Basic Information

Insect: Drosophila subsilvestris
Gene Symbol: stc_1
Assembly: GCA_035043285.1
Location: JAWNNB010001719.1:2195479-2199082[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.2 1.6 15 19 426 430 425 430 0.81

2 14 0.049 4.8e+02 1.0 2.2 4 11 459 466 458 467 0.91

3 14 1.4e-06 0.014 15.5 15.3 3 19 472 488 471 488 0.92

4 14 1.2 1.2e+04 -3.4 0.6 5 10 513 518 513 518 0.88

5 14 4.3e-06 0.042 14.0 16.3 1 19 524 542 524 542 0.99

6 14 2 1.9e+04 -6.3 3.9 7 13 546 552 546 553 0.74

7 14 2e-09 1.9e-05 24.7 13.7 1 19 582 600 582 600 0.98

8 14 0.00015 1.4 9.1 18.0 4 19 648 663 641 663 0.88

9 14 0.073 7.1e+02 0.5 11.9 1 11 703 713 703 725 0.79

10 14 4.9e-10 4.8e-06 26.6 15.5 1 18 730 747 730 748 0.97

11 14 1.7 1.7e+04 -3.9 0.9 6 10 777 781 777 782 0.81

12 14 2 1.9e+04 -8.5 11.7 4 18 789 804 784 805 0.75

13 14 1.5e-09 1.5e-05 25.0 10.1 1 17 841 857 841 864 0.95

14 14 5.4e-07 0.0052 16.9 13.1 1 19 874 893 874 893 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.2	1.6	15	19	426	430	425	430	0.81
2	14	0.049	4.8e+02	1.0	2.2	4	11	459	466	458	467	0.91
3	14	1.4e-06	0.014	15.5	15.3	3	19	472	488	471	488	0.92
4	14	1.2	1.2e+04	-3.4	0.6	5	10	513	518	513	518	0.88
5	14	4.3e-06	0.042	14.0	16.3	1	19	524	542	524	542	0.99
6	14	2	1.9e+04	-6.3	3.9	7	13	546	552	546	553	0.74
7	14	2e-09	1.9e-05	24.7	13.7	1	19	582	600	582	600	0.98
8	14	0.00015	1.4	9.1	18.0	4	19	648	663	641	663	0.88
9	14	0.073	7.1e+02	0.5	11.9	1	11	703	713	703	725	0.79
10	14	4.9e-10	4.8e-06	26.6	15.5	1	18	730	747	730	748	0.97
11	14	1.7	1.7e+04	-3.9	0.9	6	10	777	781	777	782	0.81
12	14	2	1.9e+04	-8.5	11.7	4	18	789	804	784	805	0.75
13	14	1.5e-09	1.5e-05	25.0	10.1	1	17	841	857	841	864	0.95
14	14	5.4e-07	0.0052	16.9	13.1	1	19	874	893	874	893	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTACTGGCACCAGACCAATGGCGCAGGCGGAGGACCGGCCACCAATGAATCCCCAACGCGTTCGTCATCGTCGCGCGCCTGCAATGGCGATGGCCGTGATGGCACttcggcagcagctgcggctgcgacGGATGCCAAccgaaacagcaacagcaacgggggcggcagcaacaacaactatgtGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACACAGGCGCATTGCCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGAGGCGCCTTCGGACTAACGCCGTCCTCCTCGGAGAGCACCGCCGCCGGTGGCGACGTTTCAAATAGCTTTGGAAATTTCTATTCGCAGCCGTCGGTATTCCCTCCGTCATATCAAAATGGCGATGGTGTCGCCGCCAGTTCGACGGCATTCGGCAACAGCTACGGGATGGGAAACATGAAGATGGCCCCGTTCACCATGAGCCCGTACTCCGATCTGTACACGCCTTTTGGCAACAATCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCATCCGCCCCAGAATTTGTGCCTAACATGATGAAGCTGAGCCTGGAGGAGTCCTCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAGCTGCCATGAACGAGGGCGCACCACAGCGTCCAGATCTACAAGGAGCCGCCGACCATCGTGGCAGCTCCACAGGAGGCGGACCAAAGCCAAGATCCAATCACAATTATGCCTTGCCCACCGAACGGGATCGTGAGAGAGACTTTCGGGGTGGCGGCAACCGTCAGCAGCGTCGAGGTGACTATCGCGATGATCGCGAGGATCGATACGACCGCAACAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAACAAGAGACGCGACGACTGGAACAGGAATCGTGATCGCATCAATGGATTTCCGAGAGCCGTCGATGACCTAGACACGAGCAACGAGAGCGCCCATCCGTCGCccgagaagcagcagcagcaacagatatCGCCACGCcgtgccacactgccaccgccgccgccgccagacAATGAGAAGCTCTCGCAGCGGGAGAAACTGATCCGAGACATCGAACAGCGGCGATTGGAGTGCCTCGTCTGTGTGGAGACCATCAAGTCGCACCATTCGACGTGGTCGTGTCAGAACTGCTACCACGTGATCCATCTGAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGATTTGCCCCGGGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCGCGCAACGAGCTGGCCCACAGCTGCGGAGAGGTGTGCTGCCGCATCGAAGGATGCACCCATGCTTGCACTCTGCTTTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTCGTGAgaagctgcggctgcggcagaAGCTCCCAGACAATGCAGTGCGCCATGAAGGAGGAGCTGAAGTGCGGCGAAGTCTGCGACAAGATATTAAACTGCGGCGAGCATCATTGCAAGGAGGAGTGCCACTCGGGCAAGTGTGCCGCCTGTCCGGAGCAAGTGGAGCagcactgccactgcggcAAGCAGGATCGTCAGGTGCAGTGTACGCGCGAGAGCCTCGACAAGCGCAACTACTCGTGCAAGGAGAGCTGCGGCCAGCCGCTGCCTTGTGGGAATCACAAGTGCAAGGATTCCTGTCACGCCGGAAACTGCAGaCCCTGCAAACTGAGTCCCGAGCAGATAACCAGCTGTCCCTGCGGCAAGATGCCCGTGCCGGCTGACCAACGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGTATTTGCTCGCGAACACTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGGCAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTAAAGTGCCGATGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCAGCCGAGCGGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAATCGCACGCTGAGCTGTGGGAAACACAAGTGCGACCAGCCTTGTCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGAGCCGAGGTCATCTATCCGCCAGTGCCGTGCGGCACCAAGAAACCGTTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGACCATACACCGCAGCACAATTGTCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACGACAAAGTGGTGCCACGGCAACCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGCGGGCTGTCCTGCGGCAAGCCCCTGCCCTGTGGTCGTCACAAATGCATCAAGCCCTGCCACGAGGGCCCCTGTCAATCATCAGCAAGCGAGATTTGCCGCCAGAGCTGCACCAAGCCGCGCACGCTCTGCGGCCACAAGTGTGCGGCCGCCTGCCACGAGGGCGCCTGCCCGGAGACACCATGCAAGGAACTGGTGGAGGTACAGTGCGAGTGCGGCAATCGTAAGCTGAGTCGCAGCTGCCAGGAACTCGCACGCGAGCACAGTCGCATTGCCACCGCTCAACTGGCCTCCTCAATGGCCGAGATGTCGCGCGGGAATTACATGGAACTCAGCGAGATTCTGGCACCGGCCAAAGTCAACAAGTCGAACAGAACTCTGGACTGCAACGATGAGTGTCGTGTGTTGGAACGGAATCGCCGCCTGGCACAGGCCCTGCAGTCGCGCAATCCGGACACGCAGCAGAAATCTCTGACCAAGTATTCAGAGTTCTTGCGGGGATTCGCCAAACGCAATCAGGCACTCACCAAGAGCGTGTACGAGACGTTGACAGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTTCCCACCATGAACCGGGAGAAGCGGCAGATGGTGCACGAGCTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCACACAAGGAAAGGtgctggctgcctgccacaagCATTATGGAGGTGTTGGCCCGTGAGTCCGGACAGCGACGCGTTCCCGTGCCCAGCAATAATGCTTGGGGGCTGAAAAAGTAG
Protein Sequence: MSEYWHQTNGAGGGPATNESPTRSSSSRACNGDGRDGTSAAAAAATDANRNSNSNGGGSNNNYVSFNQFIMQHNLAANTGALPYHLLANNANYTVGGGGGAFGLTPSSSESTAAGGDVSNSFGNFYSQPSVFPPSYQNGDGVAASSTAFGNSYGMGNMKMAPFTMSPYSDLYTPFGNNPFDFSASKLQASAPEFVPNMMKLSLEESSGLTNGNSTASFEAAMNEGAPQRPDLQGAADHRGSSTGGGPKPRSNHNYALPTERDRERDFRGGGNRQQRRGDYRDDREDRYDRNKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQQQQISPRRATLPPPPPPDNEKLSQREKLIRDIEQRRLECLVCVETIKSHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCTHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEVCDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRNYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPADQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLPCGRHKCIKPCHEGPCQSSASEICRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNRTLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -