Basic Information

Insect: Drosophila persimilis
Gene Symbol: stc
Assembly: GCA_003286085.2
Location: NW:3369609-3398098[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 1.4e+04 -4.1 1.6 15 19 409 413 408 413 0.81

2 13 0.073 3.4e+02 1.1 2.2 4 11 442 449 441 450 0.91

3 13 9e-07 0.0042 16.7 15.1 1 19 454 471 454 471 0.93

4 13 6.3e-06 0.03 14.0 16.3 1 19 507 525 507 525 0.99

5 13 3 1.4e+04 -6.3 3.9 7 13 529 535 529 536 0.74

6 13 2.9e-09 1.4e-05 24.7 13.7 1 19 565 583 565 583 0.98

7 13 0.0003 1.4 8.7 17.4 4 19 631 646 624 646 0.87

8 13 0.09 4.2e+02 0.8 11.6 1 11 686 696 686 708 0.79

9 13 7.3e-10 3.4e-06 26.6 15.5 1 18 713 730 713 731 0.97

10 13 2.6 1.2e+04 -3.9 0.9 6 10 760 764 760 765 0.81

11 13 3 1.4e+04 -7.6 10.0 10 18 778 787 767 788 0.75

12 13 3.5e-09 1.6e-05 24.4 10.8 1 17 824 840 824 847 0.94

13 13 8.5e-07 0.004 16.8 13.6 1 19 857 876 857 876 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	1.4e+04	-4.1	1.6	15	19	409	413	408	413	0.81
2	13	0.073	3.4e+02	1.1	2.2	4	11	442	449	441	450	0.91
3	13	9e-07	0.0042	16.7	15.1	1	19	454	471	454	471	0.93
4	13	6.3e-06	0.03	14.0	16.3	1	19	507	525	507	525	0.99
5	13	3	1.4e+04	-6.3	3.9	7	13	529	535	529	536	0.74
6	13	2.9e-09	1.4e-05	24.7	13.7	1	19	565	583	565	583	0.98
7	13	0.0003	1.4	8.7	17.4	4	19	631	646	624	646	0.87
8	13	0.09	4.2e+02	0.8	11.6	1	11	686	696	686	708	0.79
9	13	7.3e-10	3.4e-06	26.6	15.5	1	18	713	730	713	731	0.97
10	13	2.6	1.2e+04	-3.9	0.9	6	10	760	764	760	765	0.81
11	13	3	1.4e+04	-7.6	10.0	10	18	778	787	767	788	0.75
12	13	3.5e-09	1.6e-05	24.4	10.8	1	17	824	840	824	847	0.94
13	13	8.5e-07	0.004	16.8	13.6	1	19	857	876	857	876	0.96

Sequence Information

Coding Sequence: ATGGATgccaacagcaacggcaacgacggcggcagcaacaacaactatgTGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACGCAGGCAGCGCATTACCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGTGGCGCCTTTGGATTAACGCCGTCCTCTTCGGGGAGCACCGCCGCCGGTGGCGACGTTTCAAATAGCTTTGGAAATTTCTATCCGCAGCCGTCGGCCGCATTCCCGTCATATCAAAATGGCGATGGTGTCGCCGCTAGCTCGGCGGCATTCAGCAACAGCTACGCGGTTGGAAACATGAACATGGGCGCCTTCTCCAATGTGTACACGCCTTTTGGCAACAATCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCATCAGCACCAGAATTTGTGCCTAACATGATGAAGCTGACTCTGGAGGAGTCGTCTGGCCTAACGAACGGCAACAGCACTGCCAGCTTTGAAACTGCCATGAGCGAGGGAGTCCAGGCAGCAATACATCGTCCAGATCTACATGGAGCCGCCGAAAATCGAGGAAACGCCTCAGGAGGCGGTCCTAAGCCAAGATCTAATCACAACTATGCCTTGCCCACCGAACGAGATCGTGACAGAGAACGGGAACGCGACAGAGAACGGGATCGCGACAGAGAGCGGGACCGCGACCGCGATCGAGATCGAGAGAGAGACTTTCGGTCTGGCGGCACACGTCAGCAGCGTCGCGGTGACTATCGCGATGATCGCGAAGAGCGTCGCGAGGATCGATACGACCGCAACGACCGTAACGAACGCAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAATAAGCGGCGCGACGACTGGAATCGCAATCGGGATCGCATCAACGGGTTTCCGAGAGCCGCCGATGACCTAGACACGAGCAATGAAAGCGCTCATCCCTCGCCCGAgaagcagcagctacagcagcaacagatcTCGCCACGCCGTGCCCCACCGCCGCCAGAAAACGAGAAGCTCTCGCAGAGAGAGAAACTGATTCGAGACATCGAACAGAGGCGATTGGAGTGCCTCGTCTGTGTGGAGACGATCAAGTCACACCATTCGACGTGGTCGTGCCAGAACTGCTACCACGTGATCCATCTGAAGTGCACCATCACCTGGGCGAGTAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGTTGCAGGATCTGCCACGGGAGTATCTGTGCTTTTGCGGCAAGCTCAAGAATCCGACAGTGTCCCGCAACGAGTTGGCCCACAGCTGCGGAGAGGTTTGCTGCCGCATCGAAGGATGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTCGTGAGAAGCTGCGGATGCGGCAGAAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTCAAGTGCGGCGAGATTTGCGACAAGGTATTGAACTGCGGTGAGCATCACTGCAAGGAGGAGTGTCACTCGGGCAAGTGCGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGCCACTGCGGCAAGCAGGATCGGCAGGTGCCATGCACGCGCGAGAGCCTCGACAAGCGCAACTATTCGTGCAAGGAGAGCTGCGGACAGCCCCTGCCCTGCGGCAATCACAAGTGCAAGGATTCTTGTCACGCCGGAAACTGCAGACCGTGCAAACTGAGCCCAGAGCAGATAACCAGCTGCCCCTGCGGCAAGATGCCCGTGCCGGCAGCTCAGCGCTCGAGCTGCCTGGATGCCATACCCACCTGCGAGGGTATCTGCTCGCGTACGCTGCGCTGTGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGGCAGTGCCCGCCGTGTCAGAAGCAGACGGCTGTGAAGTGCCGATGCGGCCACATGGACCAGATGATCAAGTGTCGCCAGCTGTCCACCCGGGCCGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATAGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGTACCCTGAGCTGTGGCAAGCACAAGTGTGACCAGCCCTGTCATCGCGGGAATTGTCCTCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTTCTGCGAGTGTGGAGCCGAGGTCATCTATCCGCCGGTGCCCTGCGGGACGAAGAAGCCGCTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGATCATTCACCGCAGCACAATTGCCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCAATCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGCCTGTCCTGTGGCAAGCCCCTCCCATGTGGCCGTCACAAATGCATCAAGCCCTGTCACGAGGGGCCCTGTCAATCATCACCAAGCGACATCTGCCGCCAGAGCTGCACCAAACCGCGCACGCTCTGCGGCCACAAGTGTGCGTCTGCCTGCCACGAGGGAGCATGCCCCGAGACACCATGCAAGGAGCTGGTGGATGTGCAGTGCGAGTGCGGCAACCGGAAGCTAAGTCGCAGCTGCCAGGAGCTGGCTCGCGAGCACAGTCGCATCGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTGGCACCGGCCAAGGTCAACAAGTCGAACAGAACACTGGACTGCAACGACGAGTGTCGTGTGTTGGAACGGAATCGCCGTTTGGCACAGGCCCTACAATCGCGCAATCCGGATACGCAGCAGAAATCTCTAACCAAATATTCAGAGTTTTTGCGTGGTTTTGCCAAACGGAATCAGGCACTGACCAAGAGCGTGTACGAGACATTGACAGATCTGGTGAAGCTTGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCTTTCCCAACGATGAACCGGGAGAAGAGGCAGATGGTGCACGAATTGTGCGAGATCTTCGGCATTGAGTCGGTGTCGTATGACAAGGAACCGAATCGCAATGTGGTGGCCACGGCACACAAGGAAAGGTGCTGGCTGCCTGCCACTAGCATTATGGAGGTGTTGGCCCGTGAGTCTGGACAGCGTCGCGTCCCCGTGCCCAGCAACAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MDANSNGNDGGSNNNYVSFNQFIMQHNLAANAGSALPYHLLANNANYTVGGGGGAFGLTPSSSGSTAAGGDVSNSFGNFYPQPSAAFPSYQNGDGVAASSAAFSNSYAVGNMNMGAFSNVYTPFGNNPFDFSASKLQASAPEFVPNMMKLTLEESSGLTNGNSTASFETAMSEGVQAAIHRPDLHGAAENRGNASGGGPKPRSNHNYALPTERDRDRERERDRERDRDRERDRDRDRDRERDFRSGGTRQQRRGDYRDDREERREDRYDRNDRNERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADDLDTSNESAHPSPEKQQLQQQQISPRRAPPPPENEKLSQREKLIRDIEQRRLECLVCVETIKSHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKVLNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVPCTRESLDKRNYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDAIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCQKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCDHSPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLPCGRHKCIKPCHEGPCQSSPSDICRQSCTKPRTLCGHKCASACHEGACPETPCKELVDVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNRTLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -