Basic Information

Insect: Drosophila obscura
Gene Symbol: stc
Assembly: GCA_018151105.1
Location: NW:3508036-3512807[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.4e+04 -4.2 1.6 15 19 474 478 473 478 0.81

2 13 0.051 3.7e+02 1.0 2.2 4 11 507 514 506 515 0.91

3 13 6.4e-07 0.0046 16.6 15.1 1 19 519 536 519 536 0.93

4 13 5e-06 0.036 13.8 15.6 1 19 572 590 572 590 0.99

5 13 2 1.4e+04 -6.4 3.9 7 13 594 600 594 601 0.74

6 13 2.1e-09 1.5e-05 24.6 13.7 1 19 630 648 630 648 0.98

7 13 0.00015 1.1 9.0 18.0 4 19 696 711 689 711 0.88

8 13 0.067 4.8e+02 0.6 11.7 1 11 751 761 751 773 0.79

9 13 5.2e-10 3.7e-06 26.5 15.5 1 18 778 795 778 796 0.97

10 13 1.8 1.3e+04 -4.0 0.9 6 10 825 829 825 830 0.81

11 13 2 1.4e+04 -8.6 11.7 4 18 837 852 832 853 0.75

12 13 1.6e-09 1.2e-05 24.9 10.1 1 17 889 905 889 912 0.95

13 13 5.6e-07 0.004 16.8 13.1 1 19 922 941 922 941 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.4e+04	-4.2	1.6	15	19	474	478	473	478	0.81
2	13	0.051	3.7e+02	1.0	2.2	4	11	507	514	506	515	0.91
3	13	6.4e-07	0.0046	16.6	15.1	1	19	519	536	519	536	0.93
4	13	5e-06	0.036	13.8	15.6	1	19	572	590	572	590	0.99
5	13	2	1.4e+04	-6.4	3.9	7	13	594	600	594	601	0.74
6	13	2.1e-09	1.5e-05	24.6	13.7	1	19	630	648	630	648	0.98
7	13	0.00015	1.1	9.0	18.0	4	19	696	711	689	711	0.88
8	13	0.067	4.8e+02	0.6	11.7	1	11	751	761	751	773	0.79
9	13	5.2e-10	3.7e-06	26.5	15.5	1	18	778	795	778	796	0.97
10	13	1.8	1.3e+04	-4.0	0.9	6	10	825	829	825	830	0.81
11	13	2	1.4e+04	-8.6	11.7	4	18	837	852	832	853	0.75
12	13	1.6e-09	1.2e-05	24.9	10.1	1	17	889	905	889	912	0.95
13	13	5.6e-07	0.004	16.8	13.1	1	19	922	941	922	941	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAGCAGACCAATGGCGCAGGCGGAGGACCGGCCAACAATGAATCCTCAACGCGTTCGTCGTCGTCGCGCGCCTGCAATGGCGATGGCCGTGATGGCACCccggcagcggcggctgcgACGGCTGCGACGGATgccaacagaaacagcaacagcaacggcaacgggggcggcggcagcaacaacaactatgTGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACACGGGCGCATTGCCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGAGGCGCCTTCGGACTAACGCCGTCCTCCTCGGAGAGCACCGCCGCCGGTGGCGATGTTTCAAATAGCTTTGGAAATTTCTATTCGCAGCCGGCGGTATTCCCTCCGCCATATCAAAATGGCGATGGTGTCGCCGCCAGTTCGGCGGCATTCGGCAACAGCTACGGGGTGGGAAACATGCAGATGCAGGGCCCCTTCTCCAATCTGTACACGCCTTTTGGCAACAATCCGTTTGACTTTAGCGCCTCCAAGCTGCAGGCATCCGCCCCAGAGTTTGTGCCTAACATGTTGAAGCTGAGCCTGGAGGAGTCCTCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATCAGCGAGGGCGCACCACAGCGTCCAGATCTACAGGGAGCCGCCGACCATCGGGGCAGCTCCacaggaggcggaggcggaggcggcggaCCAAAGCCAAGATCCAATCACAATTATGCCTTGCCCACCGAACGGGATCGTGATAGAGAGCGGGATCGTGACAGAGAGCGGGACCGTgacagagagcgagaacgTGAGCGCGACCGCGATCGGGATCGCGACCGAgatcgggatcgggatcgTGAGAGAGATTTTCGGTCTGGCGGCAACCGTCAGCAGCGTCGCGGTGACTATCGCGATGATCGCGAGGATCGATACGACCGCAACGATCGCAACGAACGCAACAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAACAAGAGACGCGACGACTGGAACAGGAATCGGGATCGCATCAACGGCTTTCCGAGAGCCGTCGATGACCTAGACACGAGCAATGAGAGCGCCCATCCCTCGCccgagaagcagcagcagcagcagcaacagataTCGCCACGCCGTGCCacgctgccaccgccgccgccgccagacAATGAGAAGCTCTCGCAGCGGGAGAAACTGATCCGAGACATCGAACAGCGGCGATTGGAGTGCCTCGTCTGTGTGGAGACCATCAAGTCACACCACTCGACGTGGTCGTGCCAGAACTGCTACCACGTCATCCATCTGAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCGGATGTGGGCTGGCGGTGTCCCGCCTGCCAGAATGTGCTGCAGGATTTGCCCCGCGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCGCGCAACGAGCTGGCCCACAGCTGCGGCGAGGTGTGCTGCCGCATCGAGGGATGTAGTCATGCGTGCACCCTGCTGTGCCATCCGGGACCCTGTCCGCCGTGCCAGGCGAATGTCGTGaggagctgcggctgcggccgAAGCTCACAGACGATGCAGTGCGCCATGAAGGAGGAGCTGAAGTGCGGCGAGATCTGCGACAAGATATTAAACTGCGGCGAGCATCACTGCAAGGAGGAGTGCCACGCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGTCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCAACTACTCGTGCAAGGACAGCTGCGGCCAGCCGCTGCCCTGTGGCAATCACAAGTGCAAGGATTCCTGTCACGCCGGAAACTGCAGACCCTGCAAACTGAGTCCCGAGCAGATAACCAGCTGTCCCTGCGGCAAGATGCCCGTGCCGGCTGAGCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGTATCTGCTCGCGAACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGGCAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTTAAGTGCCGGTGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCAGTCGAGCGGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACGCTGAGCTGTGGCAAGCACAAGTGCGACCAGCCCTGTCATCGCGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTATTGTGAGTGCGGAGCGGAGGTGATCTATCCGCCAGTGCCCTGCGGCACCAAGAAACCGCTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGACCATACACCGCAGCACAATTGTCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACAAAGTGGTGCCACGGCAACCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGACTGTCCTGCGGCAAGCCCCTGCCCTGTGGCCGTCACAAATGCATCAAGCCCTGCCACGAGGGCCCCTGTCAATCATCGGCTAGCGAGATTTGCCGCCAGAGCTGCACCAAGCCGCGCACGCTCTGCGGCCACAAGTGTGCGGCTGCCTGCCACGAGGGCGCCTGCCCGGAGACACCATGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGTAAGCTGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAGATTCTGGCACCGGCCAAGGTCAACAAGTCGAACAGAACGCTGGACTGCAACGATGAGTGTCGCGTGCTGGAAAGGAATCGCCGCCTGGCACAGGCCCTGCAGTCGCGCAATCCGGACACGCAGCAGAAATCTCTGACCAAGTATTCAGAGTTCTTGCGGGGATTCGCCAAACGGAATCAGGCGCTGACCAAGAGCGTGTACGAGACGTTGACAGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTCCCCACCATGAACCGGGAGAAGCGGCAGATGGTGCACGAGCTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACCGCACACAAGGAAAGGtgctggctgcctgccacaaGCATTATGGAGGTGTTGGCCCGTGAGTCCGGACAGCGACGCGTTCCCGTGCCCAGCAATAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MAEYWQQTNGAGGGPANNESSTRSSSSRACNGDGRDGTPAAAAATAATDANRNSNSNGNGGGGSNNNYVSFNQFIMQHNLAANTGALPYHLLANNANYTVGGGGGAFGLTPSSSESTAAGGDVSNSFGNFYSQPAVFPPPYQNGDGVAASSAAFGNSYGVGNMQMQGPFSNLYTPFGNNPFDFSASKLQASAPEFVPNMLKLSLEESSGLTNGNSTASFETAISEGAPQRPDLQGAADHRGSSTGGGGGGGGPKPRSNHNYALPTERDRDRERDRDRERDRDRERERERDRDRDRDRDRDRDRERDFRSGGNRQQRRGDYRDDREDRYDRNDRNERNKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQQQQQQISPRRATLPPPPPPDNEKLSQREKLIRDIEQRRLECLVCVETIKSHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHAGKCAACPEQVEQHCHCGKQERQVQCTRESLDKRNYSCKDSCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPAEQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLPCGRHKCIKPCHEGPCQSSASEICRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNRTLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00484801; iTF_00487689; iTF_00515275; iTF_00603755; iTF_00472045; iTF_00518125; iTF_00474194; iTF_00575251; iTF_00481236; iTF_00474901; iTF_00581210; iTF_00611740; iTF_00536445; iTF_00601439;
80% Identity: -