Dbif009683.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- -
- Assembly
- GCA_009664405.1
- Location
- CM019043.1:29468942-29470444[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-17 3.4e-14 52.0 0.0 2 45 334 377 333 377 0.96 2 3 0.0027 4.9 6.7 0.0 25 37 404 416 392 421 0.87 3 3 1.7e-20 3.1e-17 61.7 0.0 2 43 443 484 442 486 0.95
Sequence Information
- Coding Sequence
- ATGGGGCACTCGTCCACAATAATGGACCTACAACGCTCCCTGCGCAACGATATCCACACATGCGAGGTTGTGCTGGCCGCCAAAGACGGCTTCAGTGTGCGCGCCCATTCCTTCGTGCTCAGCACATGCAGCGATCTCATGCGGAATCTCCTGGTGGATGTCCCTCCTGGCCACGAAGCCACCATAGTGCTGCCCGATATCCGAGGCGAACTGCTGGAAAGTATGCTGTCGTTCATCTACATGGGCGAAACAGGCCTGCCCTCAGTGCTGCTCACCGAGTTCCTGGAGGCCATCAACCTATTGGGCATCAAGTCCGCCATTAGCTTCGAGTGCAATCCCTCCTCCAGCGTGGACGTGGGCGCTGGCGCTTTGGCGGTGGAGGCAGCTAAATCAATTAGCGGCCTGCAAATCGCCCAGGCCGAGCTGATGGACGAAGATGAGGAGGGACATCCTCAGATGGGTGTGGCAGCCGCAGTCATGGCCGATGAGCATCCGGCAGCACACACCAGCCGTCCGCTGGAGTTTCTCGATGTGTACAACGAGACGCCAAAGATCACGTACTCCATTGAGCATATGGGCGGCCACTCGAATGGCAATCAGTTTATTCTCACGGAGAACACGGGAGCATTCACAATCACACAGTCGGCGTCCAGTTTGTCCAAGCTGGAGACATCCGAAAACGCGACCAGTGGCGCCGAGCTGGATATGGTGGAGGATGACGGGGAAGCGGACACCACCGAAGAGGAACCGGAAACACAAATGCTCGAGGAAGAATATCCATCAGATCCCTTGATTGAGATGAACGCTAGTGCAGATATGGACGACGATGAGATCCCAGAGGAGCTGGTGGATGAGGACATGCTGGACGTAAAGCCGCGCAAACTGGCTGTGGCCAAGCCGAGAGGACGACGCCCCAATCGGACCAAGATTTTGAAGCGACCGCCGCCCAGACAACAGCCACAGTTTCTCACCCTCAAACAAGAAGGCAAAGATGACATTAACGATGCCCTGGATCTCGCCGCCGACGCTGTTATCCGCGAGGGTCTAAGTCTGCAGAAGGCTGCCGATCGCTACGATATCTCAAAGACTGTCTTGTGGCGTCGTGTGCGCACCAATCCCGCCTATATGCGAAGCAACCGCGAGAGGCCATCATTGGCCGAGGCCTACGAAAGACTCAAAACCGGCGACTCCCTCAAGAACATCAGCCAGGAACTGGGCATACCTATGTCCACGCTACATCGACACAAAGTTCGACTGTCCGCGCAGGGACGCCTGCCAGACTTTGTCGCCTGCCGCCGCCGTGACACTACCCCCAAGGACGAGCTTCGCGAGAAGCTGGCCAAGGCCGTCCATGCCTGCCTCAACGAGGGTATGTCACAGAACCATGCGGCGAATCTGTTCGAGATACCAAAGAGCACGCTCTGGCGTCATCTACAGCGTCGGATGTCCCTCGCGAACCGCAAGGTAAAGAAGGAGGAACAGGATGATGACTACGACGAATAG
- Protein Sequence
- MGHSSTIMDLQRSLRNDIHTCEVVLAAKDGFSVRAHSFVLSTCSDLMRNLLVDVPPGHEATIVLPDIRGELLESMLSFIYMGETGLPSVLLTEFLEAINLLGIKSAISFECNPSSSVDVGAGALAVEAAKSISGLQIAQAELMDEDEEGHPQMGVAAAVMADEHPAAHTSRPLEFLDVYNETPKITYSIEHMGGHSNGNQFILTENTGAFTITQSASSLSKLETSENATSGAELDMVEDDGEADTTEEEPETQMLEEEYPSDPLIEMNASADMDDDEIPEELVDEDMLDVKPRKLAVAKPRGRRPNRTKILKRPPPRQQPQFLTLKQEGKDDINDALDLAADAVIREGLSLQKAADRYDISKTVLWRRVRTNPAYMRSNRERPSLAEAYERLKTGDSLKNISQELGIPMSTLHRHKVRLSAQGRLPDFVACRRRDTTPKDELREKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRMSLANRKVKKEEQDDDYDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611273;
- 90% Identity
- iTF_00514999;
- 80% Identity
- iTF_00487408;