Dgua007472.1
Basic Information
- Insect
- Drosophila guanche
- Gene Symbol
- retn
- Assembly
- GCA_900245975.1
- Location
- NW:2076374-2097623[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-26 6.4e-23 80.5 0.0 2 89 322 407 321 407 0.96 2 2 2.1 4.6e+03 -2.4 0.3 14 37 576 604 542 618 0.58
Sequence Information
- Coding Sequence
- ATGCAACTTCGCGTGCACCCTACCATGGACTGTAGCGGCCGTTCAAATAGCAATATTGAACGCGATTCCGATTTGGGCGACGATCTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCCAGACTCAGTCACACAGCGGCCGGAGGAGGCGGCGGCCACAACTTTGCCAGTCCCGAGCAGCAGACAGAATTGTCGCTGAGCCATCATCACCAGTTGCCGCCAAATCATCCGCTCAATGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACACAGCATTCCAAGTCTGCAGCACAGCGACGTGCTGGAGAAGCTAAAGATGCAGGTGCGCGACATGAAGGTGGGACTAATGGAACAGGACTATGCAGCCGCGGCACATGCCGCTGCCTTCGGGGCCAATATGCTGCCCACGACAATTAGCGCGGGCTTCACACTGCCACACAATTCGGTGGCTGCAGCCGCGGCGGCTGCCTCCTTTGGCCATGTGGCAGCGGCGCCCACCGCCAGCAATGGTGGCAGCTACAATGGTGGGGGTGTCGCGACACCAGCTACGGGcagcaatgcagcagcagccaccaatgGAGGCAGTCACtccagccacaacagcagcagcagcggtggtggaggaggaggaggaggaggcgcagGACCTGGaggaggcaacggcaacggcaacgctGGTGGACATCCCTTTTCGTTTGCATCGCCCACAGCTGTggcaggcggcggcggaggcggcggaggcggaggcggcaaAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCGTCGCAGCAAAATAATGGATGGAGCTTCGAGGAGCAATACAAACAAGTCAGACAGCTCTATGAAATCAATGACGATCCCAAGCGCAAGGAGTTCCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCCGTGCTGGATTTGTATGAGCTGTACAATCTGGTGATTGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCGGCGTTCACACTGCGGACACAATACATGAAGTATCTGTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCGCGGCCTTCGCTGCCGGGTGGCATGCAGCAGATGTCGCCACTGGCTCTGGTCACACATGCGGCGGTGGCCAACAATCAGCAGGCGCAGgcggcagccgccgcagcggcCGCACATCATCGACTGATGGGTGCGCCGGGTTTCGGCCAGATGCCCAATCTCGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCATGACGCCAGTCCTGGGCGCCACACATCCccaccatcagcatcagcaccagcagcagcagcagcagcagcagcagcagcagcagacgccgtcacagcagcatcagcaccagcagcagcagcagcagcatctccttcagcagcaacagcagcagcagcggcagcgatcACAGAGTCCGGACATAAGCAAGCACGATGCGCTTAGCGCACAGGTGGCACTGTGGCACATgtaccacaacaacaacagtccaCCAGGATCGGCACACACCTCACCACAGCAACGCGAAGCCCTGAACCTCTCCGACTCACCACCGAATCTCACAAACATCAAAAGAGAACGCGAACGGGAGCCAACGCCAGAGCCCGTGGAGCAGGACGATGGACCGCATCACCCACCGCCGGCCAAGCGAGGGGGCAGCAGCCTCCTGCCGCCCGGCTTTCCCGCCAATTTCTATCTAAATCCACACAACATGGCCGccgtggcggcagcagcgggcTTCCATCATCAGGCGAACAGCGGCCATGGACACGGGCACCAGCAGGACGCCACCTCCGAGGGTGAGCCCGAGGACGAGTACGGCCATGCAGAGCACAACACCACGGGCAATTCCTCGTCCATGCACGACGATGGTGAGGTTCAGCAGATGAACGgacaccaccatcatcatcatcatcatcagagccATCAGCTGGACAAGTCGGATGATTCGGCCATTGAGAACTCGCCCAGCACATCCACCACCACAGCCTCCGTGGGCCATCGCCACAGTTCGCCCGTGTCCACGAAGAAGAAGAGCGGCGGCAAGGCGTCCAACCAGGCCAGCGGCAAGGATCAGCCTGGGGAGGAGAAGTGTGGCGGCAGCTCCAAAATGAATCCCCTGGACACGCTCAGTCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGGAATGGCACTAGCGAGAACGGAGAACAGCAGCTCGTTGTTAATCTGGAGCTGAATGGCATCAAGTACTCGGGTGTCCTAGTGGCGAACGCTCCCATCCCCAGCCAGGCGGAGACCAGAACGGGATCGCCATGCGCCGAGCCAGCGGCCGATgaggacgacgaggaggaggaggaggagcaggaagagCAAGCGTCGCATGCCGTCGACGACGAGCCTCAACGTTCGCCAGTCAAAGAAGAAGCCAACGAGGAGACAGACCAGGATATGGACAccagtgctgctgccattgtgaATGGTGGGGGGACTGTGGGAGTGGGTGGCGGTGTGGGTATGTCCCTGCTGAAGGATGCGGTGCTCAGTTCGTAG
- Protein Sequence
- MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTAAGGGGGHNFASPEQQTELSLSHHHQLPPNHPLNALGSFMGIGGLHSIPSLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISAGFTLPHNSVAAAAAAASFGHVAAAPTASNGGSYNGGGVATPATGSNAAAATNGGSHSSHNSSSSGGGGGGGGGAGPGGGNGNGNAGGHPFSFASPTAVAGGGGGGGGGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMTPVLGATHPHHQHQHQQQQQQQQQQQQTPSQQHQHQQQQQQHLLQQQQQQQRQRSQSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHGHGHQQDATSEGEPEDEYGHAEHNTTGNSSSMHDDGEVQQMNGHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGGKASNQASGKDQPGEEKCGGSSKMNPLDTLSLLSGMQFQVARNGTSENGEQQLVVNLELNGIKYSGVLVANAPIPSQAETRTGSPCAEPAADEDDEEEEEEQEEQASHAVDDEPQRSPVKEEANEETDQDMDTSAAAIVNGGGTVGVGGGVGMSLLKDAVLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603134;
- 90% Identity
- iTF_00600838;
- 80% Identity
- -