Dtrs007051.1
Basic Information
- Insect
- Drosophila tristis
- Gene Symbol
- -
- Assembly
- GCA_018150885.1
- Location
- JAECWT010000001.1:8940943-8942878[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-17 1.3e-13 50.2 0.0 2 45 341 384 340 384 0.95 2 3 0.0046 9.8 5.7 0.0 27 37 413 423 409 428 0.90 3 3 2.5e-20 5.3e-17 61.0 0.0 2 44 450 492 449 493 0.95
Sequence Information
- Coding Sequence
- ATGAATCACCTAAAATGGATGGGGCACTCGTCCACAATAATGGACCTACAACGCTCCCTGCGCAACGATATCCACACATGCGAGGTTGTGCTGGCCGCCAAAGACGGCTTCAGTGTACGCGCGCATTCCTTCGTGCTCAGCACATGCAGCGATCTGATGCGGAATCTCCTGGTGGACGTCCCGCCGGGCCATGAGGCCACCATAGTGCTGCCCGATATCCGAGGCGAACTGCTCGAAAGTATGTTGTCGTTCATCTACATGGGCGAAACAGGCCTGCCCTCGGTGCTACTCACCGAGTTTCTGGAGGCCATCAACCTATTGGGCATCAAATCCGCCATTAGCTTCGAGTGCAATCCCTCCTCCAACGTGGACGTAGGCGCTGGCGCTTTGGCGGTGGAGGCAGCTAAATCAATCAGCGGCCTGCAAATCGCCCAAGCCGAGCTAATTGACGAAGAGGAGGAGGGACAGATGGCTGTGGCAGCCGCAGTCATGGCTGAAGAGCAGCCCCATCAGCCAGCAGCACACACCAGCCGTCCGCTAGAGTTTCTCGATGTGTACAACGAGACGCCAAAGATCACGTACTCCATTGAGCACATGGGCGGCCACTCGAACGGCAATCAGTTTATTCTAACCGAGAATACGGGAGCATTTACAATCACACAGTCGGCGTCCAGTTTGTCCAAGCTGGAGACCTCCGAAAATGCAAACAGTGTCGGCGAGGTGGATATGGTGGAGGATGACGCTGAAGCGGATACGACCGAAGAGGAGCCGGAAACACAAATACTCGAGGAGGAATATCCCTCAGATCCATTGATTGAGATAAACGCCAGTGCAGATATGGACGACGATGAGATGCACGAGGATCTGGTGGATGAGGAGATGCTGGAAGTGAAGCCGCGCAAGCTGGCTGTGGCCAAGCCGAGAGGCCGACGCCCCAATCGGACAAAGAATATGAAGCGACCGCCGCCCAGGCAGCAGCCACAGTTTCTCACCCTCAAACACGAAGGCAAAGATGACATTAACGATGCTCTGGATCTCGCGGCTGACGCTGTAATACTCGAGGGTCTGAGTCTGCAGAAGGCTGCCGATCGTTATGATATCTCGAAGACTGTTTTGTGGCGTCGTGTGCGCACCAATCCCGCATATATGCGAAGCAACCGCGAGAGGCCATCATTGTCTGAGGCGTACGAAAGACTTAAAACCGGCGACTCGCTCAAGAACATCAGCCAGGATCTGGGCATACCCATGTCCACCCTACATCGACACAAAGTTCGACTGTCGGCGCAGGGTCGCCTGCCCGACTTTGTCGCCTGCCGCCGCCGTGACACTACCCCCAAGGACGAGCTTCGCGAGAAACTGGCCAAGGCCGTCCATGCCTGCCTCAAAGAGGGTATGTCGCAGAACCATGCGGCCAATCTGTTCGAGATACCCAAGAGCACGCTCTGGCGTCACCTACAGCGTCATATGGCCCACTCGGATCGTAAGGTAAAGAAGGAGGAACAGGATGACTATGATGAGGAGATTCTGAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDLQRSLRNDIHTCEVVLAAKDGFSVRAHSFVLSTCSDLMRNLLVDVPPGHEATIVLPDIRGELLESMLSFIYMGETGLPSVLLTEFLEAINLLGIKSAISFECNPSSNVDVGAGALAVEAAKSISGLQIAQAELIDEEEEGQMAVAAAVMAEEQPHQPAAHTSRPLEFLDVYNETPKITYSIEHMGGHSNGNQFILTENTGAFTITQSASSLSKLETSENANSVGEVDMVEDDAEADTTEEEPETQILEEEYPSDPLIEINASADMDDDEMHEDLVDEEMLEVKPRKLAVAKPRGRRPNRTKNMKRPPPRQQPQFLTLKHEGKDDINDALDLAADAVILEGLSLQKAADRYDISKTVLWRRVRTNPAYMRSNRERPSLSEAYERLKTGDSLKNISQDLGIPMSTLHRHKVRLSAQGRLPDFVACRRRDTTPKDELREKLAKAVHACLKEGMSQNHAANLFEIPKSTLWRHLQRHMAHSDRKVKKEEQDDYDEEILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611458; iTF_00564034; iTF_00563821; iTF_00474425; iTF_00474618; iTF_00514999; iTF_00603265; iTF_00603467; iTF_00601165; iTF_00487408; iTF_00600976; iTF_00487218; iTF_00514811; iTF_00480966; iTF_00473701; iTF_00471752; iTF_00471534; iTF_00480784; iTF_00473914; iTF_00484542; iTF_00484365; iTF_00517631; iTF_00517841; iTF_00535964; iTF_00536167; iTF_00574731; iTF_00580872; iTF_00580634; iTF_00574942;
- 90% Identity
- iTF_00514999;
- 80% Identity
- iTF_00611458;