Basic Information

Insect: Drosophila lowei
Gene Symbol: stc
Assembly: GCA_008121275.1
Location: CM017779.1:12358010-12361521[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.6e+04 -4.1 1.6 15 19 401 405 400 405 0.81

2 13 0.048 3.9e+02 1.1 2.2 4 11 434 441 433 442 0.91

3 13 5.9e-07 0.0048 16.7 15.1 1 19 446 463 446 463 0.93

4 13 4.2e-06 0.034 14.0 16.3 1 19 499 517 499 517 0.99

5 13 2 1.6e+04 -6.3 3.9 7 13 521 527 521 528 0.74

6 13 1.9e-09 1.6e-05 24.7 13.7 1 19 557 575 557 575 0.98

7 13 0.0002 1.6 8.7 17.4 4 19 623 638 616 638 0.87

8 13 0.06 4.8e+02 0.8 11.6 1 11 678 688 678 700 0.79

9 13 4.8e-10 3.9e-06 26.6 15.5 1 18 705 722 705 723 0.97

10 13 1.7 1.4e+04 -3.9 0.9 6 10 752 756 752 757 0.81

11 13 2 1.6e+04 -8.5 11.7 4 18 764 779 759 780 0.75

12 13 7.4e-09 6e-05 22.8 10.1 1 17 816 832 816 839 0.94

13 13 5.6e-07 0.0045 16.8 13.6 1 19 849 868 849 868 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.6e+04	-4.1	1.6	15	19	401	405	400	405	0.81
2	13	0.048	3.9e+02	1.1	2.2	4	11	434	441	433	442	0.91
3	13	5.9e-07	0.0048	16.7	15.1	1	19	446	463	446	463	0.93
4	13	4.2e-06	0.034	14.0	16.3	1	19	499	517	499	517	0.99
5	13	2	1.6e+04	-6.3	3.9	7	13	521	527	521	528	0.74
6	13	1.9e-09	1.6e-05	24.7	13.7	1	19	557	575	557	575	0.98
7	13	0.0002	1.6	8.7	17.4	4	19	623	638	616	638	0.87
8	13	0.06	4.8e+02	0.8	11.6	1	11	678	688	678	700	0.79
9	13	4.8e-10	3.9e-06	26.6	15.5	1	18	705	722	705	723	0.97
10	13	1.7	1.4e+04	-3.9	0.9	6	10	752	756	752	757	0.81
11	13	2	1.6e+04	-8.5	11.7	4	18	764	779	759	780	0.75
12	13	7.4e-09	6e-05	22.8	10.1	1	17	816	832	816	839	0.94
13	13	5.6e-07	0.0045	16.8	13.6	1	19	849	868	849	868	0.96

Sequence Information

Coding Sequence: ATGGATgccaacagcaacggcaacgacggcggcagcaacaacaactatgtGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACGCAGGCAGCGCATTACCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGTGGCGCCTTTGGATTAACGCCGTCCTCCTCGGGGAGCACCGCCGCCGGTGGCGACGTTTCAAATAGCTTTGGAAATTTCTATTCGCAGCCGTCAGCCGCATTCCCGTCATATCAAAATGGCGATGGTGTCGCCGCTAGCTCGGCGGGATTCAACAACAGCTACGGGGTGGGAAACATGAACATGGGCGCGTTCTCCAATGTGTACACGCCTTTTGGCAGCAATCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCATCCGCACCAGAATTTGTGCCTAACATGATGAAGCTGACTCTGGAGGAGTCGTCTGGCCTGACGAACGGCAACAGCACTGCCAGCTTTGAAACTGCCATGAACGAGGGAGTCCAGGCAGCAACACAGCGTCCAGATCTACATGGAGCTGCCGACAATCGAGGAAGCGCCACAGGAGGCGGTCCAAAGCCAAGATCTAATCACAACTATGCCTTGCCCACCGAACGGGATCGTGACAGAGAACGGGATCGCGACAGAGAGCGGGATCGCGACCGCGATCGGGATCGAGAGAGAGACTTTCGGTCTGGCGGCACTCGTCAGCAGCGTCGCGGTGACTATCGCGATGACCGCGAAGAGCGTCGCGAGGATCGATACGACCGCAACGATCGTAACGAACGCAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAATAAGCGGCGCGACGACTGGAACCGCAATCGGGATCGCATCAACGGGTTTCCGAGAGCCGTCGACGACCTAGACACGAGCAATGAAAGCGCCCATCCCTCGCccgagaagcagcagctgcaacagatCTCGCCACGCCGTGCCCCACCGCCGCCAGAAAACGAGAAGCTCTCGCAGAGAGAGAAACTGATCCGAGACATCGAACAGAGGCGATTGGAGTGCCTCGTCTGTGTGGAGACCATCAAGGCACACCATTCGACGTGGTCGTGCCAGAACTGCTACCACGTGATCCATCTGAAGTGCACCATCACCTGGGCGAGTAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGTTGCAGGATTTGCCACGGGAGTATCTGTGCTTTTGCGGCAAGCTCAAGAATCCAACGGTGTCTCGCAACGAGTTGGCCCACAGCTGCGGAGAGGTTTGCTGCCGCATTGAAGGATGCAGCCATGCGTGCACGCTTCTCTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTCGTGAGAAGCTGCGGATGCGGCAGAAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTAAAGTGCGGCGAGATCTGCGACAAGATATTAAACTGCGGTGAGCATCACTGCAAGGAGGAGTGTCACTCGGGCAAGTGCGCCGCCTGCCCGGAGCAAGTGGAACAGCATTGCCACTGCGGCAAGCAGGATCGGCAGGTGCAGTGTACACGCGAGAGCCTCGACAAGCGCAACTATTCGTGCAAGGAGAGCTGCGGACAGCCCCTGCCCTGTGGCAATCACAAGTGCAAGGATTCCTGTCACGCCGGAAACTGCAGACCCTGCAAACTGAGCCCCGAGCAGATAACCAGCTGTCCCTGCGGCAAGATGCCCGTGCCGGCAGCTCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGTATCTGCTCACGTACGCTGCGCTGTGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGGCAGTGTCCGCCGTGTCAGAAGCAGACGGCTGTGAAGTGCCGATGCGGCCACATGGACCAGATGATCAAGTGTCGCCAGCTGTCCACCCGGGCCGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGTTGCATAGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGTACTCTGAGCTGTGGCAAACACAAGTGTGACCAGCCCTGTCATCGCGGGAATTGTCCTCCCTGCTACCGCAGCAGCTTCGAAGAGCTCTTCTGCGAGTGTGGAGCCGAGGTCATCTATCCGCCGGTGCCCTGCGGCACGAAGAAACCGCTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGATCATACACCGCAGCACAATTGCCATTCGGCGGCCACTTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCAATCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGCGGTCTGTCCTGCGGCAAGCCCCTCTCCTGTGGCCGTCACAAATGCATCAAGCCCTGTCACGAGGGGGCCTGTCAATCATCACCAAGCGAGATCTGCCGCCAGAGTTGTACCAAACCGCGCACGCTCTGCGGCCACAAGTGTGCGTCTGCCTGCCACGAGGGAGCATGCCCCGAGACACCATGCAAGGAGCTGGTGGATGTGCAGTGCGAGTGTGGCAACCGGAAGCTAAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCATAGTCGCATCGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTGGCACCGGCCAAAGTCAACAAGTCGAACAGAACACTGGACTGCAACGACGAGTGTCGTGTGTTGGAACGGAATCGCCGTTTGGCACAGGCCCTGCAGTCGCGCAATCCGGATACCCAGCAGAAATCTCTAACCAAATATTCAGAGTTTTTGCGGGGATTTGCCAAACGGAATCAGGCACTGACCAAGAGCGTGTACGAGACGTTGACAGATCTGGTAAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCTTTCCCAACGATGAACCGGGAGAAGAGGCAGATGGTGCACGAATTGTGCGAGATCTTCGGCATTGAGTCGGTGTCGTATGACAAGGAACCGAATCGAAATGTGGTGGCCACGGCACACAAGGAAAGGtgctggctgcctgccacaaGCATTATGGAGGTGTTGGCCCGTGAGTCTGGACAGCGTCGCGTCCCCGTGCCCAGCAACAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MDANSNGNDGGSNNNYVSFNQFIMQHNLAANAGSALPYHLLANNANYTVGGGGGAFGLTPSSSGSTAAGGDVSNSFGNFYSQPSAAFPSYQNGDGVAASSAGFNNSYGVGNMNMGAFSNVYTPFGSNPFDFSASKLQASAPEFVPNMMKLTLEESSGLTNGNSTASFETAMNEGVQAATQRPDLHGAADNRGSATGGGPKPRSNHNYALPTERDRDRERDRDRERDRDRDRDRERDFRSGGTRQQRRGDYRDDREERREDRYDRNDRNERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQLQQISPRRAPPPPENEKLSQREKLIRDIEQRRLECLVCVETIKAHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRNYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCQKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLSCGRHKCIKPCHEGACQSSPSEICRQSCTKPRTLCGHKCASACHEGACPETPCKELVDVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNRTLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -