Basic Information

Insect: Drosophila subobscura
Gene Symbol: retn
Assembly: GCA_008121235.1
Location: NC:18183798-18206277[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-26 6.9e-23 80.4 0.0 2 89 317 402 316 402 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-26	6.9e-23	80.4	0.0	2	89	317	402	316	402	0.96

Sequence Information

Coding Sequence: ATGCAACTTCGCGTGCACCCTACTATGGACTGCAGCGGCCGTTCAAATAGCAATATTGAACGCGATTCCGATTTGGGCGACGATCTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCCAGACTCAGTCACACAGCGGCcggcggaggaggcggcggccaCAACTTTGCCAGTCCCGAACAGCAGACAGAATTGTCGCTCAGCCATCATCACCAGTTGCCGCCAAACCATCCGCTCAATGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACACAGCATTCCAAGTCTGCAGCACAGCGACGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTAATGGAACAGGACTATGCGGCCGCTGCCCATGCCGCTGCCTTCGGGGCCAATATGCTGCCCACAACCATAAGCTCGGGCTTTACGCTGCCACACAATTcggtggctgcagcagcggccgctgcGTCCTTTGGCCATGTGGCAGCGGCGCCCACCGCCAGCAATGGTGGCAGCTACAATGGTGGGGGTGTCGCGACACCAACTTCAGGCAGcaatgcagcagccaccaatGGAGGCAGtcacaacagccacaacagcagcagcggcggaggaggaggcgcaggACCTGGcggaggcaacggcaacggcaacggcaacgcgGGTGGACATCCCTTTTCGTTTGCCTCACCCACAGCTGtggctggcggcggcggcggcggcggcggcggcaaagaAGCCCGCCACTTTGCAGCCAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCGTCGCAGCAAAATAATGGATGGAGCTTCGAGGAGCAATACAAACAAGTCAGACAGCTCTACGAAATCAATGACGATCCCAAGCGCAAGGAGTTCCTCGATGATCTGTTCTCGTTTATGCAAAAGCGCGgcACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCCGTGCTGGACTTGTATGAGCTGTACAATCTGGTGATTGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCCTCGAGCATCACCAGTGCGGCGTTCACACTGCGGACACAATACATGAAGTATCTGTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCACTGACGCCCATCTCGCGGCCTTCGCTGCCGGGTGGCATGCAGCAGATGTCGCCGCTGGCTCTGGTCACACATGCGGCGGTGGCCAACAATCAGCAGgcgcaggcggcagcagccgcagcggccgcACATCATCGGCTGATGGGTGCGCCGGGCTTCGGCCAGATGCCCAATCTCGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCATGCCGCCAGTTCTGGGCGCCACAcatccccaccagcagcatcagcaccagcagcagcagcagacgccgtcacagcagcaacagcagcagcagcagcagcatctcctccagcagcagcagcagcagcggcagcgatcACTGAGTCCGGACATAAGCAAGCACGATGCGCTCAGCGCACaggtggcactgtggcacatgtaccacaacaacaacagtccACCAGGATCGGCACACACCTCACCACAGCAACGCGAAGCCCTGAACCTCTCCGACTCACCACCGAATCTCACAAACATCAAAAGAGAACGCGAACGGGAGCCCACGCCAGAGCCCGTGGAGCAGGACGATGGACCGCATCACCCACCGCCGGCCAAGCGAGGGGGCAGCAGCCTCCTGCCGCCCGGCTTTCCCGCCAACTTCTATCTGAATCCACACAACATGGCCGccgtggcggcagcagcgggcTTCCATCATCAGGCGAACAGCGGCCATGGACACGGGCACCAGCAGGACGCCGCCTCCGAGGGTGAGCCCGAGGACGAGTACGGCCATGCAGAGCACAACACCACGGGCAATTCCTCGTCCATGCACGACGATGGTGAGGCTCAGCAGATGAACggacaccaccatcaccaccatcaGAGCCATCAGCTGGACAAGTCGGATGACTCGGCCATCGAGAACTCGCCCAGCACATCCACCACCACAGCCTCCGTGGGCCATCGCCACAGTTCGCCCGTGTCCACGAAGAAGAAGAGCGGCGGCAAGGCGGCCAACCAGGCGAGCGGCAAGGATCAGCCGGGGGAGCAGAAGTGTGGCGGCAGCTCCAAAATGAATCCACTGGACACGCTCAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGGAATGGCACTGGCGAGaatggagagcagcagctcgttgTCAATCTCGAGCTGAATGGCATCAAGTACTCGGGTGTCCTGGTGGCGAATGCTGCCATCCCCAGCCAGGCGGAGACCAGACCGGGATCGCCATGCGCCGAGCCAGCGGCTGATgaggacgacgaggaggaggaggagcaggaagagcaaACGTCGCATGCCGTGGAGGAGAACGCTCAACGTTCGCCAGTCAAGGAAGAAGCCAACGAGGAGACAGACCAGGATATGGACAccagtgctgctgccattgtgaATGGTGGGGGAACTGTGGGCGCGGGAGTGGGCGTGGGTGGCGGGCGGTGTGGGTATGTCCCTGCTGAAGGATGCGGTGCTCAGTTCGTAGGCCGGCCAGGGGAAAAGTATCGAGAGAGGAATACCAAAGTCATATTTttcagaaaaatacaaaaagaagtaaaactcacacacacacacacacacacagatgcatcAAACAGCAacctacatatatgtatatacacacacacacacacacacacatgcagcgaCAGAGCAGTAGAATAG
Protein Sequence: MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTAAGGGGGGHNFASPEQQTELSLSHHHQLPPNHPLNALGSFMGIGGLHSIPSLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFTLPHNSVAAAAAAASFGHVAAAPTASNGGSYNGGGVATPTSGSNAAATNGGSHNSHNSSSGGGGGAGPGGGNGNGNGNAGGHPFSFASPTAVAGGGGGGGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGATHPHQQHQHQQQQQTPSQQQQQQQQQHLLQQQQQQRQRSLSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHGHGHQQDAASEGEPEDEYGHAEHNTTGNSSSMHDDGEAQQMNGHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGGKAANQASGKDQPGEQKCGGSSKMNPLDTLSLLSGMQFQVARNGTGENGEQQLVVNLELNGIKYSGVLVANAAIPSQAETRPGSPCAEPAADEDDEEEEEQEEQTSHAVEENAQRSPVKEEANEETDQDMDTSAAAIVNGGGTVGAGVGVGGGRCGYVPAEGCGAQFVGRPGEKYRERNTKVIFFRKIQKEVKLTHTHTHTDASNSNLHICIYTHTHTHTCSDRAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00603134;
90% Identity: iTF_00514673;
80% Identity: -