Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000018.1:1559524-1589067[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00015 0.015 17.2 1.5 1 23 403 425 403 425 0.96

2 20 0.0073 0.71 11.9 0.6 1 20 431 450 431 453 0.94

3 20 5.2e-05 0.005 18.7 4.6 1 23 472 494 472 494 0.98

4 20 0.00033 0.032 16.2 4.7 1 23 500 522 500 522 0.99

5 20 6.4e-05 0.0063 18.4 5.3 1 23 528 550 528 550 0.97

6 20 1.4e-05 0.0014 20.5 7.1 1 23 556 578 556 578 0.97

7 20 1.2e-06 0.00012 23.8 2.9 1 23 584 606 584 606 0.97

8 20 0.00018 0.017 17.0 6.7 1 23 612 634 612 634 0.97

9 20 3.4e-05 0.0033 19.2 6.4 1 23 640 662 640 662 0.98

10 20 8.5e-07 8.3e-05 24.3 1.9 1 23 668 690 668 690 0.98

11 20 8.6e-05 0.0084 18.0 7.9 1 23 696 718 696 718 0.98

12 20 4.4e-05 0.0043 18.9 6.4 1 23 724 746 724 746 0.98

13 20 2.3e-05 0.0022 19.8 5.4 1 23 752 774 752 774 0.98

14 20 1.4e-05 0.0014 20.5 5.9 1 23 780 802 780 802 0.97

15 20 3.8e-05 0.0037 19.1 7.1 1 23 808 830 808 830 0.97

16 20 5.3e-06 0.00052 21.8 6.0 1 23 836 858 836 858 0.98

17 20 0.00024 0.023 16.6 10.0 1 23 864 886 864 886 0.97

18 20 2.3e-06 0.00023 22.9 4.0 1 23 892 914 892 914 0.97

19 20 0.0013 0.12 14.3 0.3 1 23 921 943 921 943 0.96

20 20 0.11 11 8.2 5.5 1 23 953 975 953 975 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00015	0.015	17.2	1.5	1	23	403	425	403	425	0.96
2	20	0.0073	0.71	11.9	0.6	1	20	431	450	431	453	0.94
3	20	5.2e-05	0.005	18.7	4.6	1	23	472	494	472	494	0.98
4	20	0.00033	0.032	16.2	4.7	1	23	500	522	500	522	0.99
5	20	6.4e-05	0.0063	18.4	5.3	1	23	528	550	528	550	0.97
6	20	1.4e-05	0.0014	20.5	7.1	1	23	556	578	556	578	0.97
7	20	1.2e-06	0.00012	23.8	2.9	1	23	584	606	584	606	0.97
8	20	0.00018	0.017	17.0	6.7	1	23	612	634	612	634	0.97
9	20	3.4e-05	0.0033	19.2	6.4	1	23	640	662	640	662	0.98
10	20	8.5e-07	8.3e-05	24.3	1.9	1	23	668	690	668	690	0.98
11	20	8.6e-05	0.0084	18.0	7.9	1	23	696	718	696	718	0.98
12	20	4.4e-05	0.0043	18.9	6.4	1	23	724	746	724	746	0.98
13	20	2.3e-05	0.0022	19.8	5.4	1	23	752	774	752	774	0.98
14	20	1.4e-05	0.0014	20.5	5.9	1	23	780	802	780	802	0.97
15	20	3.8e-05	0.0037	19.1	7.1	1	23	808	830	808	830	0.97
16	20	5.3e-06	0.00052	21.8	6.0	1	23	836	858	836	858	0.98
17	20	0.00024	0.023	16.6	10.0	1	23	864	886	864	886	0.97
18	20	2.3e-06	0.00023	22.9	4.0	1	23	892	914	892	914	0.97
19	20	0.0013	0.12	14.3	0.3	1	23	921	943	921	943	0.96
20	20	0.11	11	8.2	5.5	1	23	953	975	953	975	0.99

Sequence Information

Coding Sequence: ATGAATTCGGAGCATCACAATATAAACACGGGTGGCGGCCAGCCCCAAGGAAATTCAGAGcagcagcagcagacgGCGAATTTGACCCCGACGACGTCTGCCACGGACCTGCGAGTGAACTCGGCGGCCGTAAACGTCGCTTTGTCTAGCGTCGCAAAGTACTGGGTGTTTACAAATCTTTTCCCGGGGCCTATACCGCAAGTGTCGGTATATGGGCTGCCCACTGGAACGAGAATAGAAAATGGGAAACCAGTGCAGGACCTTGGTCAAGCCCATGCAAGCATACTCAATGGCGATCCCAACATTATACTTGGACATCCGGGACAGACCCAAGTTACTGTCTCGGCGGCGCAACAGTTACCACAGATTATTGCCACACAGACACAAACACATgATGTCCTAGCTCATGTGCAGCAACAAGAGCTACAGCAGGCCACGGTCAACTCCGGACAGGTGACGACTAACACGGGTCAAACAACCCATCAGCAGGTAGCCAATAATCGGGTCGAGTTTGTACACCATAACATTGATATGGGTCACCACTCGCAACAACACATAATGCAGCAGCAGCTAATGGCGGCGACGCGCCCAGACCACTCCAACCAGCAGCTAACTGTGAGTGAAGACGGGATCGTCACCGTGGTGGACCCGGGCGGGGGCAAGCTTGTGGATAAAGAGGAACTGCATGAGGCGATCAAGATGCCGACGGACCACACCCTCACTGTGCATCAGCTGCAACAAATTGTGGGGCAACAGGTGCTAGAAAACGTGGTCCGTATCGAGCAAGCCACCGGCGAGCCGGCGAACATTCTCGTGACGCAGAACCCGGACGGCACCACGTCCATCGAGGCCAGCGCCGCGGACCCGCTCGCCGTCGTCAAGGACGAGAAGAACGGCTCCAAGATAGAGACCGCGCACTTCGCTCTGCCCGCCGAGATCAAGGACCTTAAGAGCATCGACTTAAAGAGTGTAGGAGCGATGGGGATGGAAGGAGCCGTAGTGAAGATATCAGCGGGAGCCTCGGACCACGACATGCACGCCATGTACAAGGTCAACGTGGAAGATCTGTCGCAGCTGCTGGCCTACCACGAGGTCTTCGGCAAGCTCAATGCTGACGGGCAGCCCCAAGCCAAAGTAATAGGAGAAGTGGAGGTAGAGGCGGGCACTAGCGCCGCCATGTCCGCCGAGGAGAATTCGCCCGGACACCATGCCTGTGATATTTGTGGGAAAATCTTTCAATTTCGATACCAACTCATTGTCCATAGACGGTACCACGGTGAAAGGAAACCTTTCACGTGTCAAGTGTGCGGCTCCGCCTTCGCCAATCCTGTGGAGCTGTCAAGACACGGGAAATGCCATCTTGCCGGCGACTCCGCAGACAGGACCGCCAAGCGGTTGACGCAGGACAAGCCGTACGCGTGCACGACCTGCCATAAAACGTTCGCGCGCAAGGAGCACCTCGACAACCACGTGCGCAGCCACACCGGGGAGACGCCCTACAGATGTCAATTCTGCGCGAAGACCTTCACCCGCAAAGAGCATATGGTGAACCACGTCCGCAAGCACACGGGCGAGACGCCGCATCGCTGCGACATCTGTAAGAAAAGCTTCACGCGGAAGGAGCACTTCATGAACCATGTCATGTGGCATACAGGTGAAACGCCACACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCATTTAGCGAACCATATGAGATCACATACGAATGATACCCCATTCCGCTGCGAACTCTGTGGGAAGTCTTTCACAAGAAAGGAACACTTCACCAATCACATACTGTGGCATACTGGAGAAACGCCCCACCGCTGCGACTTCTGCTCGAAAACCTTCACGCGCAAAGAGCACCTCCTGAACCACGTGCGGCAGCACACGGGCGAGTCTCCGCACCGCTGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTTGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGGAAGGACCACCTAGTGAATCACGTGCGACAGCACACTGGCGAGTCTCCGCACAAATGCTCGTTCTGCACCAAGTCGTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAGGTGCACCTACTGCGCCAAGTCGTTCACTAGGAAGGAGCATCTCAATAATCACGTCAGACAGCATACGGGGGAAACGCCGCACAAGTGCACGTTCTGCCCGAAGGCGTACTCGCGCAAGGAGCACCTCAACAACCACATCAGGCAGCACACGGGCGACGCGCCGCACTCGTGCTCCTACTGCAACAAGAGCTTCTCCAGGAAGGAGCATCTCGTCAACCACGTTCGGCAACACACGGGCGAGACGCCTTTCAAGTGCACCTACTGCTCGAAGTCGTTCTCCCGTAAGGAGCACCTCACGAACCACGTGCACCTGCACACGGGCGAGACTCCGCACAAGTGCCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCACCTCACCAACCACGTCAGGATACACACGGGCGAGTCGCCACATCGCTGCGAGTTCTGCCATAAAACGTTCACGCGCAAGGAGCACCTCACCAACCACCTCAAGCAGCACACCGGAGACACGCCGCACTCCTGCAAGGTCTGCTCCAAGGCATTCACCCGCAAGGAGCACCTCGTCGCGCACATGAGATCGCACAGTTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAAGaacgcgggcgcagcgcggcccTTCCGCTGCGAGCTCTGCTCCAAGGACTTCATGTGCAAAGGTCACCTGGCGTCGCACCGGCGCACGCACGCGGCGGGCGCGGACGCggacgcgggcgcgggggcgggcgcgGAGGCGGAAGCGGACGGcgcagcgggcgcgggcgcgggcgcgggcgcgggcgcggagcccGAGGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACGAGCCCGAGCGGAAACACGTACtcagACCGGCTGCGGACGCGAGGCCGGCTGAAAGCGCTGTAGCACAAAACCCCCAAGCTAATGCAACTGTGATGCAAATTACCAGCCAAGTAAGTTATCATCTACATACAAGTTCGCGCGCCAGCAGGTGTAGGACTGGACTCGGCCGGCGCCGCTTTCGCGCACCCGGTCACCGTCAACTACTAGCCCGAGGGCTGCTATCCCTGCTAGCCGCGACACCACTAGCCCGAGGGCTGCTATCCCTGCTAGCCACGACACTACTAGTCCTGCTAGCCACGACACTACTAGTCCTGCTAGCCGCGACACTACTAGCCCTGCTAGCCGCGACACCACTAGCCCGAGGGCTGCTGGCCCTTCTAGCCACGACACTAGCCCGCAGGCTACTGGCCATACTAGCCACTACTAGCCTGCCTAAGAAATACTACCACACATGTCACATTATATCCTTACGTTGGCATTTGTTGGGGCAGAGGAGAGGGTGGCGCGAGTTATTTGATAAATACGGCCGGCAGCCGAAAATGTGA
Protein Sequence: MNSEHHNINTGGGQPQGNSEQQQQTANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHPGQTQVTVSAAQQLPQIIATQTQTHDVLAHVQQQELQQATVNSGQVTTNTGQTTHQQVANNRVEFVHHNIDMGHHSQQHIMQQQLMAATRPDHSNQQLTVSEDGIVTVVDPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAVVKDEKNGSKIETAHFALPAEIKDLKSIDLKSVGAMGMEGAVVKISAGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVIGEVEVEAGTSAAMSAEENSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDSADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAYSRKEHLNNHIRQHTGDAPHSCSYCNKSFSRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHSCKVCSKAFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNAGAARPFRCELCSKDFMCKGHLASHRRTHAAGADADAGAGAGAEAEADGAAGAGAGAGAGAEPEDCGDCVKCEKDEPERKHVLRPAADARPAESAVAQNPQANATVMQITSQVSYHLHTSSRASRCRTGLGRRRFRAPGHRQLLARGLLSLLAATPLARGLLSLLATTLLVLLATTLLVLLAATLLALLAATPLARGLLALLATTLARRLLAILATTSLPKKYYHTCHIISLRWHLLGQRRGWRELFDKYGRQPKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289860;
90% Identity: iTF_00680814;
80% Identity: -