Dgua009804.1
Basic Information
- Insect
- Drosophila guanche
- Gene Symbol
- -
- Assembly
- GCA_900245975.1
- Location
- NW:5146206-5148748[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.9e-17 1.3e-13 50.0 0.0 2 45 391 434 390 434 0.95 2 3 0.0051 9.4 5.6 0.0 27 37 463 473 459 478 0.90 3 3 6.3e-20 1.2e-16 59.7 0.0 2 42 500 540 499 541 0.96
Sequence Information
- Coding Sequence
- atgcaaaaatgtccCCTTCTTATAATGGTAACTAAACTGTCCGttggtatattttatggcGTTCTTTTCTCGTTCTGTTTTCTGGAATTGCaagaattgaaattaaaacattttgaaacatTAAGAATACTTGGAAATAGGAAACAAACAATAATGAATCACCTGAAATGGATGGGACACTCGTCCACAATAATGGACCTACAACGTTCCCTGCGCAACGATGTCCACACATGCGAGGTTGTGCTGGCCGCCAAAGACGGCTTCAGTGTTCGTGCCCATTCATTCGTGCTCAGCACATGCAGCGATCTGATGCGAAATCTCCTGGTGGATGTCCCACCGGGCCATGAGGCCACCATAGTGCTGCCCGATATCCGAGGGGAACTGCTGGAAAGCATGTTGTCGTTCATCTACATGGGCGAAACGGGGCTGCCCTCGGTGCTGCTCAGCGAGTTTCTGGAGGCCATCAACCTATTGGGCATCAAGTCCGCAATTAGCTTCGAGTGCAATCCCTCCTCCAACGTGGACGTAGGCGCTGGCGCTTTGGCCGTGGAggcagcaaaatcaatcagCGGCCTGCAAATCGCCCAGGCCGAGCTGATtgacgaagaggaggagggacaggcacagatggctgtggcagccgcaGTCATGGCcgaggagcagccagcagcacacaccAGCCGTCCGCTGGACTTTCTCGATGTGTACAACGAGACGCCAAAGATCACGTACTCCATCGAGCACATGGGCGGCCACTCGAGCGGCAATCAGTTTATTCTAACCGAGAACACGGGAGCATTTACAATCACACAGTCGGCGACCAGCTTGTCCAAGCTGGAGACCTCCGAAACTGCGGCCAGTGTCGGCGATGTGGACATGATGGAGGATGACGCGGAAGCAGACACAACCGAAGAGGAGCCGGAAAACCAAATACTCGAGGAGGAATATCCCTCAGATCCCTTGATCGAGATGACAGGCGGCGGAGATCTGGAAGACGATGATATGCATGAGGATCTGGTGGATGAGGACATGCTGGATATAAAGCCGCGCAAGCTGGCGGTGGCCAAGCCAAGAGGCCGACGCCCCAATCGAACAAAGATCATGAAGCGAGCTCCGCccagacagcagccacagtttCTGACCCTCAAGCACGAGGGCAAGGATGACATTAACGATGCCCTGGATCTCGCGGCCGATGCCGTCATAATCGAGGGTCTCAGCCTGCAGAAGGCTGCCGATCGCTATGATATCTCGAAGACTGTCTTGTGGCGTCGTGTGCGCACCAATCCCGCGTACATGCGAAGCACCCGCGAGAGGCCATCGTTGTCGGAGGCGTACGAAAGACTCAAAACCGGTGACTCACTAAAGAACATCAGTCAGGATCTCGGCATACCCATGTCCACACTACATAGACACAAAGTTCGACTGTCGGCGCAGGGACGCCTGCCAGACTTTGTCGCCTGCCGCCGCCGTGACACCACCCCCAAGGACGAGCTTCGCGAGAAACTGGCCAAGGCCGTCCATGCCTGCCTCAACGAGGGTATGTCGCAGAACCATGCGGCGAATCTCTTCGAAATACCCAAGAGCACGCTCTGGCGTCACCTGCAGCGTAAGATGTCCGGTGCGGACCGCAAAGTCAAGAAGGAGGAACAGGATGACTATGAAGAGGAGATTCTGAACTAG
- Protein Sequence
- MQKCPLLIMVTKLSVGIFYGVLFSFCFLELQELKLKHFETLRILGNRKQTIMNHLKWMGHSSTIMDLQRSLRNDVHTCEVVLAAKDGFSVRAHSFVLSTCSDLMRNLLVDVPPGHEATIVLPDIRGELLESMLSFIYMGETGLPSVLLSEFLEAINLLGIKSAISFECNPSSNVDVGAGALAVEAAKSISGLQIAQAELIDEEEEGQAQMAVAAAVMAEEQPAAHTSRPLDFLDVYNETPKITYSIEHMGGHSSGNQFILTENTGAFTITQSATSLSKLETSETAASVGDVDMMEDDAEADTTEEEPENQILEEEYPSDPLIEMTGGGDLEDDDMHEDLVDEDMLDIKPRKLAVAKPRGRRPNRTKIMKRAPPRQQPQFLTLKHEGKDDINDALDLAADAVIIEGLSLQKAADRYDISKTVLWRRVRTNPAYMRSTRERPSLSEAYERLKTGDSLKNISQDLGIPMSTLHRHKVRLSAQGRLPDFVACRRRDTTPKDELREKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRKMSGADRKVKKEEQDDYEEEILN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611273;
- 90% Identity
- iTF_00514999;
- 80% Identity
- iTF_00514999;