Basic Information

Insect: Drosophila algonquin
Gene Symbol: stc
Assembly: GCA_035041765.1
Location: JAWNKY010002539.1:23599-27235[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2e+04 -4.2 1.6 15 19 438 442 437 442 0.81

2 13 0.05 5.1e+02 1.0 2.2 4 11 471 478 470 479 0.91

3 13 6.2e-07 0.0063 16.7 15.1 1 19 483 500 483 500 0.93

4 13 4.4e-06 0.044 14.0 16.3 1 19 536 554 536 554 0.99

5 13 2 2e+04 -6.3 3.9 7 13 558 564 558 565 0.74

6 13 2e-09 2e-05 24.7 13.7 1 19 594 612 594 612 0.98

7 13 0.00015 1.5 9.1 18.0 4 19 660 675 653 675 0.88

8 13 0.075 7.6e+02 0.5 11.9 1 11 715 725 715 737 0.79

9 13 5e-10 5.1e-06 26.6 15.5 1 18 742 759 742 760 0.97

10 13 1.8 1.8e+04 -3.9 0.9 6 10 789 793 789 794 0.81

11 13 2 2e+04 -8.7 10.7 7 18 804 816 796 817 0.69

12 13 3.3e-09 3.4e-05 23.9 10.7 1 16 853 868 853 876 0.93

13 13 5.4e-07 0.0055 16.9 13.1 1 19 886 905 886 905 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2e+04	-4.2	1.6	15	19	438	442	437	442	0.81
2	13	0.05	5.1e+02	1.0	2.2	4	11	471	478	470	479	0.91
3	13	6.2e-07	0.0063	16.7	15.1	1	19	483	500	483	500	0.93
4	13	4.4e-06	0.044	14.0	16.3	1	19	536	554	536	554	0.99
5	13	2	2e+04	-6.3	3.9	7	13	558	564	558	565	0.74
6	13	2e-09	2e-05	24.7	13.7	1	19	594	612	594	612	0.98
7	13	0.00015	1.5	9.1	18.0	4	19	660	675	653	675	0.88
8	13	0.075	7.6e+02	0.5	11.9	1	11	715	725	715	737	0.79
9	13	5e-10	5.1e-06	26.6	15.5	1	18	742	759	742	760	0.97
10	13	1.8	1.8e+04	-3.9	0.9	6	10	789	793	789	794	0.81
11	13	2	2e+04	-8.7	10.7	7	18	804	816	796	817	0.69
12	13	3.3e-09	3.4e-05	23.9	10.7	1	16	853	868	853	876	0.93
13	13	5.4e-07	0.0055	16.9	13.1	1	19	886	905	886	905	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTACTGGCAGCAGACCAACGGTGGCGCGGGCGGAGGACCGGCCACCAATGAATCCTCAACGTCGTCGCGCGCCTTCAATGGCGATGGCCGTGATGGCATATCGGCAGCAGCTGGGGTGGCGATGGACGCCAACagcaacggcggcggcggcaacaacaactacgtGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACGCAGGCAGCGCATTGCCTTACCATCTCCTGGCTAACAACGCGAACTACACCGTCGGTGGGGGCGGAGGCGCCTTTGGACTAACGCCGTCCTCCTCGGGGAGCACCGCCGCCGGTGCCGACGTTTCGAATAGCTTTGGAAATTTCTATTCGCAGCCGCCTTTCGCGTCATATCAAAATGGCGATGGTAGTGTCGCCTCTAGTTCGGCGGGATTCGGCAACAGCTACGGGGTTGGAAACATGAGCATGGGCGCGTTCTCCAATGTGTACACGCCTTTTGGCAACAATCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCATCCGCACCGGAATTTGTGCCTAACATGATGAAGCTGAGTCTGGAGGAGTCGTCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATGAACGAGGGAGTCCAGGCTGCCACACAGCGTCCAGATCTACATGGAGCCGCCGACAATCGAGGAAGCGCCACAGGAGGTGGTCCAAAGCCAAGATCTAATCACAATTATGCCTTGCCCACCGAACGGGATCGAGACAGAGAGCGGGACCGCGACCGCGATCGGGATCGTGATAGAGACTTTCGGTCTGGCGGCACTCGTCAGCAGCGTCGCGGTGACTATCGCGAAGATCGCGAAGAGCGTCGCGAGGATCGATACGACCGCAATGATCGTAATGAACGCAAGAAGCCACAGAAGCAACAGAGCTATGACAATCATCGCAGCAATAAGCGGCGCGACGACTGGAACAGGAATAGGGATCGCATCAACGGATTTCCAAGAGCCGTCGACGACCTAGACACGAGCAATGAAAGCGCCCATCCATCGCccgagaagcagcagctgcagcagcagcaacagatctCGCCTCGTCGTCCTCCACCGCCGCCAGAAAACGAGAAGCTCTCGCAGCGAGAGAAACTGATCCGAGACATCGAACAGAGGCGACTGGAGTGCCTCGTGTGTGTGGAGACGATCAAGGCACACCATTCCACGTGGTCATGCCAGAACTGCTACCACGTGATCCATCTGAAGTGCACCATCACGTGGGCGAGTAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGATTTGCCACGGGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCCCGCAACGAGTTGGCCCACAGCTGTGGAGAGGTGTGCTGCCGCATCGAAGGGTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGACCCTGTCCGCCGTGTCAGGCGAATGTCGTGAggagctgcggctgcggcagaAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTCAAGTGCGGCGAGATCTGCGACAAGATATTGAACTGCGGCGAGCACCACTGCAAGGAGGAGTGTCACTCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGTCACTGCGGCAAGCAGGATCGTCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCAGCTACTCGTGCAAGGAGAGCTGCGGCCAGCCCCTGCCCTGTGGCAATCACAAGTGCAAGGATTCCTGTCACGCCGGTAACTGCAGacCCTGCAAACTGAGTCCCGAACAGATAACCAGTTGTCCCTGCGGAAAGATGCCCGTGCCGGCTGACCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGCATCTGTTCGCGAACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGACAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTGAAGTGCCGCTGCGGGCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCACGCGGGCCGACGATGCCCGCTGCAAGAAGCGGTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACCCTGAGCTGTGGCAAACACAAGTGCGATCAGCCCTGTCATCGCGGCAATTGTCCGCCCTGCTACCGCAGTAGCTTCGAGGAGCTCTTCTGCGAGTGCGGAGCCGAAGTCATCTATCCGCCAGTGCCGTGCGGCACGAAGAAACCGCTGTGCAAGCGTCCCTGCTCGCGCCAGCATCCGTGCGATCATACACCGCAGCACAATTGCCATTCGGCGGTCACCTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCAATCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGCCTGTCCTGCGGCAAGCCCCTTTCCTGTGGCCGTCACAAATGCATCAAGCCCTGCCACGAGGGGCCTTGTCAAGCATCACCAAGCGAGATCTGCCGCCAGAGCTGCACCAAACCGCGCGCGCTCTGCGGCCACAAGTGTGCGGCGGCCTGCCACGAGGGCGCCTGCCCAGAGACACCATGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGGAAGCTTAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCATAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAAATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTTGCACCGGCCAAGGTCAACAAGACAAACAAAACACTGGACTGCAATGATGAGTGTCGTGTTTTGGAACGGAATCGCCGCCTGGCACAGGCCCTGCAGTCACGCAATCCGGatacgcagcagcagaaaactcTGACCAAATATTCAGAGTTCTTGCGGGGATTTGCCAAACGCAATCAGGCGCTGACCAAGAGCGTGTACGAGACGTTGACCGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTCCCCACCATGAACCGGGAGAAGAGGCAGATGGTGCACGAATTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAACCGAATCGCAATGTGGTGGCCACGGCTCACAAGGAAAGGTGCTGGCTGCCTGCACAATCCATCATGGAGGTGTTGGCCCGTGAGTCCGGACAGCGACGCGTCCCCGTGCCCAGCAACAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MSEYWQQTNGGAGGGPATNESSTSSRAFNGDGRDGISAAAGVAMDANSNGGGGNNNYVSFNQFIMQHNLAANAGSALPYHLLANNANYTVGGGGGAFGLTPSSSGSTAAGADVSNSFGNFYSQPPFASYQNGDGSVASSSAGFGNSYGVGNMSMGAFSNVYTPFGNNPFDFSASKLQASAPEFVPNMMKLSLEESSGLTNGNSTASFETAMNEGVQAATQRPDLHGAADNRGSATGGGPKPRSNHNYALPTERDRDRERDRDRDRDRDRDFRSGGTRQQRRGDYREDREERREDRYDRNDRNERKKPQKQQSYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQLQQQQQISPRRPPPPPENEKLSQREKLIRDIEQRRLECLVCVETIKAHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRSYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPADQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAVTCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLSCGRHKCIKPCHEGPCQASPSEICRQSCTKPRALCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKTNKTLDCNDECRVLERNRRLAQALQSRNPDTQQQKTLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPAQSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -