Hmis003246.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypolimnas misippus
Gene Symbol
nfxl1
Assembly
GCA_008963455.1
Location
JBBEEQ010000004.1:9768724-9771198[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.01 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 1.2e-07 0.0019 18.9 14.4 3 19 186 202 185 202 0.95
4 17 5.8e-08 0.0009 20.0 11.9 3 18 239 254 237 255 0.91
5 17 2.8e-08 0.00044 21.0 15.2 1 19 290 308 290 308 0.99
6 17 3.8e-06 0.059 14.2 19.2 3 19 345 361 337 361 0.86
7 17 9.4e-05 1.5 9.7 20.7 1 18 395 412 395 413 0.97
8 17 1.4e-08 0.00022 21.9 17.3 1 19 422 440 422 440 0.99
9 17 2 3.1e+04 -5.7 3.2 9 11 468 470 458 473 0.55
10 17 7.3e-05 1.1 10.1 6.1 9 19 488 498 486 498 0.90
11 17 0.0027 42 5.1 6.1 1 12 508 518 508 518 0.90
12 17 0.31 4.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87
13 17 0.87 1.4e+04 -3.0 2.9 8 12 568 572 567 579 0.63
14 17 5.5e-06 0.085 13.7 4.6 1 11 588 598 588 599 0.97
15 17 0.8 1.2e+04 -2.8 1.3 15 18 613 616 612 617 0.84
16 17 0.00027 4.2 8.2 16.4 3 18 629 645 628 646 0.82
17 17 4.4e-07 0.0069 17.2 12.6 1 16 687 701 687 706 0.87

Sequence Information

Coding Sequence
ATGGCTAGGAGGTATCGCGACGCCGCTGCAAAATTGCAGCAAAATGTTCAAAAACACCTGAAAGTTATGAAAGAAGTTTCCTCTTCGGAAGACGATGAACCATTCGATCAAAACGTTTTGGATGGAGTATTCCAGAGCTACTGGCGGGGCGGCGGGGACAAGCAGATGCTGAATAGGACAAAGAATCTTCTAGAAGAGGCGATTAGCGGCAGGTCTGTTACGTGTTTAATTTGCATAGGTTCTATCAAACGAGTGGATGCTATTTGGACTTGTGATCATTGCTATTCATATTTCCATCTTTCGTGTATACAGAAATGGTCAAACGACAGCATAAGCCTACGCAGTGAAGAGAGTCAGGGCCCTATCGCAGTGTTTAAACCAAAGAAAATTGAATGGTGCTGTCCGAAGTGTAGACAATCGTATAGCAAGGAGGAAGTACCTCGTAAATATCGGTGCTTTTGCGGGAAAACAGACGATCCTCCATTTCATCCTTGGTTAATACCTCACACATGTGGTGAGGTTTGTGGGAAGAGATTGTCAATCGGGGACAATTGTATGCATAAATGTCTCTTGCTCTGTCACCCTGGTCCTTGCCCCCCATGCCCTCAAACTGTAAACGGTATTTGCTACTGTGGTAAAGAACGTAAGAAAGTAAGATGCAGTGCCGCCAAATGGTCATGCTTACAGCaatgtaaaaaattgttaccttgTAAATCTCATTCATGTGAAAATATATGCCATGTAGGAGACTGCCCGCCTTGTAATTACTCAAGTTTACAGTCTTGTCAATGTGGTGCGGAGAAGACAAAACGACCATGCAATGACTTGAAATGGCAGTGTACCAAACAATGCAATAAGCCATTTTCTTGTGGGTATCATAAATGTGATAAGATATGTCACACCGGCGGTTGTGGGCCATGTCCAAACTCAGGAGTCATGTCCTGCCCCTGTGGAGCCAACCAGCGTTTCATCCAGTGCCCTGATTCTATAGAAACTTGTGTAGGTACTTGTGGCAAGAAACATGACGATTGTGAACATAACTGCCCCGCAAAGTGTCATAAAGGGCCCTGTCCTCCATGCCAAGTTTTGATTGAAAAGAAATGCCAATGTTCTACACATACAAGATCATTACCATGCAGCAAAGAGTTTAGATGTGAAACAAAATGTAGAGGCACAAGGTTGTGTGGTAAACATGGATGTGGAAAAAAATGCTGCAATGGAAATTGTCCTCCATGTGAAAAGGTGTGCGATAAACCATTACAATGTGGCCGTCATAAATGTACCACAGTATGTCATCATGGCCCCTGTTATCCTTGCCCATTGGAATCAAAAGTTACATGTCGTTGCAAAGAAACATATGTCACAGTGCCATGTGGTAGAGAAAAGCACACAAAACCTCCCAAATGCCATCTGCCCTGcaagattaaatataaatgtggaCATATAGATGAAAACAAACACACTTGCCATTTTGGTGATTGTCCACCATGCAAAGCAATTTGCAATAAGGTATATGAAAAATGTAGCCATAATTGTACTGCTGTCTGTCATGAGTATGTGTTGGTTGTATTTAAGCAGGTGGAGAAACCAGCTACACCCTGGGAAGTTCAACCACCAAAATCGAAAATAGTAGCTCTTGACTGTCCACCATGCGAGACTCCAGTTAGAATCACATGCTTTGGAGAACATGAAACAGATAGTCAACCTTGTCATACAGCATGTCGACGACCTTGTGGACGAGAGTGCGGTAGACCCCTCGCATGCGGCAATCATTCATGCGAACTTTTATGCCACTTGTATGAATCTGACCCAGACTACCCAAACGTGCCTTACACTTGCAAACCATGTAACAGAGAGTGTTCAGTGATCCGTCCAGAGAAATGCACTCATAAGTGCGCAAAACGCGGCTGCCACCCAGGCCCGTGCCCTCCCTGTGATACTCTAGAACGAGTACCATGTTATTGTGGTATTACAGACCTTTATTTACGCTGTCGTGAATTATCAACGGCAACGGACGAAATGCTCAGTTGTAAACAACAATGCTCAAAAAATCTAGACTGCGGTCATCGATGTAAGAATTTATGTCATTCCGGGCCCTGTGGGCTAAATCAGACTTGCATTAAAAAGACTAAAATACACTGCCCTTGTGGCAATTTGAAGAAAGAGGCCCCATGTAATTCAGTTCGGAGAGGAGATGTATCTATTAAATGTGACGAAAGCTGTAATGCTAAAAAAGTAGCTGCAAAATTAGAAAGGGAAAAGGAAGAGAAGCGATTAAGAGAGTTAGAGGAAGAGAGAAATCGTAAAGAATTAGAAGAATATGAATGGAAATTGAGCGGGAAAAAGAAGAAATACAAAGAGAAAAGAGTCATTGTCAATAAAGATGATCGAAACTTTTTGCAGAAATATTGGGTTCCTACTTTATCAGTACTGACAGTTATCCTAGCtggtttttattacattttcaatgtTTAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKVMKEVSSSEDDEPFDQNVLDGVFQSYWRGGGDKQMLNRTKNLLEEAISGRSVTCLICIGSIKRVDAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESQGPIAVFKPKKIEWCCPKCRQSYSKEEVPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSIGDNCMHKCLLLCHPGPCPPCPQTVNGICYCGKERKKVRCSAAKWSCLQQCKKLLPCKSHSCENICHVGDCPPCNYSSLQSCQCGAEKTKRPCNDLKWQCTKQCNKPFSCGYHKCDKICHTGGCGPCPNSGVMSCPCGANQRFIQCPDSIETCVGTCGKKHDDCEHNCPAKCHKGPCPPCQVLIEKKCQCSTHTRSLPCSKEFRCETKCRGTRLCGKHGCGKKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETYVTVPCGREKHTKPPKCHLPCKIKYKCGHIDENKHTCHFGDCPPCKAICNKVYEKCSHNCTAVCHEYVLVVFKQVEKPATPWEVQPPKSKIVALDCPPCETPVRITCFGEHETDSQPCHTACRRPCGRECGRPLACGNHSCELLCHLYESDPDYPNVPYTCKPCNRECSVIRPEKCTHKCAKRGCHPGPCPPCDTLERVPCYCGITDLYLRCRELSTATDEMLSCKQQCSKNLDCGHRCKNLCHSGPCGLNQTCIKKTKIHCPCGNLKKEAPCNSVRRGDVSIKCDESCNAKKVAAKLEREKEEKRLRELEEERNRKELEEYEWKLSGKKKKYKEKRVIVNKDDRNFLQKYWVPTLSVLTVILAGFYYIFNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00802512;
90% Identity
iTF_00843994;
80% Identity
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