Vtam016380.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vanessa tameamea
Gene Symbol
nfxl1
Assembly
GCA_037043105.1
Location
CM073300.1:815078-817552[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.0052 1.3e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 18 6.2e-08 0.0015 18.9 14.4 3 19 186 202 185 202 0.95
4 18 5.6e-07 0.014 15.9 9.6 3 18 239 254 237 255 0.91
5 18 8.4e-10 2.1e-05 24.9 12.7 1 19 290 308 290 308 0.99
6 18 2.6e-06 0.064 13.7 19.6 3 19 345 361 337 361 0.86
7 18 0.62 1.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 18 3.3e-05 0.82 10.2 20.3 1 18 395 412 395 413 0.97
9 18 7.2e-09 0.00018 21.9 17.3 1 19 422 440 422 440 0.99
10 18 0.99 2.4e+04 -4.1 1.8 6 10 469 473 468 474 0.53
11 18 3.6e-05 0.9 10.1 6.1 9 19 488 498 486 498 0.90
12 18 0.0013 33 5.1 6.1 1 12 508 518 508 518 0.90
13 18 0.16 3.9e+03 -1.6 3.3 14 18 547 551 547 552 0.86
14 18 0.56 1.4e+04 -3.3 2.2 8 11 568 571 567 583 0.70
15 18 0.00045 11 6.6 5.6 1 11 588 598 578 599 0.91
16 18 0.4 9.8e+03 -2.8 1.3 15 18 613 616 612 617 0.84
17 18 0.00014 3.3 8.2 16.4 3 18 629 645 628 646 0.82
18 18 8.4e-07 0.021 15.3 12.7 1 18 687 706 687 707 0.87

Sequence Information

Coding Sequence
ATGGCTAGGAGGTATCGTGATGCCGCTGCGAAACTGCAGCAAAGTgttcaaaaacatttgaatgtTATGAAGGAAGTTTCTTCCTCGGAAGACGACGAACCTTTCGACCAGAGTGTATTAGATGGAGTGTTCCAGAGTTACTGTAGAGGTGGTGGCGATAAACAATTGCTTAATAGAACGAAGAACCTTTTAGAAGAAGCAATAAGCGGCCGCTCTGTAACGTGTCTAATTTGTATCGGTTCTATAAAACGAGTGAATGCAATCTGGACGTGTGATCACTGCTACTCATATTTTCATCTTTCATGTATACAAAAGTGGTCAAACGATAGTATAAGCTTACGCAGTGAAGAAAATCATGGCCCTATTGCAGTGTTCTTAcctaaaaaaattgaatggtGCTGTCCAAAATGTAGACAGTCCTATAGCAAGGAAGAAATACCTCGTAAATATCGCTGTTTTTGTGGTAAGACTGACGACCCTCCTTTTCACCCCTGGTTGATACCTCACACATGTGGGGAGGTGTGCGGTAAAAGATTGTCTGTTGGAGACAATTGTATGCATAAATGTCTATTGCTCTGTCATCCTGGTCCTTGTCCACCGTGCCCTCAAACCGTCAATGGAGTATGCTACTGTGGGAAAGAATGTAAAAAAGTCAGATGCAGTGCTGCTAAATGGTCATGTATGCAGCAGTGTAAAAAAACTTTGCCATGTAAATCTCACTCGTGTGAAAATATATGCCATATTGGGGACTGTCTCCCTTGCAATTATACAAGCTTGCAGTCCTGTCAGTGTGGTGCTGAAAAGATAAAGCGGCCATGCAATAACCTCAAATGGCAGTGTACAAAACAATGTAACAAGCCTTTTGCTTGCGGGTATCATAAATGTGAAAAGATATGCCACACAGGCAATTGTGGAGCATGTCCTAATTCAGGAATCCGATCTTGCCCCTGTGGAGCTAACCAACGTTTTATTCAATGCCCTGATGCTATAGAAACCTGTGTTGGCACTTGTGGTAAGCAACATAATGACTGTGAGCATAATTGTCCAGCAAAATGCCATAAAGGGCCTTGTCCACCATGCCAAGTTTTGATTGAAAAGAAATGCCACTGTTCAACGCATACCAGATCACTACCATGCAGCAAAGAGTTTAGATGTGAAACAAAATGTAGAGGTATAAGATTGTGTGGTAAACATGGATGTGGACGGAAATGCTGCAACGGAAACTGTCCTCCGTGTGAAAAGATCTGTGATAAATCTTTACAATGTGGCCGTCATAAATGTACTACAGTCTGTCATCACGGGCCATGCTATCCATGTCCATTAGAATCAAAAGTTACATGTCGTTGCAAAGAAACATACGTCACAGTCCCATGTGGTAGAGAAAAACACACAAAACCACCAAAATGCAATCATCCATgcaaaatcaaatacaaatgtGGTCACATGGACGAGAACAAACACACTTGCCATTTTGGTGATTGTCCACCATGCAAAGCAATTTGCaacaagttatataaaaactgtAGCCATAATTGCACTGCTGTTTGTCATGAATATGTATTGGTGGTTTTTAAGCAAGTAGAAAAACCTGCTACTCCTTGGGAAGTTCAACCACCAAAATCTAAAATAGTGGCAATCAATTGCCCTCCCTGTGAAAGACCAGTTGAGGTAACATGTTACGGAGAACACGAAATAGACACTCAACCTTGTCACATTGCAGGTCGACGACCTTGTGGACGTGAATGCGGTCGACCACTAGCATGCACTAATCATTCATGTGAACTGTTATGTCACTTATATCAATATGATGCAGATTATCCAAATGTGCCTTACACTTGCAAACCTTGTAATAGAGAGTGTTCCGTACTCCGTCCAAAGAAATGCACTCATAAATGTGCTAAACGTGGCTGCCATCCAGGCCCCTGTCCACCATGTGATACACTAGAAAGAGTGTCATGTTATTGTGGTGTAACAGATCTATACTTGTCTTGTCGTGAACTCTCAACAGCAACAGATGAAATGCTCAGTTGTAAACAACAATGCTCAAAAAATCTAAACTGTGGACACCGGTGCAGAAATATATGTCATTCCGGACCATGTGGACAAAATCAGACTTGTACGAAAAAAACTAAAGTTCACTGCCCTTGTGGTAATTTAAAGAAAGAATTCCCTTGTATTTCTGTTCAAAAAGGAGATATTACAGTAAAATGTGATGAAAGTTGCAATGCTAAAAAACTAGCCTTAAAGCAAGAAAAAGAAAAGGAAGAAAAGAGATTAAAAGAATTAGAGGAAGAGAGAAATCGTAAGGAATTAGAAGAATATGAGTGGAAACTAAGtggaaagaaaaagaaatacaaGGAGAAGAAGGTTGTTATTAACAAAGATGACCGTAATTTGATTCAGAAATACTGTGTTCCTATTTTATCAGTAGTTATAGTTATTTTGGctggtatttattatatttttaatacttaa
Protein Sequence
MARRYRDAAAKLQQSVQKHLNVMKEVSSSEDDEPFDQSVLDGVFQSYCRGGGDKQLLNRTKNLLEEAISGRSVTCLICIGSIKRVNAIWTCDHCYSYFHLSCIQKWSNDSISLRSEENHGPIAVFLPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSVGDNCMHKCLLLCHPGPCPPCPQTVNGVCYCGKECKKVRCSAAKWSCMQQCKKTLPCKSHSCENICHIGDCLPCNYTSLQSCQCGAEKIKRPCNNLKWQCTKQCNKPFACGYHKCEKICHTGNCGACPNSGIRSCPCGANQRFIQCPDAIETCVGTCGKQHNDCEHNCPAKCHKGPCPPCQVLIEKKCHCSTHTRSLPCSKEFRCETKCRGIRLCGKHGCGRKCCNGNCPPCEKICDKSLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETYVTVPCGREKHTKPPKCNHPCKIKYKCGHMDENKHTCHFGDCPPCKAICNKLYKNCSHNCTAVCHEYVLVVFKQVEKPATPWEVQPPKSKIVAINCPPCERPVEVTCYGEHEIDTQPCHIAGRRPCGRECGRPLACTNHSCELLCHLYQYDADYPNVPYTCKPCNRECSVLRPKKCTHKCAKRGCHPGPCPPCDTLERVSCYCGVTDLYLSCRELSTATDEMLSCKQQCSKNLNCGHRCRNICHSGPCGQNQTCTKKTKVHCPCGNLKKEFPCISVQKGDITVKCDESCNAKKLALKQEKEKEEKRLKELEEERNRKELEEYEWKLSGKKKKYKEKKVVINKDDRNLIQKYCVPILSVVIVILAGIYYIFNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00802512;
90% Identity
iTF_01078748;
80% Identity
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