Dath007909.1
Basic Information
- Insect
- Drosophila athabasca
- Gene Symbol
- -
- Assembly
- GCA_008121215.1
- Location
- CM017796.1:49209339-49210982[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-17 6.8e-14 51.0 0.0 2 45 350 393 349 393 0.95 2 3 0.015 32 4.1 0.0 27 37 422 432 419 437 0.89 3 3 6.3e-19 1.3e-15 56.5 0.0 2 42 459 499 458 501 0.94
Sequence Information
- Coding Sequence
- ATGAATCACCTGAAATGGATGGGGCACTCGTCCACAATAATGGACCTACAACGCTCTCTGCGCAACGATGTCCAAACATGCGAGGTTGTGCTTGCCGCCAAAGACGGCTTCAGTGTACGCGCGCATTCCTTCGTGCTCAGTACATGCAGCGATCTGATGCGGAATCTCCTGGTGGATGTCCCGCCAGGCCATGAAGCCACCATAGTGCTGCCCGATGTTCGGGGCGAACTGCTGGAAAGTATGTTGTCGTTCATCTACATGGGTGAAACAGCCCTGCCCTCGGTGTTGCTCAGCGAATTTCTGGAGGCTATCAACCTATTGGGCATCAAATCCGCCATTAGCTTCGAGTGTAATGCCTCCTCTAACGTGGACGTGGGCGCTAGCGCTTTGGCGGTGGAGGCAGCTAAATCAATCAGCGGCCTGCAGATTGCCCAAGCCGAGCTGATTGAAGAGGAGGATGACGAGGAGGGGCAGGCACAGATGGCTGTGGCAGCCGCAGTCCTGTCGGAAGAACAGCCCCATCAGTCAGCACACACCACCCGTCCGCTGGAGTTTCTCGATGTTTACAACGAGACGCCAAAGATTACGTACTCCATTGAGCACATGGGCGGCAACTCGAATGGCAATCAGTTTATTCTAACCGAGAATACGGGAGCATTTACAATCACACAGTCGGCGTCCAGTTTGTCCAAGCTGGAGACCTCAGAAAATGCCACCAGTGGCGGCGAGGTGGACATGGCGGAAGATGACGCGGAAGCGGACGCTGATACCACCGAAGAGGAGCCCGAAACACAAATACTTGAGGAGGAATATCCCTCAGATCCCTTGATTGAGATGGGAGCCGATGCAGATTTGGACGACGATGAGATGAACGAGGATCTGGTAGATGAGGAGATGCTGGAAGTGAAGCCGCGAAAACTGGCTGTGGCCAAACCGAGAGGCCGTCGCCCCAATCGAACAAAGACTGTGAAGCGAGCTGCGCCcagacaacagcaacaacaacaaccgaaGTTTCTCACTCTCAAAGCAGAAGGCAAAGATGACATTAACGATGCCCTGGATCTCGCGGCCGACGCTGTAATACTCGAGGGACTTAGTCTACAGAAGGCAGCCGATCGCTATGACATTTCGAAAACGGTTTTGTGGCGTCGTGTGCGTACAAACCCCTCGTATATGCGAAGCAACCGAGAGAGACCATCATTGTCTGAAGCGTACGAAAGACTTAAAATCGGTGACTCTCTAAAGAGCATCAGCCAGGATCTGAATATACCCATGTCAACCCTACATCGACACAAAGTTCGACTGTCGGCGGAGGGTCGCCTGCCTGAGTTTGTCGCCTGCCGCCGCCGTGACACTACACCCAAGGACGAGCTTCGCGAGAAACTGTCCAAGGCCGTCCATGCCTGCCTGAACGAGGGTATGTCGCAGAATCATGCGGCGAATCTGTTCGAAATACCCAAGAGCACACTCTGGCGGCACCTTCAGCGTTGCATGTCCGCAACGGACAGAAAAGTAAAGAAGGAGGAACAGGACGACTACGATGAGGAGATACTGAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDLQRSLRNDVQTCEVVLAAKDGFSVRAHSFVLSTCSDLMRNLLVDVPPGHEATIVLPDVRGELLESMLSFIYMGETALPSVLLSEFLEAINLLGIKSAISFECNASSNVDVGASALAVEAAKSISGLQIAQAELIEEEDDEEGQAQMAVAAAVLSEEQPHQSAHTTRPLEFLDVYNETPKITYSIEHMGGNSNGNQFILTENTGAFTITQSASSLSKLETSENATSGGEVDMAEDDAEADADTTEEEPETQILEEEYPSDPLIEMGADADLDDDEMNEDLVDEEMLEVKPRKLAVAKPRGRRPNRTKTVKRAAPRQQQQQQPKFLTLKAEGKDDINDALDLAADAVILEGLSLQKAADRYDISKTVLWRRVRTNPSYMRSNRERPSLSEAYERLKIGDSLKSISQDLNIPMSTLHRHKVRLSAEGRLPEFVACRRRDTTPKDELREKLSKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRCMSATDRKVKKEEQDDYDEEILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611273;
- 90% Identity
- iTF_00535964;
- 80% Identity
- iTF_00480966;