Basic Information

Insect: Drosophila ambigua
Gene Symbol: stc
Assembly: GCA_018150905.1
Location: JAECWS010000100.1:17519661-17523369[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.5e+04 -4.2 1.6 15 19 457 461 456 461 0.81

2 13 0.05 3.8e+02 1.0 2.2 4 11 490 497 489 498 0.91

3 13 6.1e-07 0.0046 16.7 15.1 1 19 502 519 502 519 0.93

4 13 4.3e-06 0.033 14.0 16.3 1 19 555 573 555 573 0.99

5 13 2 1.5e+04 -6.3 3.9 7 13 577 583 577 584 0.74

6 13 2e-09 1.5e-05 24.7 13.7 1 19 613 631 613 631 0.98

7 13 0.00015 1.1 9.1 18.0 4 19 679 694 672 694 0.88

8 13 0.074 5.6e+02 0.5 11.9 1 11 734 744 734 756 0.79

9 13 5e-10 3.8e-06 26.6 15.5 1 18 761 778 761 779 0.97

10 13 1.8 1.3e+04 -3.9 0.9 6 10 808 812 808 813 0.81

11 13 2 1.5e+04 -8.5 11.7 4 18 820 835 815 836 0.75

12 13 1.5e-09 1.1e-05 25.1 10.1 1 17 872 888 872 895 0.91

13 13 5.4e-07 0.0041 16.9 13.1 1 19 905 924 905 924 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.5e+04	-4.2	1.6	15	19	457	461	456	461	0.81
2	13	0.05	3.8e+02	1.0	2.2	4	11	490	497	489	498	0.91
3	13	6.1e-07	0.0046	16.7	15.1	1	19	502	519	502	519	0.93
4	13	4.3e-06	0.033	14.0	16.3	1	19	555	573	555	573	0.99
5	13	2	1.5e+04	-6.3	3.9	7	13	577	583	577	584	0.74
6	13	2e-09	1.5e-05	24.7	13.7	1	19	613	631	613	631	0.98
7	13	0.00015	1.1	9.1	18.0	4	19	679	694	672	694	0.88
8	13	0.074	5.6e+02	0.5	11.9	1	11	734	744	734	756	0.79
9	13	5e-10	3.8e-06	26.6	15.5	1	18	761	778	761	779	0.97
10	13	1.8	1.3e+04	-3.9	0.9	6	10	808	812	808	813	0.81
11	13	2	1.5e+04	-8.5	11.7	4	18	820	835	815	836	0.75
12	13	1.5e-09	1.1e-05	25.1	10.1	1	17	872	888	872	895	0.91
13	13	5.4e-07	0.0041	16.9	13.1	1	19	905	924	905	924	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAGCAGACCAATGGCGCAGGCGGAGGAGCGGCCAACAATGAATCCTCAGCGCGTTCGTCGTCGTCGCGCGCCTGCAATGGCGATGGCCGTGATGGCAGCTCGGCAGCGGCGGCGGCTGCGTCGGATGCCAACAGAAACGGCAACAGCAACGGCAACGCGGGCGGCAGCAACAACAACTATGTGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACACAGGCGCATTGCCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGTGGCGCCTTCGGACTAACGCCGTCCTCCTCGGAGAGCACCGCCGCCGGTGGCGACGTTTCAAATAGCTTTGGAAATTTCTTTTCGCAGCCGGCGGTATTCCCTCCGCCATATCAAAATGGCGATGGTGTGGCCGCCAGTTCGGCGGCATTCGGCAACAGCTACGGGGTGGGAAACATGCAGATGGGCCCGTTCTCCAATCTGTACACGCCTTTTGGCAACAATCCGTTCGACTTTAGCGCCTCCAAGCTGCAGGCATCCGCCCCAGAGTTTGTGCCCAACATGTTGAAGCTGAGCCTGGAGGAGTCCTCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATCAACGAGGGCGCGCCACAGCGTCCAGATCTACAGGGAGCCGCCGACCATCGCGGCAGCTCCACAGGAGGCGGAGGCGGACCAAAGCCAAGATCCAATCACAATTATGCCTTGCCCACCGAACGGGATCGTGATAGAGAGCGTGATCGTGACCGTGAGCGGGACCGTGACCGAGAGCGGGACCGCGACCGTGACCGAGATCGGGATCGTGAGAGAGATTTTCGGTCTGGCGGCAGCCGTCAGCAGCGTCGCGGTGACTATCGCGATGAACGCGAGGATCGATACGACCGCAATGATCGCAACGAACGCAACAAGAAGCCACAGAAGCAGCAGCGCTATGACAATCATCGCAGCAACAAGAGACGCGACGACTGGAACAGGAATCGGGATCGCATCAACGGCTTTCCGAGAGCCGTCGATGACCTGGACACGAGCAATGAGAGCGCCCATCCCTCGCCCGAGAAGCAGCAGCAGCAACAGATATCGCCACGCCGCGCCACGCTGCCACCGCCGCCGCCGCCAGACAACGAGAAGCTCTCGCAGCGGGAGAAACTGATCCGAGACATCGAACAGCGGCGATTGGAGTGCCTCGTCTGTGTGGAGACCATCAAGTCACACCACTCGACGTGGTCGTGCCAGAACTGCTACCACGTGATCCATCTGAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGACTTGCCCCGGGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCGCGCAACGAGCTGGCCCACAGCTGCGGAGAGGTGTGCTGCCGCATCGAGGGATGTAGTCATGCGTGCACCCTGCTGTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTGGTGAGGAGCTGCGGCTGCGGCCGCAGCTCACAGACGATGCAGTGCGCCATGAAGGAGGAGCTGAAGTGCGGCGAGATCTGCGACAAGATACTGAACTGCGGCGAGCATCACTGCAAGGAGGAGTGCCACTCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGTCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCCACTACTCGTGCAAGGACAGCTGCGGCCAGCCGCTGCCCTGTGGCAATCACAAGTGCAAGGACTCCTGTCACGCCGGAAACTGCAGACCCTGCAAGCTGAGTCCCGAGCAGATAACCAGCTGTCCCTGCGGCAAGATGCCCGTGCCGGCTGAGCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGCATCTGCTCGCGTACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCACCTGGGGCAGTGTCCGCCGTGTCCCAAGCAGACGGCCGTCAAGTGCCGATGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCAGTCGAGCGGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACGCTGAGCTGTGGCAAGCACAAGTGCGACCAGCCATGTCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTATTGTGAGTGTGGAGCGGAGGTCATCTATCCGCCAGTGCCCTGCGGCACCAAGAAACCGTTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGACCATACACCGCAGCACAACTGTCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAACCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGACTGTCCTGCGGCAAGCCGCTGCCCTGCGGGCGTCACAAATGCATCAAGCCCTGCCACGAGGGCCCCTGTCAGACAGCAGCGAGCGAGGTTTGCCGCCAGAGCTGCACCAAGCCGCGCACGCTCTGCGGCCACAAGTGTGCGGCTGCCTGCCACGAGGGCGCCTGCCCGGAGACACCGTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGTAAGCTGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATAACGCTGGACTGCAACGATGAGTGTCGCGTGCTGGAACGGAATCGCCGCCTGGCACAGGCCCTGCAGTCGCGCAATCCGGACACGCAGCAGAAATCTCTGACCAAGTATTCAGAGTTCTTGCGGGGATTCGCCAAGCGGAATCAGGCGCTGACCAAGAGCGTGTACGAGACGCTGACGGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTCCCCACCATGAACCGGGAGAAGCGGCAGATGGTGCACGAGCTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCACACAAGGAAAGGTGCTGGCTGCCTGCCACGAGCATTATGGAGGTGCTGGCCCGTGAGTCCGGACAGCGACGCGTGCCCGTGCCCAGCAATAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MAEYWQQTNGAGGGAANNESSARSSSSRACNGDGRDGSSAAAAAASDANRNGNSNGNAGGSNNNYVSFNQFIMQHNLAANTGALPYHLLANNANYTVGGGGGAFGLTPSSSESTAAGGDVSNSFGNFFSQPAVFPPPYQNGDGVAASSAAFGNSYGVGNMQMGPFSNLYTPFGNNPFDFSASKLQASAPEFVPNMLKLSLEESSGLTNGNSTASFETAINEGAPQRPDLQGAADHRGSSTGGGGGPKPRSNHNYALPTERDRDRERDRDRERDRDRERDRDRDRDRDRERDFRSGGSRQQRRGDYRDEREDRYDRNDRNERNKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQQQQISPRRATLPPPPPPDNEKLSQREKLIRDIEQRRLECLVCVETIKSHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQERQVQCTRESLDKRHYSCKDSCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPAEQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLPCGRHKCIKPCHEGPCQTAASEVCRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEITLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -