Dsub013683.1
Basic Information
- Insect
- Drosophila subsilvestris
- Gene Symbol
- retn
- Assembly
- GCA_035043285.1
- Location
- JAWNNB010001922.1:4704030-4718323[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-26 9.9e-23 80.5 0.0 2 89 341 426 340 426 0.96
Sequence Information
- Coding Sequence
- ATGCGTGGCGCACTTCTTGGCAAAGAGTCACGGCTGAAAATCTTTGCAGTACGCTCTGACCACGACTCTACCGGGCAGGAGTGGACGCGGCTGTGTACCCCTTTTCTAGCGGGAGGCCAGGCCCTGGAGCCGCGTTTATCCGAGAGTTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGAGAGCATCATCAGTTGAGCGCCAAGGCGGCAATTGCGGCCAGACTCAGTCACACAGCGGCCGGAGGCGGAGGCCACAACTTTGCCAGTCCCGATCAGCAGACAGAACTGTCGCTAAGCCATCATCACCAGCTGCCGCCAAATCATCCGCTGAATGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACACAGCATTCCAAATCTGCAGCACAGCGACGTACTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTAATGGAACAGGACTATGCGGCCGCTGCACATGCGGCAGCCTTCGGGGCCAACATGCTGCCCACGACGATTAGCTCGGGCTTTACACTGCCCCACAATTCGGTggctgcggcagcggcagcagcctcCTTTGGCCATGTCGCAACGGCGCCCACTGCCAGCAATGGAGGAAGCTATAATGGGGGTGTcatgggaggaggaggaggaggcggtggcACCACCACTACACCAAATTCGGGCAGCAATCCAGCCACCAATGGAGGCAGCCACACCGtttccaacaacagcagccacaacaacaacaacagtagcagcggaggcggaggaggaccaggaccaggaggaggcggcggaggaggaggacatcCCTTCTCGTTTGCATCGCCCACAGCTGTGGCAGGCGGCGGCAAAGAAGCCCGCCACTTTGCAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGACGATCCCAAGCGAAAGGAGTTCCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGgcACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCCGTGCTGGATCTGTACGAGCTGTACAATCTGGTGATTGCGCGCGGTGGCCTCGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCAGCGTTCACCCTGCGGACACAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCCATGACGCCCATTTCGCGCCCCTCGCTGCCGGGTGGCATGCAGCAGATGTCGCCGCTGGCCCTGGTCACCCATGCAGCGGTGGCCAACAATCAGCAGGCCcaggcagcagccgctgccgcgGCCGCACATCATCGACTGATGGGTGCGCCAGGATTCGGCCAAATGCCCAATCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTACAGTTGATCCAGGCCAAGAAGGAGCAGGTCATGCCGCCCGTCCTGGGCGCCACACAtccccaccagcagcatcaacaccagcaccagcaccagcagcagcagccgccgtcacagcagcagcagcacctcctccagcagcagcagcagcggcagcgatcACAGAGTCCGGACATCAGCAAACACGATGCGCTCAGCGCTCAGGTGGCACTGTGGCACATgtaccacaacaacaacagtccaccgggctcggcacacacctCCCCAGCAACGACATCAACCCCATATAACACTTTTGCTCTCCATTACAGCGAAGCCCTGAACCTATCCGACTCTCCACCCAATCTCACAAACATCAAAAGAGAACGCGAGCGGGAGCCGACGCCAGAGCCCGTGGAGCAGGACGACGGACCGCACCACCCACCGCCGGCCAAGCGAGGGGGCAGCAGCCTCCTGCCGCCCGGCTTCCCCGCCAATTTCTATCTGAATCCACACAACATGGCCGccgtggcggcggcagcgggcTTCCATCACCAGGCGAACAGCGGCCATggacaccagcaccagcaggacGCCGCCTCCGAGGGGGAGCCCGAGGACGAGTACGGCCATGCTGAGCACAACACCACGGGCAACTCCTCGTCCATGCACGACGACGGCGAGGCCCAGCAGATGAATGgacaccaccatcaccatcatcagaGTCATCAGCTGGACAAGTCGGATGACTCGGCCATCGAGAACTCGCCCAGCACATCCACCACGACGGCCTCCGTGGGTCATCGTCACAGTTCGCCTGTTTCCACCAAGAAGAAGAGCGGTGGCAAGGCGGCACAGGCCAGCGGCAAGGATCAGCCCGAGGAGAAGTGTGGCGGTAGCTCCGGCAAAATGAATCCCCTGGATACGCTGAGCCTACTCTCGGGCTTGCAGTTCCAGGTGTCCAGGAATGGAACTGGCGAGAACGGAGAGCAGCAGCTCATTGTCAATCTCGAGCTGAATGGCATCAAGTACTCGGGCATCCTGATGGCGAATGCTCCAATCGGAGACCAGGCGGAGACCAGAACGGGATCGCCATGCCCCGAGCCATCGGGTGACGACGAccaggaggaggacgaggaggaagaggaggctTCGCATGccgtggaggaggaggctcAACGTTCGCCAGTCAAAGAAGAAGCCAGCGAGGAGACAGACCAGGATATGGACaccagtgctgctgctgccattgtgaatggtggtggggggactgtgggagtgggagtgggtgctGCCGGTGTGGGTATCTCCCTGCTGAAGGATGCGGTGCTCAGTTCGTAG
- Protein Sequence
- MRGALLGKESRLKIFAVRSDHDSTGQEWTRLCTPFLAGGQALEPRLSESSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTAAGGGGHNFASPDQQTELSLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFTLPHNSVAAAAAAASFGHVATAPTASNGGSYNGGVMGGGGGGGGTTTTPNSGSNPATNGGSHTVSNNSSHNNNNSSSGGGGGPGPGGGGGGGGHPFSFASPTAVAGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKEQVMPPVLGATHPHQQHQHQHQHQQQQPPSQQQQHLLQQQQQRQRSQSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPATTSTPYNTFALHYSEALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHGHQHQQDAASEGEPEDEYGHAEHNTTGNSSSMHDDGEAQQMNGHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGGKAAQASGKDQPEEKCGGSSGKMNPLDTLSLLSGLQFQVSRNGTGENGEQQLIVNLELNGIKYSGILMANAPIGDQAETRTGSPCPEPSGDDDQEEDEEEEEASHAVEEEAQRSPVKEEASEETDQDMDTSAAAAIVNGGGGTVGVGVGAAGVGISLLKDAVLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611181; iTF_00487091; iTF_00474293; iTF_00563679; iTF_00471393; iTF_00580483; iTF_00574593; iTF_00580482; iTF_00517495; iTF_00484230; iTF_00600838; iTF_00578309; iTF_00514673; iTF_00480664; iTF_00473564; iTF_00535839;
- 90% Identity
- iTF_00563679;
- 80% Identity
- -