Dbif007389.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- retn
- Assembly
- GCA_009664405.1
- Location
- CM019043.1:6931565-6953995[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-26 6.9e-23 80.6 0.0 2 89 297 382 296 382 0.96 2 2 4.3 9.1e+03 -3.1 0.0 21 38 542 564 526 575 0.55
Sequence Information
- Coding Sequence
- ATGCAACTTCGCGTGCACCCTACTATGGACTGTAGCGGCCGTTCAAATAGCAATATTGAACGCGATTCCGATTTGGGAGACGATCTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCCAGACTCAGTCACACAGCGGCCGGAGGCGGAGGCCACAACTTTGCCAGTCCCGATCAGCAGACAGAACTGTCCCTCAGCCATCATCACCAGCTGCCGCCAAATCATCCGCTTAACGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACACAGCATTCCAAATCTGCAGCACAGCGACGTCCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTAATGGAACAGGACTATGCGGCCGCTGCGCATGCGGCAGCCTTCGGGGCCAACATGCTGCCCACGACGATTAGCTCGGGCTTTACACTGCCCCACAATTcggtggctgcggctgcggcagcAGCCTCCTTTGGCCATGTCGCAACTGTGCCCACTGCCAGCAATGGAGGAAGCTATAATGGGGCGACCAATGGAGGCAGCCACTCTGTttccaacaacagcaacaacagccacaacaacagtagcagcggtggaccaggaccaggaggaggcggaggtggaggtggaggacaTCCCTTCTCGTTTGCATCGCCCACAGCAGTGGCAGGCGGCGGCAAAGAAGCCCGCCACTTTGCAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGACGATCCCAAGCGCAAGGAGTTCCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCTGTGCTGGATCTGTACGAGCTGTACAATCTGGTGATTGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCAGCGTTCACCCTGCGGACCCAATACATGAAGTATCTGTACCCATACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCCCTGACGCCCATTTCGCGCCCCTCGATGCCGGGTGGCATGCAGCAGATGTCGCCGCTGGCCCTGGTCACCCATGCGGCGGTGGCCAACAATCAGCAGGCCcaggcagcagccgccgccgcggCCGCACATCATCGACTGATGGGTGCTCCAGGATTCGGCCAGATGCCCAATCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCATGCCGCCAGTCCTGGGCGCCACACAtccccaccagcagcaccagcaccaacagcagcagccgccgtcacagcagcagcagcagcacctcctgcagcagcagcagcaacggcagcgaTCACAGAGTCCGGATATTAGCAAGCACGATGCGCTCAGCGCTCAGGTGGCACTGTGGCACATgtaccacaacaacaacagtccaCCGGGATCGGCGCACACCTCCCCCCAGCAACGCGAAGCCCTGAACCTCTCCGACTCCCCACCGAATCTCACAAACATCAAAAGAGAACGCGAACGGGAGCCGACGCCAGAGCCCGTGGAGCAGGACGACGGACCACATCACCCACCGCCGGCCAAACGGGGGGGCAGCAGCCTCCTGCCGCCCGGCTTCCCCGCCAATTTCTATCTGAATCCACACAACATGGCCGCcgtggcggcggcagcgggcTTCCATCACCAGGCGAACAGCGGCCATggacagcagcaccagcaggacGCCGCCTCCGAGGGGGAGCCCGAGGACGAGTACGGCCATGCAGAGCACAACACCACTGGCAACTCCTCGTCCATGCACGACGACGGCGAGGCCCAGCAGATGAACGGacaccaccatcaccatcaccagaGCCATCAGCTGGACAAATCGGATGACTCGGCCATCGAGAACTCGCCCAGCACATCCACCACCACGGCCTCCGTGGGGCATCGCCACAGTTCGCCGGTGTCCACCAAGAAGAAGAGCGGTGGAAAGGCGGCCCAGGCCAGCGGCAAGGATCTGCCGGAGGAGAAGTGTGGATCTAGCTCCAAAATGAATACCCTGGACACGCTGAGCCTTCTCTCGGGCATGCAGTTCCAAGTGGCCAGGAATGGAACTGGCGAGAACGGAGAGCAGCAGTTGGTTGTCAATTTCGAGCTGAATGGCATCAAGTACTCGGGTGTTCTGGTGGCGAATGCTCCCATCGGACACCAGGCGGAGACCAGAACGGGTTCGCCATGCCCCGAGCCAGCAGGTgatgacgaggaggaggagggcgaAGAGGAGGCTTCGCATGCCGTGGTGGAGGAGGCTCAACGTTCGCCAGTCAAAGAAGAAGCCATCGAGGAGACAGACCAGAATATGGACTCcagtgctgctgccattgTGAATGGTGGTGGGGGGACTGTGGGGGTGGGTGCTGCCGGTGTGGGTATCTCCCTGCTGAAGGATGCGGTGCTCAGTTCGTAG
- Protein Sequence
- MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTAAGGGGHNFASPDQQTELSLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFTLPHNSVAAAAAAASFGHVATVPTASNGGSYNGATNGGSHSVSNNSNNSHNNSSSGGPGPGGGGGGGGGHPFSFASPTAVAGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSMPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGATHPHQQHQHQQQQPPSQQQQQHLLQQQQQRQRSQSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHGQQHQQDAASEGEPEDEYGHAEHNTTGNSSSMHDDGEAQQMNGHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGGKAAQASGKDLPEEKCGSSSKMNTLDTLSLLSGMQFQVARNGTGENGEQQLVVNFELNGIKYSGVLVANAPIGHQAETRTGSPCPEPAGDDEEEEGEEEASHAVVEEAQRSPVKEEAIEETDQNMDSSAAAIVNGGGGTVGVGAAGVGISLLKDAVLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603134;
- 90% Identity
- iTF_00563679;
- 80% Identity
- -