Epro023034.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000217.1:200624-218239[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00014 0.011 17.4 1.5 1 23 409 431 409 431 0.96
2 20 0.0067 0.54 12.1 0.6 1 20 437 456 437 459 0.94
3 20 4.8e-05 0.0038 18.8 4.6 1 23 478 500 478 500 0.98
4 20 0.0003 0.024 16.3 4.7 1 23 506 528 506 528 0.99
5 20 5.9e-05 0.0048 18.5 5.3 1 23 534 556 534 556 0.97
6 20 1.3e-05 0.001 20.6 7.1 1 23 562 584 562 584 0.97
7 20 1.1e-06 9.2e-05 23.9 2.9 1 23 590 612 590 612 0.97
8 20 0.00016 0.013 17.1 6.7 1 23 618 640 618 640 0.97
9 20 3.1e-05 0.0025 19.4 6.4 1 23 646 668 646 668 0.98
10 20 7.8e-07 6.3e-05 24.4 1.9 1 23 674 696 674 696 0.98
11 20 8e-05 0.0064 18.1 7.9 1 23 702 724 702 724 0.98
12 20 4e-05 0.0032 19.0 6.4 1 23 730 752 730 752 0.98
13 20 2.1e-05 0.0017 19.9 5.4 1 23 758 780 758 780 0.98
14 20 1.2e-05 0.00098 20.7 6.0 1 23 786 808 786 808 0.97
15 20 3.5e-05 0.0028 19.2 7.1 1 23 814 836 814 836 0.97
16 20 4.9e-06 0.00039 21.9 6.0 1 23 842 864 842 864 0.98
17 20 0.00022 0.018 16.7 10.0 1 23 870 892 870 892 0.97
18 20 2.2e-06 0.00017 23.1 4.0 1 23 898 920 898 920 0.97
19 20 0.0012 0.094 14.4 0.3 1 23 927 949 927 949 0.96
20 20 0.05 4.1 9.3 5.1 1 23 959 981 959 981 0.99

Sequence Information

Coding Sequence
ATGAATCCTGAGCATCACAATATCAACACGGGTGGCGGCCAGCCCCCAGGAAATTCAGAGCAACAGCAGCAGACTGCCAATCTCACCCCGACGACGTCTGCTACCGACCTCCGAGTCAACTCGGCGGCAGTAAACGTCGCTTTGTCTAGCGTCGCGAAATACTGGGTGTTTACAAATCTGTTCCCGGGCCCCATACCGCAAGTGTCGGTGTATGGTCTACCCACCGGAACGAGGATAGAAAATGGGAAACCAGTGCAGGATCTGGGTCAAGCCCATGCAAGCATACTCAATGGTGATCCCAACATTATACTTGGACACCCGGGACAGACGCAAGTCACTGTCTCGGCTGCACAACAGTTACCACAGATCATAGCCACACAAACACAGACCCATGatGCTCTAGCCCATGCTCAGCAGCAAGAGCTAGCATCCCAGCAGGGCGGCACTACTCAGGTCACGGCTAACTCGGGTCAAACCCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACACCATAACATTGATATGGTAAATCATGTGgGTCACCACTCCCAGCAACATATAATGCAGCAACAGTTGATGGCAGCGACTCGGCCAGAGCACTCCAACCAGCAGATCCAACTAACCGTGAGTGAAGACGGCATCGTGACCGTGGTGGACCCAGGAGGAGGCAAGTTAGTGGACAAAGAGGAGCTACACGAAGCCATCAAGATGCCAGGGGCAGACCACACTCTCACTGTACATCAATTGCAGCAAATAGTTGGGCAACAGGTTCTTGAGAACGTAGTCCGCATCGAACAAGCGACGGGGGAACCGGCGAACATTCTCGTAACCCAAAACGCCGACGGAACGACTTCCATAGAAGCCAGTGCTGCGGACCCGCTAGCTGTCGTGAAAGACGAGAAAAGCGTGTCCAAAATAGAGACGGCGCATTTTGCGTTACCTGCTGAGATAAAGGACCTTAAAGGCATCGATTTAAAGAGTGTGGGAGCAATGGGGATGGAAGGAGCTGTGGTGAAGATATCAGCGGGAGCCGCGGAGCACGACATGCACGCCATGTACAAAGTCAACGTAGAGGATTTGTCCCAACTGTTGGCTTACCATGAAGTTTTCGGCAAGCTCAATGCTGACGGACAGCCCCAAGCCAAAGTAATAGGTGAAGTGGAGGTGGAAGCGGGAACTAGTGCTGCCATGTCCGCCGAGGAAAACTCGCCCGGACACCATGCCTGTGATATTTGTGGGAAAATATTCCAATTTCGATACCAACTTATTGTTCATAGACGTTACCATGGCGAAAGAAAACCGTTCACGTGTCAAGTATGCGGTTCGGCCTTCGCCAATCCCGTGGAGTTGTCGAGACACGGGAAATGCCATCTTGccggtgacccagcggacaggACCGCCAAACGGTTGACCCAAGACAAGCCCTATGCGTGTACGACCTGCCATAAAACTTTCGCACGCAAAGAGCACCTTGACAACCATGTCCGCAGTCACACTGGAGAGACCCCGTACAGATGTCAATTTTGCGCAAAGACCTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCATCGCTGCGACATTTGCAAGAAAAGCTTCACGAGGAAAGAGCACTTTATGAACCACGTCATGTGGCATACagGTGAAACGCCACATCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGCCAACCATATGAGATCACATACGAATGATACCCCCTTCCGCTGCGAACTCTGTGGCAAGTCTTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACCGGCGAAACACCCCACCGCTGCGACTTCTGCTCCAAAACCTTCACCCGCAAAGAGCATCTCCTGAACCACGTTCGACAACACACGGGCGAGTCCCCGCACCGATGTAACTACTGTTCCAAGTCGTTCACGCGGCGCGAACACCTCGTCAACCACGTGCGTCAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCCAAGGCCTTCACCCGGAAGGACCACTTAGTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAAGTGCTCGTTCTGCACGAAGTCGTTCACGCGCAAGGAGCACCTCACCAACCACGTCCGCCAGCACACCGGCGAGTCCCCGCACCGGTGCACATACTGCGCCAAGTCCTTCACCAGAAAGGAGCACCTCAACAACCACGTCAGACAGCACACGGGGGAAACGCCGCACAAGTGCACGTTCTGCCCGAAGGCGTACTCGAGGAAGGAGCACCTCAACAACCACATCAGACAACACACTGGCGACGCGCCTCATTCCTGCACCTATTGCAACAAGAGCTTCTCGCGGAAAGAGCATCTTGTCAATCATGTTCGGCAACACACGGGCGAGACGCCGTTCAAGTGCACGTACTGTTCGAAGTCGTTCTCCCGCAAGGAGCACCTTACGAACCACGTACACTTGCACACCGGCGAGACGCCCCACAAGTGCCCCTTCTGCACCAAGACCTTCTCCAGGAAGGAGCATCTCACCAATCACGTTAGGATACACACCGGCGAGTCGCCGCACCGATGCGAGTTCTGCCACAAAACGTTCACTCGGAAAGAACATCTGACGAACCACCTCAAGCAGCACACCGGGGATACGCCGCACTCCTGTAAAGTCTGCTCCAAGGCGTTCACCCGGAAAGAACATCTTGTGGCGCATATGAGATCGCACAGTTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAAGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAagggcggcgccggcgcccgccCGTTCCGCTGCGACGTTTGCTCCAAGGACTTCATGTGCAAAGGTCACCTGGCATCGCACCGACGCACGCACGCGGACGCGCCGGCGGACGGCGCGGCGGCCGACGCGCCCGCCGAGGACTGCGGGGACTGCGTCAAGTGTGAGAAGGACCCCACCGACCAGCCCGAAAGGAAACACGAGATCAGACCTGCAGCAGAAAGTAGACCGGCCGAAAGCGCCGTCGCACAAAACCCCCAAGCTAACGCAACTGTGATGCAAATTACTAGCCAACAAGTGAGAGCGGGCACAACGGTGGGGCTGGAAACGGCAGCGAGCGGCACGTTCGCGGCCTCGCACCTCACgcacggcggcgccggcgccggcctcGCCCACCACCCCGTCACCGTCAACTACTAA
Protein Sequence
MNPEHHNINTGGGQPPGNSEQQQQTANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHPGQTQVTVSAAQQLPQIIATQTQTHDALAHAQQQELASQQGGTTQVTANSGQTHQQVPNNRVEFVHHNIDMVNHVGHHSQQHIMQQQLMAATRPEHSNQQIQLTVSEDGIVTVVDPGGGKLVDKEELHEAIKMPGADHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNADGTTSIEASAADPLAVVKDEKSVSKIETAHFALPAEIKDLKGIDLKSVGAMGMEGAVVKISAGAAEHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVIGEVEVEAGTSAAMSAEENSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDPADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAYSRKEHLNNHIRQHTGDAPHSCTYCNKSFSRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHSCKVCSKAFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGGAGARPFRCDVCSKDFMCKGHLASHRRTHADAPADGAAADAPAEDCGDCVKCEKDPTDQPERKHEIRPAAESRPAESAVAQNPQANATVMQITSQQVRAGTTVGLETAASGTFAASHLTHGGAGAGLAHHPVTVNY