Eedi031105.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euphydryas editha
Gene Symbol
nfxl1
Assembly
GCA_036937285.1
Location
JAUPFZ010000024.1:1557534-1560008[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2 4.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 16 0.01 2.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 16 2.5e-07 0.0058 18.0 14.7 4 19 187 202 185 202 0.95
4 16 4.6e-08 0.0011 20.3 13.1 3 18 239 254 237 255 0.91
5 16 2.3e-09 5.4e-05 24.5 13.4 1 19 290 308 290 308 0.99
6 16 1.6e-06 0.038 15.4 18.0 3 19 345 361 337 361 0.86
7 16 6.7e-05 1.6 10.2 20.3 1 18 395 412 395 413 0.97
8 16 1.4e-08 0.00034 21.9 17.3 1 19 422 440 422 440 0.99
9 16 7.3e-05 1.7 10.1 6.1 9 19 488 498 486 498 0.90
10 16 0.00031 7.3 8.1 6.8 1 12 508 518 508 518 0.96
11 16 0.31 7.3e+03 -1.5 3.5 14 18 547 551 547 552 0.87
12 16 0.18 4.1e+03 -0.7 0.4 8 12 568 572 567 579 0.81
13 16 1.5e-05 0.36 12.2 2.9 1 11 588 598 588 599 0.97
14 16 0.8 1.9e+04 -2.8 1.3 15 18 613 616 612 617 0.84
15 16 0.00027 6.4 8.2 16.4 3 18 629 645 628 646 0.82
16 16 5.4e-07 0.013 16.9 12.6 1 16 687 701 687 706 0.94

Sequence Information

Coding Sequence
ATGGCTAGGAGGTATCGGGACGCCGCTGCGAAATTGCAGCAAAATGTTCAAAAACATTTACAAGTTATGAAAGAAGTGTCTTCTTCCGAAGACGACGAACCTTTCGACCAGAATGTTTTAGACGGAGTTTTCCAGAGCTACTGGCGAGGGGGCGGAGATAAACAGATGCTGAATAGAACGAAGAATCTTCTAGAAGAAGCGATAAGTGGCCGCTCTGTGACATGTTTAATTTGTATCGGATCTGTTAAACGAGTAGATGCTATCTGGACCTGTGACCATTGCTATTCGTATTTCCATCTTTCATGTATACAAAAGTGGTCAAACGATAGTATAAGCCTGCGCAGTGAAGAGAATCATGGACCCATTGCAGTgttcaaaccaaaaaaaatcgAATGGTGCTGTCCGAAATGCAGACAGTCTTACAGCAAGGAGGAAATACCTCGTAAATATCGCTGTTTTTGCGGTAAAACTGACAACCCACCTTATCATCCTTGGTTAATACCTCACACTTGTGGAGAAGTGTGTGGTAAAAGATTGTCCATTGGAGataattgtttacataaatgTCTTTTACTTTGTCACCCTGGTCCCTGTCCTCCGTGTCCACAAACAGTAAATGGAGTTTGTTACTGTGGCAAAGAACGTAAGAAAGTAAGATGCAGTTCTGGTAAATGGTCATGTATGCAGCAGTGTAAGAAATTGTTACCTTGTAAATCTCATACATGTGAAAACACATGCCACTTAGGAGATTGTCCGCCTTGCAATTATTCAAGCTTACAATCTTGTCAATGTGGTGCTGAGAAGACTAAACGACCATGCAATGATTTAAAATGGCAATGTATGAAAAAATGTAACAAGATGTTTTCTTGTGGATATCATAAATGTGAAAAAATATGTCATACAGGTAGTTGTGGGACATGCCCTAACTCAGGAATCATGTCATGTCCCTGCGGAGCTAACCAGCGTTTTATACAATGTCCTGATTCCATCGAAACCTGCTTAAGCACTTGTGGTAAAAAACATGATGACTGCGAGCACAATTGCCCAGCAAAATGTCACAAAGGGCCATGTCCACCCTGCCAAGTCTTGACTGAAAAGAGGTGCCACTGTTCCACACATACAAGATCGCTGCCATGTAGTAAAGAATTCAGATGTGAAACAAAATGTAGAGGGACTAGAATGTGCGGTAAACATGGATGCGGACGAAAATGTTGTAACGGAAACTGTCCACCTTGTGAAAAAATCTGCGATAAGCCTTTACAATGCGGTCGACACAAATGTACTACAGTCTGTCATCATGGCCCCTGCTATCCTTGTCCCTTAGAATCAAAAGTCACTTGTCGTTGCAAGGAAACCTTTGTCACTGTTCCATGCGGTAGAGAAAAGCACACAAAACCACCTAAATGCAATCTCCCTTGCAGAATTAGATACAAATGTGGTCATGTAGATGAGAACAAACACACATGTCATTTTGGTGATTGTCCACCATGCAAAGCTATTTGTAATAAGGTGTATGAAAAATGCGGCCATAATTGTACTGCAGTTTGCCATGAGTATGTATTGGTTGTATTTAAACAGGTGGAAAAACCAGCTACACCATGGGAAGTTCAACCACCAAAGTCTAAAATAGTAGCCCTTGATTGTCCTCCATGTGAAGCCTCGGTTACAGTCACATGTTTTGGGGAACATGAAACTGATAGTCAACCTTGTCATAAAGCTCGTCGACGACCTTGTGGTAGAGAGTGTGGGCGACCGCTTGCATGTGGCAATCATTTCTGTGAACTGCTATGTCACTTATATCAATTTGATCCCGACTACCCAAACGTGCCTTACACTTGCAAACCATGTAACAGAGAGTGCTCCGTTATCCGTCCAGCGAAATGTACGCACAAATGTGCAAAACGCGGCTGCCACCCGGGCCCGTGTCCCCCGTGTGATATTCTAGAGCGAGTGCCGTGTTTTTGCGGTATAACAGATCTTTATCTGCGTTGTCGTGAACTTTTGACAGCAACAGACGAAATGCTCAATTGTAAACAGCAATGCTCAAGGAATCTAGACTGCGGTCatcgttgtaagaatttatgtcATTCTGGGCCTTGTGGACAAAACCAAATTTGTGTTAAAAAGACTAAGATACACTGCCCTTGTGGTAATTTGAAGAAAGAAGCTCCATGTAATGCTATTCGAAAGGGTGATGTATCGGTGAAGTGTGATGAAAGTTGTAAAGCCAAAAAATTAGCTGCAAAATTAGAAAGGGAGAAAGAAGAAAAGAGATTAAGAGAGTTAGAGGAAGAGAGAAATCGTAAAGAATTAGAAGAATACGAATGGAAATTAAGcggaaaaaagaagaaatacaAAGAGAAAAAAGTTGTTGTAAACAAAGATGAACgaaatatgttacaaaaatattgggTTCCTATTTTATCAACACTTGTAGTTATATTAGCtggtatttattacatttttaatgtcTAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLQVMKEVSSSEDDEPFDQNVLDGVFQSYWRGGGDKQMLNRTKNLLEEAISGRSVTCLICIGSVKRVDAIWTCDHCYSYFHLSCIQKWSNDSISLRSEENHGPIAVFKPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDNPPYHPWLIPHTCGEVCGKRLSIGDNCLHKCLLLCHPGPCPPCPQTVNGVCYCGKERKKVRCSSGKWSCMQQCKKLLPCKSHTCENTCHLGDCPPCNYSSLQSCQCGAEKTKRPCNDLKWQCMKKCNKMFSCGYHKCEKICHTGSCGTCPNSGIMSCPCGANQRFIQCPDSIETCLSTCGKKHDDCEHNCPAKCHKGPCPPCQVLTEKRCHCSTHTRSLPCSKEFRCETKCRGTRMCGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETFVTVPCGREKHTKPPKCNLPCRIRYKCGHVDENKHTCHFGDCPPCKAICNKVYEKCGHNCTAVCHEYVLVVFKQVEKPATPWEVQPPKSKIVALDCPPCEASVTVTCFGEHETDSQPCHKARRRPCGRECGRPLACGNHFCELLCHLYQFDPDYPNVPYTCKPCNRECSVIRPAKCTHKCAKRGCHPGPCPPCDILERVPCFCGITDLYLRCRELLTATDEMLNCKQQCSRNLDCGHRCKNLCHSGPCGQNQICVKKTKIHCPCGNLKKEAPCNAIRKGDVSVKCDESCKAKKLAAKLEREKEEKRLRELEEERNRKELEEYEWKLSGKKKKYKEKKVVVNKDERNMLQKYWVPILSTLVVILAGIYYIFNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00802512;
90% Identity
iTF_00843994;
80% Identity
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