Basic Information

Insect: Drosophila bifasciata
Gene Symbol: stc
Assembly: GCA_009664405.1
Location: CM019042.1:44389185-44392811[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 1.5e+04 -4.2 1.6 15 19 438 442 437 442 0.81

2 12 0.05 3.7e+02 1.0 2.2 4 11 471 478 470 479 0.91

3 12 6.2e-07 0.0045 16.7 15.1 1 19 483 500 483 500 0.93

4 12 4.4e-06 0.032 14.0 16.3 1 19 536 554 536 554 0.99

5 12 2 1.5e+04 -6.3 3.9 7 13 558 564 558 565 0.74

6 12 2e-09 1.5e-05 24.7 13.7 1 19 594 612 594 612 0.98

7 12 0.00015 1.1 9.1 18.0 4 19 660 675 653 675 0.88

8 12 0.075 5.5e+02 0.5 11.9 1 11 715 725 715 737 0.79

9 12 5e-10 3.7e-06 26.6 15.5 1 18 742 759 742 760 0.97

10 12 2 1.5e+04 -11.1 14.8 4 18 801 816 793 817 0.74

11 12 3.9e-09 2.8e-05 23.7 9.0 1 17 853 869 853 876 0.95

12 12 5.8e-07 0.0043 16.8 13.6 1 19 886 905 886 905 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	1.5e+04	-4.2	1.6	15	19	438	442	437	442	0.81
2	12	0.05	3.7e+02	1.0	2.2	4	11	471	478	470	479	0.91
3	12	6.2e-07	0.0045	16.7	15.1	1	19	483	500	483	500	0.93
4	12	4.4e-06	0.032	14.0	16.3	1	19	536	554	536	554	0.99
5	12	2	1.5e+04	-6.3	3.9	7	13	558	564	558	565	0.74
6	12	2e-09	1.5e-05	24.7	13.7	1	19	594	612	594	612	0.98
7	12	0.00015	1.1	9.1	18.0	4	19	660	675	653	675	0.88
8	12	0.075	5.5e+02	0.5	11.9	1	11	715	725	715	737	0.79
9	12	5e-10	3.7e-06	26.6	15.5	1	18	742	759	742	760	0.97
10	12	2	1.5e+04	-11.1	14.8	4	18	801	816	793	817	0.74
11	12	3.9e-09	2.8e-05	23.7	9.0	1	17	853	869	853	876	0.95
12	12	5.8e-07	0.0043	16.8	13.6	1	19	886	905	886	905	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTACTGGCAACAGACCAATGGCGCAGGCGGAGGACCGGCCACCAATGAATCCTCAACGCATTCGTCGTCGCGCGCCTGCAATGGTGATGGCCGTGATGGCAACTCGGCaccagcggcagcggctgcgACGGatgccagcaacagcaacagcaacaacaactatgtGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACACGGGCGCATTGCCCTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGTGGCGCCTTCGGACTAACGCCATCCTCCTCGGGGAGCACCGCCGCCGGTGGCGACGTTTCAAATAGCTTTGGAAATTTCTATACACAGCCGGCGGTATTCACTCCGTTATATAAAAATGGTGGCGATGGTGGTGCCGCCGCCAGTTCGACGGCATTCGGCAGCAGCTACGGGGTGGGAATGAGTCCGTTCTCCAATCTGTACACGCCTTTTGGCAACAATCCGTTTGATTTTAGCACCTCCAAGCTGCAGGCATCCGCCCCAGAGTTTGTGCCCAACATGATGAAGCTGAGCCTGGAGGAGTCCTCGGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATGAACGAGGGCGCACAACAGCGCCCAGATCTACAGGGAGCCGCCGAGCATCGTGGCAGCTCCGCAGCAGGCGGACCAAAGCCAAGATCTAATCACAATTATGCCTTGCCCACCGAACGGGATCGTGACAGAGAGCGAGAtcgtgagagagagcgggatCGCGACAGAGAGCGTGATCGGGATAGAGACTTTCGGTCTAGCGGCAACCGGCAGCAGCGTCGCGGTGATTATCGCGAGGATCGCTACGACCGCAACGATCGTAACGAACGCAACAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAACAAGAGGCGCGACGACTGGAACAGGAATCGGGATCGCATCAACGGGTTTCCGAGAGCCGTCGATGACCTGGACACGAGCAATGAGAGCGCCCATCCGTCGCccgagaagcagcagcagcagcaacaacagataTCGCCACGCCGTGccccgctgccgccgccaccgccgccgccagacAATGAGAAGCTCTCGCAGCGGGAGAAACTGATCCGAGACATCGAACAGAGGCGACTGGAGTGCCTCGTCTGTGTGGAGACCATCAAGTCACACCATTCGACGTGGTCGTGCCAGAACTGCTACCATGTGATCCATCTGAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGATCTGCCGCGGGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCGCGCAACGAGTTGGCCCACAGCTGCGGCGAGGTGTGCTGCCGCATCGAGGGATGCAGCCATGCGTGCACCTTGCTCTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTTGTGCGGAGTTGCGGCTGCGGCAGAAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTGAAGTGCGGCGAGATCTGCGACAAGATTCTAAACTGCGGCGAGCATCACTGCAAGGAGGAGTGCCACTCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGCCACTGCGGCAAGCAGGATCGGCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCAACTACTCGTGCAAGGAGAGCTGCGGCCAGCCGCTGCCTTGTGGTAATCACAAGTGCAAGGATTCCTGTCACGCCGGAAACTGCAGACCCTGCAAACTGAGTCCCGAGCAGATAACCAGCTGTCCTTGCGGCAAGATGCCCGTGCCGGCTGACCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAAGGTATCTGCTCGCGGACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGTCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTCAAGTGCCGTTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAGCTGTCCAGCCGAGCGGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACGCTGAGCTGTGGCAAACACAAGTGCGACCAGCCTTGTCATCGCGGCAACTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGAGCCGAGGTCATCTATCCGCCAGTGCCCTGCGGCACCAAGAAACCGCTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGAGCATACACCGCAGCACAATTGTCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAACCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGCGGCCTGTCGTGCGGCCAGCCCCTGCCTTGTGGGCGTCACAAATGCATCAAGCCCTGCCACGAGGGCGCCTGTCAATCATCAGCAAGCGAGATTTGCCGCCAGAGCTGCACCAAGCCGCGCACGCTCTGCGGCCACAAGTGTGCGTCTGCCTGCCACGAGGGCGCCTGCCCGGAGACACCGTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGTAAGCTGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAAATGTCGCGCGGCAACTACATGGAACTCAGCGAGATTCTCGCACCGGCCAAGGTCAACAAGTCGAACAGAACTCTGGACTGCAACGACGAGTGTCGTGTGCTGGAGCGGAATCGACGCCTGGCCCAGGCCCTGTCGTCGCGCAATCCGGACACGCAGCAGAAATCTCTGACCAAGTATTCAGAGTTCCTGCGCGGTTTTGCCAAACGGAATCAGGCACTGACCAAGAGCGTATACGAGACGCTGACGGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTCCCCACCATGAACCGGGAGAAGCGACAGATGGTGCACGAACTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCACACAAGGAAAGGtgctggctgcctgccacaaGCATTATGGAGGTGCTGGCCCGTGAATCCGGACAGCGACGTGTGCCCGTGCCCAGCAATAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MSEYWQQTNGAGGGPATNESSTHSSSRACNGDGRDGNSAPAAAAATDASNSNSNNNYVSFNQFIMQHNLAANTGALPYHLLANNANYTVGGGGGAFGLTPSSSGSTAAGGDVSNSFGNFYTQPAVFTPLYKNGGDGGAAASSTAFGSSYGVGMSPFSNLYTPFGNNPFDFSTSKLQASAPEFVPNMMKLSLEESSGLTNGNSTASFETAMNEGAQQRPDLQGAAEHRGSSAAGGPKPRSNHNYALPTERDRDRERDRERERDRDRERDRDRDFRSSGNRQQRRGDYREDRYDRNDRNERNKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQQQQQQISPRRAPLPPPPPPPDNEKLSQREKLIRDIEQRRLECLVCVETIKSHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRNYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPADQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCEHTPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGQPLPCGRHKCIKPCHEGACQSSASEICRQSCTKPRTLCGHKCASACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNRTLDCNDECRVLERNRRLAQALSSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -