Basic Information

Insect: Drosophila persimilis
Gene Symbol: retn
Assembly: GCA_003286085.2
Location: NW:14902400-14925908[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.9e-26 6.8e-23 80.5 0.0 2 89 315 400 314 400 0.96

2 2 2.9 6.8e+03 -2.8 0.1 15 38 558 586 546 598 0.55

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.9e-26	6.8e-23	80.5	0.0	2	89	315	400	314	400	0.96
2	2	2.9	6.8e+03	-2.8	0.1	15	38	558	586	546	598	0.55

Sequence Information

Coding Sequence: ATGCAACTTCGCGTGCACCCTACTATGGACTGTAGCGGTCGTTCAAATAGCAATATTGAACGTGATTCCGATTTGGGAGACGATCTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGTGACTCCGTGGAGGGAGAGCATCATCAGCTGAGTGCCAAGGCGGCGATTGCTGCCAGACTCAGTCACACAGCGGccggcggaggcggaggccaCAACTTTGCCAGTCCCGATCAGCAGACAGAACTGCCACTAAGCCATCACCATCAGCTGCCGCCAAATCATCCGCTCAATGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACATAGCATTCCAAATCTGCAGCACAGCGACGTCCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTAATGGAACAGGACTATGCGGCCGCCGCCCATGCGGCAGCCTTCGGGGCCAATATGCTGCCCACGACGATTAGCCCGGGCTTCACCCTGCCCCACAATtcggtggcagcggcagcggcggcagcctCCTTTGGGCATGTGGCCTCGGCGCCCACCGCCAGCAATGGCGGCAGCTACAACGGGGGTGTCATGGGAGGaggcaccaccaccacaccaAGTTCGGGCAACAATCCAGCCACCAATGGAGGCAGCCACTCCGtttccaacaacaacaacagtagcagcggaggaggaggaggaggtggaggagcaGGACCAGGAGGAGGCACAGGCGGAGGACATCCCTTCTcgtttgcatcgcccacaGCAGTGGCAGGCGGTGGCGGCAAAGAAGCCCGCCACTTTGCAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGACGATCCCAAGCGCAAGGAGTTCCTCGATGATCTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCCGTGCTGGATCTCTACGAGCTGTACAATCTGGTAATTGCGCGCGGTGGCCTCGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCGAGCATCACCAGTGCAGCGTTCACCCTGCGGACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTAAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCCCTGACGCCCATTTCGCGCCCCTCTCTGCCGGGTGGCATGCAGCAGATGTCGCCGCTGGCTTTGGTCACCCATGCGGCAGTGGCTAACAATCAGCAGGCCCAGGCAGCGGCCGCCGCCGCGGCCGCACATCATCGACTGATGGGTGCCCCGGGATTCGGCCAGATGCCCAATCTCGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTCATCCAGGCCAAGAAGGATCAGGGCATGGCGCCAGTCCTGGGCGCCACACATccccaccagcagcaccaacaccaacaccagcagcagcagccaccgccacagcagcagcaacatctcctccagcaacaacagcagcagcagcagcggcagcgatcACAGAGTCCGGACATCAGCAAGCACGATGCGCTCAGCGCACAGGTGGCACTCTGGCACATgtaccacaacaacaacagtccACCAGGATCGGCACACACCTCCCCGCAGCAACGCGAAGCCCTAAACCTCTCAGACTCTCCACCGAATCTCACAAATATCAAAAGAGAACGCGAACGAGAGCCTACGCCAGAGCCCGTGGAGCAGGACGACGGACCGCACCACCCACCGCCTGCTAAACGAGGGGGCAGCAGCCTCCTGCCGCCCGGTTTCCCCGCCAATTTCTATCTGAATCCACACAACATGGCTGCcgtggcggcggcagcaggcTTCCATCATCAGGCGAACAGCGGCCATGGAGgacaccagcaccagcaggaCGCCGCCTCCGAGGGGGAACCCGAGGACGAGTACGGCCATGCAGAGCACAACACCACGGGCAACTCCTCGTCCATGCACGACGACGGCGAGGCCCAACAGATGAACggacaccaccatcaccaccaCCAGAGCCATCAGCTGGACAAGTCGGATGACTCGGCCATCGAAAACTCGCCCAGCACATCCACCACCACCGCCTCGGTGGGGCATCGCCACGGTTCGCCGGTGTCCACCAAGAAGAAGAGCGGCAAGGCGGCCCAGGCCAGTGCCAAGGATCAGCCGGAGGAGAAGTGTGGCGGTAGCTCTAAAATGAATCCACTGGATACGCTGAGCCTACTCTCGGGCATGCAGTTCCAGGTGGCCAGGAATGGAACTGGCGAGAATGGAGAGCAGCAGCTTATTGTCAATCTCGAGCTAAATGGCATCAAGTACTCGGGTGTCCTGGTGGCGAATGCACCAATAACACAGGCATCGACCGGGAGAACGGGATTGCCATGCCCCGAGCCAGCGGGCGATGACGAGGAGGATGAGGAAGAGGAGGATTCGCATGCCGTGGACGAGGAGGAGGCTCAACAACGTTCGCCAGTCAAGGAAGAGGCCAACGAGGAGACAGACCAGGATATGGACACcagttctgctgctgctgccattgtgaATGGTAGCGGGGGGACAGTGGGAGCGGGAGTGGGTGCTGCCGGTGTGGGTATCTCCCTGCTGAAAGATGCGGTGCTCAGTTCGTAG
Protein Sequence: MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVEGEHHQLSAKAAIAARLSHTAAGGGGGHNFASPDQQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISPGFTLPHNSVAAAAAAASFGHVASAPTASNGGSYNGGVMGGGTTTTPSSGNNPATNGGSHSVSNNNNSSSGGGGGGGGAGPGGGTGGGHPFSFASPTAVAGGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKDQGMAPVLGATHPHQQHQHQHQQQQPPPQQQQHLLQQQQQQQQRQRSQSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHGGHQHQQDAASEGEPEDEYGHAEHNTTGNSSSMHDDGEAQQMNGHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHGSPVSTKKKSGKAAQASAKDQPEEKCGGSSKMNPLDTLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANAPITQASTGRTGLPCPEPAGDDEEDEEEEDSHAVDEEEAQQRSPVKEEANEETDQDMDTSSAAAAIVNGSGGTVGAGVGAAGVGISLLKDAVLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00603134;
90% Identity: iTF_00563679;
80% Identity: -