Basic Information

Insect: Drosophila helvetica
Gene Symbol: stc
Assembly: GCA_963969585.1
Location: OZ018402.1:60196882-60200580[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2.5e+04 -4.2 1.6 15 19 455 459 454 459 0.81

2 12 0.051 6.2e+02 1.0 2.2 4 11 488 495 487 496 0.91

3 12 6.3e-07 0.0077 16.7 15.1 1 19 500 517 500 517 0.93

4 12 4.4e-06 0.054 14.0 16.3 1 19 553 571 553 571 0.99

5 12 2 2.5e+04 -6.4 3.9 7 13 575 581 575 582 0.74

6 12 2e-09 2.5e-05 24.6 13.7 1 19 611 629 611 629 0.98

7 12 0.00015 1.8 9.1 18.0 4 19 677 692 670 692 0.88

8 12 0.076 9.3e+02 0.4 11.9 1 11 732 742 732 754 0.79

9 12 5.1e-10 6.2e-06 26.6 15.5 1 18 759 776 759 777 0.97

10 12 2 2.5e+04 -12.9 15.7 10 18 824 833 810 834 0.67

11 12 3.2e-09 3.9e-05 24.0 11.2 1 17 870 886 870 893 0.94

12 12 5.5e-07 0.0068 16.9 13.1 1 19 903 922 903 922 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2.5e+04	-4.2	1.6	15	19	455	459	454	459	0.81
2	12	0.051	6.2e+02	1.0	2.2	4	11	488	495	487	496	0.91
3	12	6.3e-07	0.0077	16.7	15.1	1	19	500	517	500	517	0.93
4	12	4.4e-06	0.054	14.0	16.3	1	19	553	571	553	571	0.99
5	12	2	2.5e+04	-6.4	3.9	7	13	575	581	575	582	0.74
6	12	2e-09	2.5e-05	24.6	13.7	1	19	611	629	611	629	0.98
7	12	0.00015	1.8	9.1	18.0	4	19	677	692	670	692	0.88
8	12	0.076	9.3e+02	0.4	11.9	1	11	732	742	732	754	0.79
9	12	5.1e-10	6.2e-06	26.6	15.5	1	18	759	776	759	777	0.97
10	12	2	2.5e+04	-12.9	15.7	10	18	824	833	810	834	0.67
11	12	3.2e-09	3.9e-05	24.0	11.2	1	17	870	886	870	893	0.94
12	12	5.5e-07	0.0068	16.9	13.1	1	19	903	922	903	922	0.96

Sequence Information

Coding Sequence: ATGTCGGAGTACTGGCAGCAGAGCAACGGTGGCGCAGGCGGAGGACCGGCCGCCAATGAATCCTCAGCGTCGTCGCACGCCTTCAATGGCGATGGCCGTAATGGCATctcggcagcggcagccggGGTGGCGATGAatgccaacagcaacagcaacggcaacggcggcggcggcaacaacaactatGTGAGTTTCAATCAGTTCATCATGCAGCACAATCTGGCAGCCAACGCAGGCAGCGCATTGCCTTACCATCTCCTGGCTAACAACGCGAATTACACCGTCGGTGGGGGCGGAGGCGCCTTTGGACTAACGCCGTCCTCCTCGGGAagcaccgccgccgccggtGCTGGTGCCGACGTTTCGAATAGCTTTGGAAATTTCTATTCGCAGCCGCCATTCGCGTCATATCAAAATGGCGATGGTAGTGCCACCGCTAGGTCGGCGGGATTCAGCAACAGCTACGGGGTTGGAAACATGGGCATGGGCGCGTTCTCCAATGTGTACACGCCTTTTGGCAACAATCCGTTTGATTTTAGCGCCTCTAAGCTGCAGGCATCCGCACCGGAATTCGTGCCCAACATGATGAAGCTGAGTTTGGAGGAGTCGTCTGGCCTGACGAACGGCAATAGCACTGCCAGCTTTGAAACTGCCATGAACGAGGGAGTCCAGGCTGCCACGCAGCGTCCAGATCTAGATGGAGCCGCCGACAATCGAGGAAGCGCCTCAGGAGGCGGTCCCAAGTCAAGATCTAATCACAACTATGCCTTGCCCACCGAACGGGATCGTGATAGAGAACGGGATCGAGACAGAGAGCGGGACCGAGACCGCGACCGGGATCGGGATAGGGAGAGAGACTTTCGGTCTGGCGGCACTCGTCAGCAGCGTCGAGGTGACTATCGCGACGATCGCGAAGAGCGTCGCGAGGATCGATACGACCGTAACGATCGTAATGAACGCAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGCAGCAATAAGCGGCGTGACGACTGGAATCGCAATCGGGATCGCATCAACGGATTTCCGAGAGCCGTCGACGACCTAGACACGAGCAATGAAAGCGCCCATCCGTCGCCcgagaagcagcagctgcagcagcagcagcaacagatcTCGCCACGTCGTGCCCCACCGCCGCCAGAAAACGAGAAGCTCTCGCAGCGGGAGAAACTGATCCGAGACATCGAACAGAGGCGACTGGAGTGCCTCGTCTGTGTGGAGACGATCAAGGCACACCATTCGACGTGGTCGTGCCAGAACTGCTACCACGTGATCCATCTGAAGTGCACTATCACGTGGGCGAGTAGCTCCAAGTCGGATGTGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGATTTGCCGCGTGAGTATCTGTGCTTTTGCGGCAAGCTCAAGAATCCGACAGTGTCCCGCAACGAGCTGGCCCACAGCTGCGGAGAGGTGTGCTGCCGCATCGAAGGGTGCAGCCACGCGTGCACGCTGCTCTGCCATCCCGGACCCTGTCCGCCGTGCCAGGCGAATGTGGTGAggagctgcggctgcggcagaAGCTCCCAGACGATGCAGTGCGCCATGAAGGAGGAGCTCAAGTGCGGCGAGATCTGCGACAAGATATTGAACTGCGGCGAGCATCACTGCAAGGAGGAGTGTCATTCGGGCAAGTGTGCCGCCTGCCCGGAGCAAGTGGAGCAGCACTGTCACTGCGGCAAGCAGGATCGTCAGGTGCAGTGCACGCGCGAGAGCCTCGACAAGCGCAACTACTCGTGCAAGGAGAGCTGCGGCCAGCCCCTGCCCTGTGGCAATCACAAGTGCAAGGACTCCTGTCACGCCGGTAACTGCAGACCCTGCAAACTGAGCCCCGAGCAGATAACCAGCTGTCCGTGCGGAAAGATGCCCGTGCCGGCTGACCAGCGCTCGAGCTGCCTGGATCCCATACCCGTCTGCGAGGGCATCTGCTCGCGAACGCTGCGCTGCGGCAAGCCAGCCCATCCGCATCAGTGTGGCAGCAAGTGCCATCTGGGACAGTGTCCGCCGTGTCCCAAGCAGACGGCTGTGAAGTGCCGATGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCACGCGGGCCGACGATGCCCGCTGCAAGAAGCGCTGCATCAAGAAGCGGAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCGTGCAACCGCACCCTGAGTTGTGGCAAACACAAGTGCGACCAGCCCTGTCATCGCGGCAATTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTTCTGCGAGTGCGGAGCCGAGGTCATCTATCCGCCAGTGCCGTGCGGCACGAAGAAGCCGCTGTGCAAGCGTCCGTGCTCGCGCCAGCATCCGTGCGAGCATCCGCCGCAGCACAATTGCCATTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACGACGAAGTGGTGCCACGGCAATCACGAACAACGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGCCTGTCCTGCGGCAAGCCCCTCTCCTGTGGCCGTCACAAATGCATCAAGCCCTGCCACGAGGGGCCCTGCCAATCGTCACCAAGCGAGATCTGTCGCCAGAGCTGCACCAAACCGCGCACGCTCTGCGGCCACAAGTGTGCGGCTGCCTGCCACGAGGGCGCCTGTCCAGAGACCCCATGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGGAAGCTGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCAATGGCCGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATCCTGGCACCGGCCAAGGTCAACAAGTCGAACAAAACCCTGGACTGCAACGACGAGTGTCGTGTGCTGGAACGGAATCGCCGCCTGGCCCAAGCGCTGCAGTCGCGCAATCCGGATACGCAGCAGAAATCTCTGACCAAATATTCAGAGTTTTTGCGGGGCTTTGCCAAGCGGAATCAGGCACTGACCAAGAGCGTGTACGAGACGCTGACAGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGCAGTCACTCCTTCCCCACCATGAACCGGGAGAAGCGGCAGATGGTGCACGAACTGTGCGAGATATTCGGCATTGAGTCGGTGTCGTATGACAAGGAACCGAATCGCAATGTGGTGGCCACGGCACACAAGGAAAGGtgctggctgcctgccacaAGCATTATGGAGGTGTTGGCCCGTGAGTCCGGACAGCGACGCGTCCCCGTGCCCAGCAACAATGCTTGGGGCCTGAAAAAGTAG
Protein Sequence: MSEYWQQSNGGAGGGPAANESSASSHAFNGDGRNGISAAAAGVAMNANSNSNGNGGGGNNNYVSFNQFIMQHNLAANAGSALPYHLLANNANYTVGGGGGAFGLTPSSSGSTAAAGAGADVSNSFGNFYSQPPFASYQNGDGSATARSAGFSNSYGVGNMGMGAFSNVYTPFGNNPFDFSASKLQASAPEFVPNMMKLSLEESSGLTNGNSTASFETAMNEGVQAATQRPDLDGAADNRGSASGGGPKSRSNHNYALPTERDRDRERDRDRERDRDRDRDRDRERDFRSGGTRQQRRGDYRDDREERREDRYDRNDRNERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQQLQQQQQQISPRRAPPPPENEKLSQREKLIRDIEQRRLECLVCVETIKAHHSTWSCQNCYHVIHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPTVSRNELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSQTMQCAMKEELKCGEICDKILNCGEHHCKEECHSGKCAACPEQVEQHCHCGKQDRQVQCTRESLDKRNYSCKESCGQPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPADQRSSCLDPIPVCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPLCKRPCSRQHPCEHPPQHNCHSAATCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGLSCGKPLSCGRHKCIKPCHEGPCQSSPSEICRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGNRKLSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKVNKSNKTLDCNDECRVLERNRRLAQALQSRNPDTQQKSLTKYSEFLRGFAKRNQALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQMVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00564333;
80% Identity: -