Basic Information

Insect: Drosophila affinis
Gene Symbol: stc
Assembly: GCA_037356375.1
Location: CM074800.1:3795413-3799053[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.2e+04 -4.2 1.6 15 19 439 443 438 443 0.81

2 13 0.05 5.6e+02 1.0 2.2 4 11 472 479 471 480 0.91

3 13 6.2e-07 0.0069 16.7 15.1 1 19 484 501 484 501 0.93

4 13 4.4e-06 0.049 14.0 16.3 1 19 537 555 537 555 0.99

5 13 2 2.2e+04 -6.3 3.9 7 13 559 565 559 566 0.74

6 13 2e-09 2.2e-05 24.7 13.7 1 19 595 613 595 613 0.98

7 13 0.00015 1.7 9.1 18.0 4 19 661 676 654 676 0.88

8 13 0.075 8.4e+02 0.5 11.9 1 11 716 726 716 738 0.79

9 13 5e-10 5.6e-06 26.6 15.5 1 18 743 760 743 761 0.97

10 13 1.8 2e+04 -3.9 0.9 6 10 790 794 790 795 0.81

11 13 2 2.2e+04 -8.7 10.7 7 18 805 817 797 818 0.69

12 13 3.3e-09 3.7e-05 23.9 10.7 1 16 854 869 854 877 0.93

13 13 5.4e-07 0.0061 16.9 13.1 1 19 887 906 887 906 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.2e+04	-4.2	1.6	15	19	439	443	438	443	0.81
2	13	0.05	5.6e+02	1.0	2.2	4	11	472	479	471	480	0.91
3	13	6.2e-07	0.0069	16.7	15.1	1	19	484	501	484	501	0.93
4	13	4.4e-06	0.049	14.0	16.3	1	19	537	555	537	555	0.99
5	13	2	2.2e+04	-6.3	3.9	7	13	559	565	559	566	0.74
6	13	2e-09	2.2e-05	24.7	13.7	1	19	595	613	595	613	0.98
7	13	0.00015	1.7	9.1	18.0	4	19	661	676	654	676	0.88
8	13	0.075	8.4e+02	0.5	11.9	1	11	716	726	716	738	0.79
9	13	5e-10	5.6e-06	26.6	15.5	1	18	743	760	743	761	0.97
10	13	1.8	2e+04	-3.9	0.9	6	10	790	794	790	795	0.81
11	13	2	2.2e+04	-8.7	10.7	7	18	805	817	797	818	0.69
12	13	3.3e-09	3.7e-05	23.9	10.7	1	16	854	869	854	877	0.93
13	13	5.4e-07	0.0061	16.9	13.1	1	19	887	906	887	906	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTACTGGCAGCAGACCAACGGTGGCGCGGGCGGAGGACCGGCTACCAATGAATCCTCAACGTCGTCGCGCGCCTTCAATGGCGATGGCCGCGATGGCATATCGGCAGCAGCCGGGGTGGCGATGGACGCCAACAgcaacggcggcggcggcaacaacaactacgtGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACGCAGGCAGCGCATTGCCTTACCAACTCCTGGCTAACAACGCGAACTACACCGTCGGTGGGGGCGGAGGCGCCTTTGGACTAACGCCGTCCTCCTCGGGGAGCACTGCCGCCGGTGGCGACGTTTCGAATAGCTTTGGAAATTTCTATTCGCAGCCGTCTTTCGCGTCATATCAAAATGGCGATGGTAGTGTCGCCGCTAGTTCGGCGGGATTCGGCAACAGCTACGGGGTTGGAAACATGAGCATGGGCGCGTTCTCCAATATGTACACGCCTTTCGGCAACAACCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCTTCCGCACCGGAATTCGTTCCTAACATGATGAAGCTGAGTCTGGAGGAGTCATCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATGAACGAGGGAGTCCAGGCTGCCACACAGCGTCCAGATCTACATGGAGCCGCCGACAATCGAGGAAGCGCCACAGGAGGCGGTCAAAAGCCAAGATCTAATCACAATTATGCCTTGCCCACCGAACGGGATCGAGACAGAGAGCGGGACCGCGACCGCGATCGGGATCGTGATAGAGACTTTCGGTCTGGCGGCACTCGTCAGCAGCGTCGCGGTGACTATCGCGAAGATCGCGAAGAGCGTCGCGAGGATCGATACGACCGCAATGATCGTAATGAACGCAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAACAAGCGGCGCGACGACTGGAACAGGAATAGGGATCGCATCAACGGATTTCCAAGAGCCGTCGACGACCTAGACACGAGCAATGAAAGCGCCCATCCATCGCccgagaagcagcagctgcagcagcagcagcaacagatcTCGCCTCGTCGTGCTCCACCGCCGCCAGAAAACGAGAAGCTCTCGCAGCGAGAGAAACTGATTCGAGACATCGAACAGAGGCGATTGGAGTGCCTCGTCTGTGTAGAGACGATCAAGGCACACCATTCCACGTGGTCATGCCAGAACTGCTACCACGTGATCCACCTGAAGTGCACCATCACGTGGGCGAGTAGTTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAATTGCCACGGGAGTATCTGTGCTTCTGCGGCAAGCTCAAGAATCCGACAGTGTCGCGCAACGAGTTGGCCCACAGCTGCGGCGAGGTGTGCTGCCGCATCGAAGGGTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGACCCTGTCCGCCGTGTCAGGCGAATGTCGTGAggagctgcggctgcggcagaAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTCAAGTGCGGCGAGATCTGCGACAAGATATTGAACTGCGGCGAGCACCACTGCAAGGAGGAGTGTCACTCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGTCACTGCGGCAAGCAGGATCGTCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCAGCTACTCGTGCAAGGAGAGCTGCGGCCAGCCCCTGCCCTGTGGCAATCACAAGTGCAAGGATTCCTGTCACGCCGGTAACTGCAGacCCTGCAAACTGAGTCCCGAACAGATAACCAGTTGTCCCTGCGGGAAGATGCCCGTGCCGGCTGACCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGCATCTGCTCGCGAACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTGAAGTGCCGCTGCGGGCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCACGCGGGCCGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACCCTGAGCTGTGGCAAGCACAAGTGCGACCAGCCCTGTCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTTCTGCGAGTGCGGAGCCGAGGTCATCTATCCGCCAGTGCCGTGCGGCACGAAGAAACCGCTGTGCAAGCGTCCCTGCTCGCGCCAGCATCCGTGCGATCATACACCGCAGCACAATTGCCATTCGGCGGTCACCTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCAATCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGCTTGTCCTGCGGCAAGCCCCTCTCATGTGGCCGTCACAAATGCATCAAGCCCTGCCACGAGGGACCTTGTCAAGCATCACCAAGCGAGATTTGCCGCCAGAGCTGCACCAAACCGCGCACGCTCTGCGGCCACAAGTGTGCGGCGGCCTGCCACGAGGGCGCCTGCCCAGAGACACCATGCAAAGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGGAAGCTGAGTCGCAGCTGCCAGGAGTTGGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAAATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTTGCACCGGCCAAGGTCAACAAGACAAACAAAACACTGGACTGCAATGATGAATGTCGTGTGTTGGAACGGAATCGCCGCCTGGCACAGGCCCTGCAGTCGCGCAATCCGGATACACAGCCGCAGAAAACTCTGACCAAATATTCAGAGTTTTTGCGGGGATTTGCCAAACGGAATCAGGCACTGACCAAGAGCGTGTACGAGACGTTGACAGATCTGGTGAAGCTGGCGAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCGTTCCCCACCATGAACCGGGAGAAGAGACAGATGGTGCACGAATTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAACCGAATCGCAATGTGGTGGCCACGGCTCACAAGGAAAGGTGCTGGCTGCCTGCACAATCCATCATGGAGGTGTTGGCCCGTGAGTCCGGACAGCGACGCGTCCCCGTGCCCAGCAACAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MSEYWQQTNGGAGGGPATNESSTSSRAFNGDGRDGISAAAGVAMDANSNGGGGNNNYVSFNQFIMQHNLAANAGSALPYQLLANNANYTVGGGGGAFGLTPSSSGSTAAGGDVSNSFGNFYSQPSFASYQNGDGSVAASSAGFGNSYGVGNMSMGAFSNMYTPFGNNPFDFSASKLQASAPEFVPNMMKLSLEESSGLTNGNSTASFETAMNEGVQAATQRPDLHGAADNRGSATGGGQKPRSNHNYALPTERDRDRERDRDRDRDRDRDFRSGGTRQQRRGDYREDREERREDRYDRNDRNERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQLQQQQQQISPRRAPPPPENEKLSQREKLIRDIEQRRLECLVCVETIKAHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRSYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPADQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHTPQHNCHSAVTCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLSCGRHKCIKPCHEGPCQASPSEICRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKTNKTLDCNDECRVLERNRRLAQALQSRNPDTQPQKTLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPAQSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -