Cspo027197.2
Basic Information
- Insect
- Catocala sponsa
- Gene Symbol
- retn
- Assembly
- GCA_963564715.1
- Location
- OY751344.1:8896826-8902783[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-20 2e-16 61.5 0.0 11 89 3 79 1 79 0.93 2 2 4.8 2.1e+04 -2.6 0.0 25 37 209 221 169 223 0.50
Sequence Information
- Coding Sequence
- ATGACCAAAATGTTGTCAACATTTGGAACTCCAATCAATCGATTGCCAATAATGGCAAAGTCTGTGCTTGATCTGTACGAGCTGTACAACTTGGTGATCGCTCGCGGAGGACTCGTGGAGGTGATCAACAAGAAACTGTGGCAGGAGATTATCAAGGGACTCAGACTGCCGTCCTCTATAACCTCAGCAGCATTTACGTTACGCACACAATACATGAAATATCTGTATGATTATGAGTGCGAGAAGAAAAATCTATCGACTCGGAGCGAGCTGGATGCTGCCATTGAGGGCAACAAGCGCGAGGGGAGGCGCGCTTCGGGACAGTATGACGCGCAAGCTGCATTGGCTATGCCGCCTCTGAATCGTGGCGTGCCGGCATCCTTGGCGCAGTTGTCGCAGCACATGCAGCCTCTGTCTCTCTCGCTCGGCGGCGTAGCGCCGCGTCTGCCGCCGCTACCGCCGCACGCGCCGCATCTGGCGCAGCATGACATCGAATACAGGGTTCGCGAGTACATGAAGATGATTCAACAGCAACGGGAGCTCATGAGGAACGGTTCTGAATCTCCGCCAAGTGTAAACGGCCCAGCGCCAATCATGTCGCCGCGTGACGCGGCCGCTCTCAGCGCCATCGACGTATCGCGCCTGACTCTCTGGTCACTctacaacaacaataataacaacagTCCACAGCCTGACCTCGAGCCACAGCGCGAGGCACTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTCAGGGGGCAAGCGTGAGGCGTGTCGGTCGCCGGCGCCGCCTGCCAAGCGCCGCACGCCGCGGCCCGCGTCGCCGCGCGCGTCGCCACCGTCACCGCACTCCGGTGCCGGCGCCGGCGCACCCGCAATCGGCGCGCACGCAGCCCTCGCCGCGCCGCTCGCGCGCGCCTCGCGCCTCGACGCGTCGCCGCCGCCGCACGCGCTCAACGGACCCAGCGCTAATGGAGTCAACGGTGCCGCCTTTAAGATCACCACTAGAGGTGATGCCAGCACAGGTGACCAGCAGCTAGTGGTGTCAATAGAACTGAACGGCGTCACGTACGAGGGCGTACTGTTCCCCGCCAACAACTCACAGAACGGACACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MTKMLSTFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPAPPAKRRTPRPASPRASPPSPHSGAGAGAPAIGAHAALAAPLARASRLDASPPPHALNGPSANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -