Dhel020572.1
Basic Information
- Insect
- Drosophila helvetica
- Gene Symbol
- retn
- Assembly
- GCA_963969585.1
- Location
- OZ018404.1:15279409-15302149[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-26 1.2e-22 80.5 0.0 2 89 327 412 326 412 0.96 2 2 6.5 1.6e+04 -3.2 0.0 21 38 575 597 559 608 0.55
Sequence Information
- Coding Sequence
- ATGCAACTTCGCGTGCACCCTACTATGGACTGTAGCGGCCGTTCAAATAGCAATATTGAACGCGATTCCGATTTGGGAGACGATCTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGTGACTCCGTGGATGGAGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCGGCCAGACTCAGTCACACAGCGTccggcggaggcggaggccaCAACTTTGCCAGTCCCGATCAGCAGACAGAACTGTCACTAAGccatcaccatcaccagcTGCCGCCCAATCATCCGCTCAACGCGCTGGGCAGCTTCATGGGCATCGGGGGACTACACAGCATTCCAAGTCTGCAGCACAGCGACGTCCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTAATGGAACAGGACTATGCGGCCGCTGCCCATGCGGCAGCCTTCGGGGCCAACATGCTGCCCACGACGATTAGCTCGGGCTTTACCCTGCCCCACAATTcggtggcagcggcggcggcagccgCCTCCTTCGGCCATGTGGCCTCGGCGCCCACTGCCAGCAATGGCGGCAGCTACAATGGGGGTGTCAtgggaggagggggaggaggaggcaccaccaccaccacaccaAATTCGGGCAACAATCCAGCCACCAATGGAGGCAGCCACTCCAGCGtttccagcaacagcaacaacaacaacagtagcagcggaggaggagcaggaggtggtggaggtggagcaggaccaggcggaggcggaggcggaggacaTCCCTTCTCGTTTGCATCGCCCACAGCGGTGGCAGGCGGTGGCGGCAAAGAAGCCCGCCACTTTGCAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACgaaatcaatgacgatcccaagcGCAAGGAGTTCCTCGATGATCTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATTATGGCCAAGTCCGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATTGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCAGCGTTCACCCTGCGGACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCCCTGACGCCCATTTCGCGCCCCTCGCTCCCGGGCGGCATGCAGCAGATGTCGCCGCTGGCACTGGTCACCCATGCGGCGGTGGCCAACAATCAGCAGGCCCaggcagcagccgccgccgcggCCGCACACCATCGACTGATGGGTGCTCCAGGATTCGGCCAGATGCCCAATCTCGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCATGGCCCCAGTCCTGGGCGCCACACAtccccaccagcagcaccaacaccaacaccagcagcagccgccgccgccacagcaacagcagcagcagcatctcctccagcagcagcagcagcggcagcgatcGCAGAGTCCGGACATCAGCAAGCACGATGCGCTCAGCGCACAGGTGGCACTGTGGCACATgtaccacaacaacaacagtccACCAGGCTCGGCGCACACCTCCCCCCAGCAACGCGAAGCCCTGAACCTCTCCGACTCTCCGCCGAATCTCACGAACATCAAAAGGGAACGCGAACGGGAGCCGACGCCAGAGCCCGTGGAGCAGGACGACGGACCGCTCCACCCACCGCCGGCCAAACGAGGGGGCAGCAGCCTTCTGCCGCCCGGCTTCCCCGCCAATTTCTATCTGAATCCACACAACATGGCCGCcgtggcggcggcagcgggCTTCCATCACCAGGCGAACAGCGGCCATGCAGgacaccagcaccaccagcaggaCGCCGCCTCCGAGGGGGAGCCCGAGGACGATTACGGCCATGCAGAGCACAACACCACGGGCAACTCGTCGTCCATGCACGACGAGGGCGATGGCGAGGCCCAGCAGATGAACGGacaccaccatcaccaccaccaGAGCCATCAGCTGGACAAGTCGGATGACTCGGCCATCGAGAACTCGCCCAGCACGTCCACCACCACCGCCTCGGTGGGACATCGCCACAGTTCGCCGGTGTCCACCAAGAAGAAGAGCGGCAAGGCGGCCCAGGCCAGCTCCAAGGACCTGCCGGAGGAGAAGTGTGGCGGTAGCTCTAAACTGAATCCCCTGGACACGCTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGGAATGGAACCGGCGCGAACGGAGAGCAGCAGCTCATTGTCAATCTCGAGCTGAATGGCATCAAGTACTCGGGTGTCTTGGTGGCGAATGCCCCAATTACACAGACGGAGACCGGAAGAACGGGATCGCCATGCCCCGAGCCAGCGGGTGatgacgaggaggaggacgaagAGGAGGAGGCTTCGCATGCCGTGGACGAGGAGGCTCAACAACAACAGCGTTCGCCAATCAAAGAAGAAGCCAACGAGGAGACCGACCAGGACATGGACaccagtgctgctgctgccattgtgAATGGTGGCGGGGGAACAGTGGgagcgggagtgggagtgggagtgggtgcTGCCGGTGTGGGTATCTCCCTGCTGAAGGATGCGGTGCTCAGTTCGTAG
- Protein Sequence
- MQLRVHPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTASGGGGGHNFASPDQQTELSLSHHHHQLPPNHPLNALGSFMGIGGLHSIPSLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFTLPHNSVAAAAAAASFGHVASAPTASNGGSYNGGVMGGGGGGGTTTTTPNSGNNPATNGGSHSSVSSNSNNNNSSSGGGAGGGGGGAGPGGGGGGGHPFSFASPTAVAGGGGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPGFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMAPVLGATHPHQQHQHQHQQQPPPPQQQQQQHLLQQQQQRQRSQSPDISKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPLHPPPAKRGGSSLLPPGFPANFYLNPHNMAAVAAAAGFHHQANSGHAGHQHHQQDAASEGEPEDDYGHAEHNTTGNSSSMHDEGDGEAQQMNGHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGKAAQASSKDLPEEKCGGSSKLNPLDTLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAPITQTETGRTGSPCPEPAGDDEEEDEEEEASHAVDEEAQQQQRSPIKEEANEETDQDMDTSAAAAIVNGGGGTVGAGVGVGVGAAGVGISLLKDAVLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603134;
- 90% Identity
- iTF_00563679;
- 80% Identity
- -