Mcix015994.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melitaea cinxia
Gene Symbol
nfxl1
Assembly
GCA_905220565.1
Location
HG992233.1:1265452-1267926[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 16 0.01 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 16 2.5e-07 0.0039 18.0 14.7 4 19 187 202 185 202 0.95
4 16 4.6e-08 0.00072 20.3 13.1 3 18 239 254 237 255 0.91
5 16 2.3e-08 0.00036 21.3 12.4 1 19 290 308 290 308 0.99
6 16 4.9e-06 0.077 13.8 19.6 3 19 345 361 337 361 0.86
7 16 1.2 1.9e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 16 6.7e-05 1 10.2 20.3 1 18 395 412 395 413 0.97
9 16 1.4e-08 0.00022 21.9 17.3 1 19 422 440 422 440 0.99
10 16 7.3e-05 1.1 10.1 6.1 9 19 488 498 486 498 0.90
11 16 0.0018 28 5.7 6.2 1 12 508 518 508 518 0.90
12 16 0.31 4.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87
13 16 0.9 1.4e+04 -3.0 3.2 8 12 568 572 567 579 0.64
14 16 5.5e-06 0.086 13.7 4.6 1 11 588 598 588 599 0.97
15 16 0.00027 4.3 8.2 16.4 3 18 629 645 628 646 0.82
16 16 8.7e-07 0.014 16.2 13.7 1 16 687 701 687 706 0.88

Sequence Information

Coding Sequence
ATGGCTAGAAGATATCGCGACGCCGCTGCAAAATTGCAGCAAAATGTCCAAAAACATTTGCAAGTTATGAAAGAAGTGTCTTCTTCCGAAGACGACGAACCATTCGACCAAAATGTTTTGGACGGAGTTTTCCAGAGCTACTGGCGTGGGGGTGGTGACAAGCAGATGCTGAATAGAACGAAGAATCTTCTAGAAGAAGCGATAAGCGGACGGTCTGTGACATGTTTAATTTGCATCGGATCCATCAAACGTGCAGATGCAATCTGGACTTGTGACCATTGCTTCTCATATTTTCATCTTTCGTGTATACAAAAGTGGTCAAACGATAGTATAAGTCTACGCAGTGAAGAAAATCATGGTCCCATTGCTGTGTTTAAGCCGAAAAAAATCGAATGGTGCTGTCCGAAATGTCGACAATCGTACAGTAAGGAGGAAATACCTCGGAAATATCGTTGTTTTTGCGGTAAGACTGACGACCCTCCTTACCATCCTTGGTTAATACCCCACACTTGCGGAGAGGTGTGCGGCAAGAGGTTATCCACCGGAAACAACTGTTTACATAAATGTCTTCTACTCTGCCATCCCGGCCCTTGCCCTCCATGCCCTCAGACAGTAAACGGAGTTTGTTACTGTGGCAAAGAACATAAGAAAGTAAGGTGCAGTTCCGGTAAATGGTCTTGTATGCAACAGTGCAAAAAATTGTTACCTTGTAAATCGCATACATGTGAAAACACATGCCACTTAGGAGATTGCCCCCCTTGCAATTATTCAAGCCTCCAGTCTTGTCAATGTGGTGCTGAGAAGACTAAACGACCATGTAACGATTTAAAATGGCAGTGTAAGAAGCAATGTGATAAGATGTTTTCTTGTGGGTATCATAAATGTGTAAAAATATGTCATACAGGTAGCTGTGGGACTTGTCCTAACTCGGGAATTATGTCTTGTCCCTGTGGAGCCAACCAGCGTTTCATCCAGTGTCCTGATTCCATTGAGACCTGCGTAGGTACTTGTGGTAAAAAACATGAAGACTGTGAGCACAATTGCCCAGCGAAATGCCATAAAGGGCCGTGTCCACCCTGCCAAGTTTTGATTGAAAAGAAGTGTCACTGTGCAACACACACTAGATCACTGCCATGTAGTAAAGAGTTTAGATGTGAAACAAAATGTAGAGGCACTAGGATGTGCGGTAAACATGGATGTGGAAGAAAATGTTGCAACGGAAACTGTCCACCGTGTGAAAAGGTGTGTGATAAACCTCTACAGTGCGGTAGACACAAATGTACTACAGTCTGCCATCATGGCCCTTGCTATCCTTGTCCCTTAGAGTCAAAAGTTACATGCCGTTGCAAGGAAACCTTTGTAACCGTACCATGCGGTAGAGAAAAGCACACAAAACCACCTAAATGTAATCTCCCTTGCAAAATTAAGTATAAATGTGGTCACGTAGATGAAAATAAACACACGTGTCATTTTGGTGACTGTCCACCGTGCAAAGCTATTTGTAATAGGACATATGAAAAATGCAGCCATAACTGCAAAGCAGTGTGCCATGAGTATGTTTTGGTCGTATTTAAACAGGTGGAAAAACCGGCTACACCATGGGAAGCTCAACCGCCAAAGTCTAAAATAGTAGCCATCGATTGCCCACCATGTGAAACCCCTGTAACAGTCACATGTTTTGGGGAACATGAAACAGACAGACAACCTTGTCATAAAGCTTGTCGACGACCTTGCGGTAGAGAGTGCGGGCGACCACTGGCTTGCGGTAACCATTCATGTGAACTGCTATGCCACTTGTATCAGTATGATCCTGACTACCCAAACGTGCCTTACACTTGCAAATCGTGTAACAGAGAGTGTTCAGTTATCCGTCCAGCAAAATGTACTCACAAATGTGCAAAACGAGGCTGCCACCCGGGCCCTTGTCCTCCGTGTGATGTGTTAGAGCGAGTGCCGTGCTATTGCGGTATAACAGATCTTTATATGCGTTGTCGTGAACTTTCGACAGCAACAGACGAAATGCTCAGTTGTAAACAGCAATGCTCAAGAAATCTAGACTGCGGTCACCGTTGTAAAAATTTATGTCACTCTGGGCCTTGTGGGCAGAACCAGACTTGTATTAAGAAGACTAAAATTCACTGCCCTTGTGGTAATTTGAAGAAAGAAGCACCTTGCAACTCTATTCGAAAGGGCGATGTATCTGTTAAATGTGATGAAAGTTGTAACGCTAAAAAGTTAGCAGCAAAATTAGAAAGAGAAAAAGAAGAAAAGAGATTGAAAGAGTTAGAGGAAGAGAGAAATCGTAAAGAATTAGAAGAATACGAATGGAAACTGAGTGGAAAAAAGAAGAAATACAAAGAGAAAAAAGTTGTCTTAAATAGAGATGATCGTAACATGTTACAGAAATATTGGGTTCCTATTTTGTCATTAGTTGTAGTAATACTAGCTGGTATTTATTACGTTTATAATGTCTAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLQVMKEVSSSEDDEPFDQNVLDGVFQSYWRGGGDKQMLNRTKNLLEEAISGRSVTCLICIGSIKRADAIWTCDHCFSYFHLSCIQKWSNDSISLRSEENHGPIAVFKPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSTGNNCLHKCLLLCHPGPCPPCPQTVNGVCYCGKEHKKVRCSSGKWSCMQQCKKLLPCKSHTCENTCHLGDCPPCNYSSLQSCQCGAEKTKRPCNDLKWQCKKQCDKMFSCGYHKCVKICHTGSCGTCPNSGIMSCPCGANQRFIQCPDSIETCVGTCGKKHEDCEHNCPAKCHKGPCPPCQVLIEKKCHCATHTRSLPCSKEFRCETKCRGTRMCGKHGCGRKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETFVTVPCGREKHTKPPKCNLPCKIKYKCGHVDENKHTCHFGDCPPCKAICNRTYEKCSHNCKAVCHEYVLVVFKQVEKPATPWEAQPPKSKIVAIDCPPCETPVTVTCFGEHETDRQPCHKACRRPCGRECGRPLACGNHSCELLCHLYQYDPDYPNVPYTCKSCNRECSVIRPAKCTHKCAKRGCHPGPCPPCDVLERVPCYCGITDLYMRCRELSTATDEMLSCKQQCSRNLDCGHRCKNLCHSGPCGQNQTCIKKTKIHCPCGNLKKEAPCNSIRKGDVSVKCDESCNAKKLAAKLEREKEEKRLKELEEERNRKELEEYEWKLSGKKKKYKEKKVVLNRDDRNMLQKYWVPILSLVVVILAGIYYVYNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00802512;
90% Identity
iTF_00843994;
80% Identity
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