTGTATTTAAACAGGTGGAAAAGCCTGCTACACCATGGGAGATTCAGCCTTCCAAGACTAAAGTTGTTAACCTTGATTGTCCACCTTGTGAAACACCAGTCTTAGTCACATGTTTTGGAGAACATGAGACTGATTACCAGCCATGCCACACTGCTTGCCGTAGACCCTGTGGTCGTGAATGTGGCAGGCCACTTGAATGTGGAAATCACTTGTGTGAACTACTCTGTCACTTGCATGAATATAATCCTGACTATCCCAATGTGCCTTATGCTTGCAAACCATGCAATAAAGAATGCTTAAAAGACCGCCCAGAGAAATGCACACACAAATGTGCTAAACGTGGCTGTCATCCAGGGCAATGCCCACCGTGTGATGTCTTAGAAAGAATTCCATGTCATTGCAAAGTCACAGAAATGTATATGCACTGTCGAGATTTGGCATCTGCAACCGAAGAAATGTTGAGTTGTAAACAGCAATGCCCAAAGAATTTAGATTGTGGTCATCGCTGCAAGAAGGTGTGTCACTCAGAACCATGTAGAGATAACCAAACATGCATCAAAAAGGCAAAAGTTAACTGTCCCtgtggtaatttaaaaaaagaggcACCATGCAAGTCTGTCAGAAATTCTGAAATACAAATTTTGTGTGATGAAAGTTGTGAAGCTAAAAAAATTGCTGCCAAGTTGGAAagggaaaaagaagaaaaaagattaAAAGAATTAGAACTAGAGAAAAATCGAAGAGAATTAGAGGAATTTGAATGGAAATTGAGTGGTAAGAAGAAAAAGTATAAAGAGAAGAAAATAGTGGTTAACAAGGATGAGAGAAGTTGGTTACGTAAATATTGGGTTCCTATTTTATCTATACCAGTAGTTATTATAGCtgctatttattatatttttaatcctAATATTTAA
- Protein Sequence
- MSRKYRDAAAKLQENVNKHLRTIQHEVSSSEDEEPYEQNVLDGVLQSYWRGGGDTQMLERTKNLLEEAISVRSVTCLICIGSIKRVDAIWTCDHCYSYFHLSCIQKWSNDSISLRSEENHGPIAVFRPKKIEWCCPKCRHSYNKEDIPRKYRCFCGKTDDPAYHPWLIPHTCGEVCGKRLSLGETCKHKCLLLCHPGPCPPCPQTVTRACYCGKEHKRVRCSAAHWSCQQQCNQILPCKSHKCGIKCHDGNCPPCNNTSLQSCQCGAEKAKRPCNDLIWQCKKQCDKPFACGYHKCERICHTGSCGPCPHSGVQSCPCGSNERYIQCPDVIETCVSTCGKKHEDCEHYCPAKCHKGPCPPCQVLIEKKCHCSTHTRSLPCSKDFRCETKCRGIRPCGKHGCGRKCCNGNCPPCEKVCDKPLQCSRHKCTTVCHHGPCYPCPLESKVSCRCKETFVTVPCGREKHTRPPKCNLPCKVKYKCGHVEENKHACHFGDCPPCKAICNKTYECGHNCVATCHAYVLVVFKQVEKPATPWEIQPSKTKVVNLDCPPCETPVLVTCFGEHETDYQPCHTACRRPCGRECGRPLECGNHLCELLCHLHEYNPDYPNVPYACKPCNKECLKDRPEKCTHKCAKRGCHPGQCPPCDVLERIPCHCKVTEMYMHCRDLASATEEMLSCKQQCPKNLDCGHRCKKVCHSEPCRDNQTCIKKAKVNCPCGNLKKEAPCKSVRNSEIQILCDESCEAKKIAAKLEREKEEKRLKELELEKNRRELEEFEWKLSGKKKKYKEKKIVVNKDERSWLRKYWVPILSIPVVIIAAIYYIFNPNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802512;
- 90% Identity
- iTF_00802512;
- 80% Identity
- -