Mjur021758.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- nfxl1
- Assembly
- GCA_905333055.1
- Location
- HG995212.1:8673956-8676993[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 2.3e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 18 0.0053 1.2e+02 3.2 0.3 4 10 170 176 169 177 0.97 3 18 1.6e-07 0.0036 17.6 15.9 3 19 187 203 186 203 0.95 4 18 0.14 3.3e+03 -1.4 1.6 6 10 228 232 227 233 0.83 5 18 3.5e-07 0.0081 16.5 12.8 3 18 240 255 238 256 0.91 6 18 2.8e-09 6.6e-05 23.2 13.4 1 19 291 309 291 309 0.99 7 18 2.5e-06 0.058 13.8 19.6 3 19 346 362 338 362 0.86 8 18 9.8e-06 0.23 11.9 19.8 1 18 396 413 396 414 0.97 9 18 7.2e-09 0.00017 21.9 17.3 1 19 423 441 423 441 0.99 10 18 3.7e-05 0.86 10.1 6.1 9 19 489 499 487 499 0.90 11 18 0.0017 40 4.7 6.8 1 12 508 518 508 518 0.96 12 18 0.16 3.6e+03 -1.5 3.5 14 18 547 551 547 552 0.87 13 18 0.22 5.1e+03 -2.0 0.4 8 12 568 572 568 579 0.77 14 18 2.5e-05 0.59 10.6 2.9 1 11 588 598 588 599 0.97 15 18 0.26 6e+03 -2.2 1.1 15 18 613 616 612 617 0.82 16 18 0.00047 11 6.5 14.1 3 18 629 645 628 646 0.84 17 18 1.1e-05 0.25 11.8 9.6 1 18 687 706 687 707 0.85 18 18 0.72 1.7e+04 -3.7 0.9 5 10 736 741 736 741 0.90
Sequence Information
- Coding Sequence
- ATGGCTAGAAGATACCGCGATGCTGCCGCCAAATTACAGGAAAACGTTAAGAAACACTTGCAAATTATAAAAAACGAGGTATCTTCTTCAGAAGATGAAGAACCTTTTGAGCAGAATGTCCTGGATGGCGTATTTCAAAGCTATTGGAGGGGTGGTGGAGACAAACAAATGCTAGAAAGAACTAAGAATCTTATTGAAGAGGCGATAAGTGGTAGGTCTATTACGTGTTTAATCTGTATCGGTTCAATAAAGCGGCCGGACGCGATATGGACTTGTGAGCACTGCTACTCCTACTTCCATCTATCGTGTATTCAAAAGTGGTCGAATGACAGCATTAGCTTACGGAGCGAAGAAAGCCATGGCCCGATAGCAGTGTTCCGACCTAAGAAAATTGAATGGTGCTGTCCAAAATGCAGGCACTCTTACGACAGAGACGATATTCCCCGAAAGTATCGCTGCTTTTGTGGTAAAACTGACGATCCTGCCTGCCATCCTTGGTTGATTCCTCACACTTGTGGGGAAGTTTGTGGTAAGAGGCTGTCTTTGGGAGAGAGTTGCAAACACAAATGCCTGCTGCTATGCCATCCAGGGCCGTGCCCCCCGTGTCCACAGACAGTGAACGGAGCATGCTTCTGTGGGAAGGAACGTAAAAGAGTCAGATGCAGTGCAGCTCTTTGGTCTTGCCAGCAACCATGTAAAAAAATACTACCTTGTAAGTCCCATAAATGTGAAATTGAATGCCATGATGGAGACTGTCCACCTTGCAACTACACAAGCTTGCAGTCTTGTCTGTGTGGAGCTGAGAAAATAAAGCGACCCTGCAATGATCTGACATGGCAGTGTACAAAGCAATGTAATAAACCATATGCATGTGGATACCATAAATGTGAGAAAACATGTCACTTAGGCAGTTGTGGTTCATGCCCTAACTCTGGGGTTCAGTCTTGCCCATGTGGCTCCAATGAGCGCTACATACAGTGCCCTGATGTGATTGAGACATGTGTCAGCACTTGTGGGAAGAAGCATGAAGATTGTGAACATAATTGCCCAGCGAAGTGCCATAAAGGGCCATGCCCTCCATGCCAAGTTTTGATAGAAAAAAATTGCCAGTGTTCAACACATACTCGATCACTTCCATGCAGTAAAGAGTTCAGATGTGAAACTAAATGTAGGCGTACAAGACCATGCGGTAAACATGGATGTGGACGCAAATGTTGCGATGGAAATTGTCCTCCTTGTGAAAAGGTTTGTGATAAACCTTTACAATGTGGCCGCCACAAATGCACCACAGTGTGCCATCATGGGCCGTGCTATCCTTGCCCATTGGAATCTAAAGTAACTTGTCGCTGTAAAGAAACATTTATTACAGTCCCTTGCGGTAGAGAAAAACACACACGACCACCAAAATGCTTCCTACCATGTAAGATTAAATATAAGTGTGGACATATTGAAGAAAATAAACACACTTGTCATTTTGGTGACTGTCCACCGTGCAAAGCTGTTTGTAACAAAACATACAAATGTGGGCATAACTGTGTAGCCACTTGTCACGAATATGTGTTGGTTGTGTTTAAACAGCTGGAGAAGCCTGCCACTCCCTGGGAAATTCAGCCTACTAAGACTAAAATTGTGAACCTAGATTGCCCACCTTGTGAAACCCCAGTCTTGATCACATGTTTCGGAGAACATGAGACAGATTACCAGCCGTGCCACACGGCAGCCCGCAGACCCTGCGGTCGTGAATGTGGTAGACCACTCGCATGTGGAAATCACTTATGTGATCTTCTCTGTCATTTGCATGAATTTAATCCTGACTACCCCAATGTGCCTTCCGCTTGCAAACCATGCAACAAAGAATGTACAAAAGTCCGTCCAAAGAAATGCACACACAAATGTGCTAAACAAAGATGTCATCCAGGACCATGTCCACTGTGTGATACCTTGGAAAGAATTCCGTGTCATTGCAAAGTGACAGAAATATATATGCATTGTTGGGAGCTAGCGACTGCAACGGAAGAAATGCTGAGTTGTAAACAGCAATGCCCAAAGATTTTAGATTGTGGCCATCGCTGCAAGAAACTGTGTCATGCAGAGCCATGTAGAGATAACCAAACTTGTTTGAAAAAGGCCAAAATTAACTGTCAATGTGGTAATTTGAAAAAAGAGGCACCATGCAAAGCTGTTAGGAACTCTGAAATACAGATAACGTGTGATGAAAGTTGTGAAGCTAAAAAAATTGCTGCCAAGTTGGAAAAAGAAAAAGAAGAAAAAAGATTAAAAGAACTGGAACTAGAGAAAAATCGAAAAGAATTAGAGGAATATGAATGGAAATTGAGTGGGAAGAAGAAGAAGTATAAAGAGAAGAAAATAGTGGTAAACAGAGATGATAGAAGTTGGTTAGCTAAATATTGGGTTCCTATTTTATCTATACCAGTTGTAATTATAGCTGCTATTTATTACATTATATTGAATCCAAATAATTAA
- Protein Sequence
- MARRYRDAAAKLQENVKKHLQIIKNEVSSSEDEEPFEQNVLDGVFQSYWRGGGDKQMLERTKNLIEEAISGRSITCLICIGSIKRPDAIWTCEHCYSYFHLSCIQKWSNDSISLRSEESHGPIAVFRPKKIEWCCPKCRHSYDRDDIPRKYRCFCGKTDDPACHPWLIPHTCGEVCGKRLSLGESCKHKCLLLCHPGPCPPCPQTVNGACFCGKERKRVRCSAALWSCQQPCKKILPCKSHKCEIECHDGDCPPCNYTSLQSCLCGAEKIKRPCNDLTWQCTKQCNKPYACGYHKCEKTCHLGSCGSCPNSGVQSCPCGSNERYIQCPDVIETCVSTCGKKHEDCEHNCPAKCHKGPCPPCQVLIEKNCQCSTHTRSLPCSKEFRCETKCRRTRPCGKHGCGRKCCDGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETFITVPCGREKHTRPPKCFLPCKIKYKCGHIEENKHTCHFGDCPPCKAVCNKTYKCGHNCVATCHEYVLVVFKQLEKPATPWEIQPTKTKIVNLDCPPCETPVLITCFGEHETDYQPCHTAARRPCGRECGRPLACGNHLCDLLCHLHEFNPDYPNVPSACKPCNKECTKVRPKKCTHKCAKQRCHPGPCPLCDTLERIPCHCKVTEIYMHCWELATATEEMLSCKQQCPKILDCGHRCKKLCHAEPCRDNQTCLKKAKINCQCGNLKKEAPCKAVRNSEIQITCDESCEAKKIAAKLEKEKEEKRLKELELEKNRKELEEYEWKLSGKKKKYKEKKIVVNRDDRSWLAKYWVPILSIPVVIIAAIYYIILNPNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802512;
- 90% Identity
- iTF_00954086;
- 80% Identity
- -