g12732.t1
Basic Information
- Insect
- Nymphalis c-album
- Gene Symbol
- nfxl1
- Assembly
- GCA_905332345.1
- Location
- CAJOBY010000023.1:605208-607682[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.0052 1.3e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 18 6.2e-08 0.0016 18.9 14.4 3 19 186 202 185 202 0.95 4 18 4.1e-06 0.1 13.1 8.1 3 18 239 254 237 255 0.91 5 18 5.6e-10 1.4e-05 25.5 12.8 1 19 290 308 290 308 0.99 6 18 2.2e-06 0.056 13.9 19.4 3 19 345 361 337 361 0.86 7 18 0.62 1.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84 8 18 1 2.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 3.3e-05 0.83 10.2 20.3 1 18 395 412 395 413 0.97 10 18 7.2e-09 0.00018 21.9 17.3 1 19 422 440 422 440 0.99 11 18 3.7e-05 0.91 10.1 6.1 9 19 488 498 486 498 0.90 12 18 0.002 50 4.5 5.6 1 12 508 518 508 518 0.90 13 18 0.16 3.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 18 0.32 8e+03 -2.5 0.1 8 12 568 572 567 574 0.80 15 18 2.7e-06 0.068 13.7 4.6 1 11 588 598 588 599 0.97 16 18 0.4 1e+04 -2.8 1.3 15 18 613 616 612 617 0.84 17 18 0.00014 3.4 8.2 16.4 3 18 629 645 628 646 0.82 18 18 1.6e-06 0.04 14.4 14.4 1 16 687 701 687 706 0.88
Sequence Information
- Coding Sequence
- ATGGCAAGAAGGTATCGTGATGCCGCTGCGAAACTGCAGCAAAGTGTTCAAAAACATTTGAACGTTATGAAAGAAGTGTCTTCTTCGGAAGACGACGAACCTTTCGACCAGAATGTATTAGATGGAGTGTTCCAGAGTTACTGGCGAGGGGGCGGCGATAAACAAATGCTAAATAGAACTAAGAATCTTTTAGAAGAAGCGATGAGTGGTCGGTCTGTTACGTGTCTAATTTGTATAGGTTCTATTAAACGTGTAAACGCAATCTGGACCTGTGATCACTGCTACTCATATTTTCATCTTTCATGCATACAAAAGTGGTCGAATGACAGTATAAGCTTACGCACTGAAGAAAATCATGGCCCTATCGCAGTgattttaccaaaaaaaattgaatggtGTTGTCCAAAATGTAGACAGTCTTATAGCAAAGAAGAAATACCTCGTAAATATCGTTGTTTTTGTGGCAAGACTGATGACCCTCCTTTTCATCCTTGGTTAATACCTCACACATGTGGAGAGGTGTGCGGTAAAAGATTATCTACAGGCGACAATTGTATGCATAAATGTCTATTGCTCTGTCACCCTGGTCCTTGTCCGCCATGCCCCCAGACTGTAAATGGAGTATGTTACTGCGGAAAAGAACGTAAAAAGGTAAGATGCAGTGCTGCTAAATGGTCATGTATGCAGCAGTGTAAAAAAGTTTTGCCATGTAAATCTCATGTATGTGAAAATATATGCCATATTGGAGACTGTTTTCCTTGCAATTATACAAGCTTGCAGGCATGTCAGTGCGGTGCTGAAAAGACAAAACGGCCATGCAATGACCTAAAATGGCAGTGTACAAAACAATGTAATAAGTTATTTTCCTGTGGGTACCATAAATGTGAAAAGGTATGCCATACGGGCAGTTGTGGAGTATGTCCAAATTCAGGAATCAGGTCCTGCCCCTGTGGAGCCAATCAACGTTTCATTCAATGTCCAGACACTATAGAAACCTGCGTTGGTACTTGTGGAAAACAACACGATGACTGTGAGCATAATTGCCCAGCGAAATGCCACAAAGGACCATGTCCGCCATGCCAAGTGTTGATTGAAAAGAAATGCCATTGTTCAACACACACTAGATCGCTACCATGCAGCAAAGAGTTTAAATGTGAAACGAAATGTAGAGGCACAAGATTGTGTGGTAAACATGGCTGCGGGAGAAAATGCTGCAATGGGAACTGTCCTCCATGTGAAAAAGTCTGTGATAAATCTTTACAGTGTGGCCGTCATAAATGTACTACTGTCTGTCATCATGGGCCATGCTATCCATGTCCATTAGAATCAAAAGTTACATGTCGTTGCAAAGAAACATATGTCACAGTTCCATGTGGTAgagaaaaaaacacaaaaccACCAAAATGCAATCTGCcatgcaaaataaaatacaaatgtgGCCATATGGATGAGAACAAACACACTTGCCACTTTGGTGATTGTCCACCATGCAAAGCAATTTGCaacaagttatataaaaaatgcagtCATAACTGCACAGCTATTTGCCATGAATATGTTTTAGTTGTTTTTAAACAGGTGGAAAAGCCTGCCACACCTTGGGAAGTTCAACCACCAAAGTCTAAAATAATGGCAATTGATTGCCCTCCTTGTGAAAGTCCAGTTGAGGTAACATGTTATGGAGAACACGAAACAGACACTCAATCTTGTCATAAAGCAGGTCGACGACCTTGTGGACGTGAATGTGGTCGTCCGCTCGTATGTGGAAATCATTCATGCGAACTATTATGTCACTTATATCAATATAACCCAGACTATTCAAATGTGCCTTATACTTGTAAACCTTGTAACAGAGAGTGCTCCGTACGCCGTCCAGAGAAATGCACTCATAAATGTGCAAAACGTGGTTGCCATCCAGGTCCGTGTCCACCATGTGATACTCTTGAAAGAGTGGCGTGTTATTGTGGTATAACAGATTTATACTTACGTTGTCGGGAACTTTCAACGGCAACAGATGAAATGCTGAGTTGTAAACAACAATGCTCAAGAAATCTAGACTGTGGACATCGTTGTAGAAGTTTATGTCATCCTGGACCATGTGGACAAAATCAGACTTGtattaaaagaactaaaattCACTGTCCTTGTGGTAATTTAAAGAAAGAAGTCCCTTGTATTTCTGTTCGAAAAGGAGATATCACGGTAAAATGTGATGAAAGTTGTGATGCTAAAAAAGTTGCCTTAAAGCTAGAAATGGAAAAGCAAGAAAAGAGATTAAAAGACTTAGAGGAAGAGAGAAATCGAAGGGAGTTAGAAGAATATGAATGGAAACTAAGCGGgaagaaaaagaaatacaagGAGAAGAAAATAGTTATAAACAAAGATGACCGCAATTTGATTCAGAATTATTGGGTTCCTATTTTATCAGTAGTGGTTGTTATGTCGGCtggtatttattacatttttaatatataa
- Protein Sequence
- MARRYRDAAAKLQQSVQKHLNVMKEVSSSEDDEPFDQNVLDGVFQSYWRGGGDKQMLNRTKNLLEEAMSGRSVTCLICIGSIKRVNAIWTCDHCYSYFHLSCIQKWSNDSISLRTEENHGPIAVILPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSTGDNCMHKCLLLCHPGPCPPCPQTVNGVCYCGKERKKVRCSAAKWSCMQQCKKVLPCKSHVCENICHIGDCFPCNYTSLQACQCGAEKTKRPCNDLKWQCTKQCNKLFSCGYHKCEKVCHTGSCGVCPNSGIRSCPCGANQRFIQCPDTIETCVGTCGKQHDDCEHNCPAKCHKGPCPPCQVLIEKKCHCSTHTRSLPCSKEFKCETKCRGTRLCGKHGCGRKCCNGNCPPCEKVCDKSLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETYVTVPCGREKNTKPPKCNLPCKIKYKCGHMDENKHTCHFGDCPPCKAICNKLYKKCSHNCTAICHEYVLVVFKQVEKPATPWEVQPPKSKIMAIDCPPCESPVEVTCYGEHETDTQSCHKAGRRPCGRECGRPLVCGNHSCELLCHLYQYNPDYSNVPYTCKPCNRECSVRRPEKCTHKCAKRGCHPGPCPPCDTLERVACYCGITDLYLRCRELSTATDEMLSCKQQCSRNLDCGHRCRSLCHPGPCGQNQTCIKRTKIHCPCGNLKKEVPCISVRKGDITVKCDESCDAKKVALKLEMEKQEKRLKDLEEERNRRELEEYEWKLSGKKKKYKEKKIVINKDDRNLIQNYWVPILSVVVVMSAGIYYIFNI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802512;
- 90% Identity
- iTF_01506850; iTF_01507749; iTF_01081222; iTF_01508550; iTF_01080394; iTF_01079540;
- 80% Identity
- -