Dcog004113.1
Basic Information
- Insect
- Drosophila cognata
- Gene Symbol
- ct
- Assembly
- GCA_035041535.1
- Location
- JAWNLC010000235.1:3160472-3197663[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-26 9.3e-23 80.0 0.0 3 71 1129 1198 1127 1204 0.94 2 3 7.1e-32 6.3e-28 96.6 0.0 3 77 1611 1686 1609 1688 0.96 3 3 4.2e-31 3.8e-27 94.1 0.0 3 76 1903 1977 1901 1980 0.96
Sequence Information
- Coding Sequence
- atgaaaacaattttcaagctTAAGCAGCTCAACGGCAGTAACAGCAACGTGCCACAGATATTGCCGCAAACACGCGCTACACAAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacagcaacaggagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAACTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTGTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacagcagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACTAACAAtacgcaagcagcagcagttgcagcaactgcagcaacagcaggggTAACACAGCAGCAATCAGCACGGGATCTTGCTGaggcaacagcaagcagcaattgcaacgacgacgatgacgaggaCGATGACGAGGAGGATGCATCGATGCAATCAAATGTGGCGCATGCCGATGGTGATctagatgatgatgatatggAGTTGGAACCGGAGCATGTTGCTGATGGCGGCAGTGTTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGATGATGGTCATCAtcgtgatgatgatgatgaggatgttGCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaataacaacagcaacaatactGATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGACGACGATTGCACCAATAACAACACtaacaccaacaataataacaacaacaccaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaacaatcagcccGCTGTTCTATTAGCTGCCAAAGACAAAGAGGTAAGCAATCCATATTCATCGCTCACAAGCATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTCTTAATGCGGCTGcgacaaacaataacaacaacaacaacaatagcagcagcaacaacaacaacaacaacaatcacagtAGCCAGGgcagcgaaaacaacaacgagtTGAGCGCGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCacaatgacgatgatgacgatgatgatgataatgacaATGATAACGATAACCATGCTGAACTGCGCgatgccgatgatgatgaggaggacACGGATATGGctaacgagcagcagcacGCTGCAATTGCCAACAATCGGCACAGCGACGACAACGAAAAGGATGACGACGAGGAGCAGGATGCCGATATATCCaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGCCCACATTCGGCGATTGCCACAGCCGCCgcggccgcagcagccgctgcctgCGCTAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCACTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGAGGCAGCGAATGCCAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacagccgctAATCAAGTAACAGTAGAAGATGATggagatgaagatgaagaagaacaagaagcaGTAAAAGCACCAGCTACATCCAAGCCAGAAACAATCACAAATGTATCGGAAAAGCCTGAAAATGATGCATTGACCGAGGCCAAATTGCAGCCCAAAATCGAAATCTTAGACACAGACGATGCTGATGAGGGCGGCACTGAGATGGCCGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGCGGCGCGGCTTTGAAACATCAACcccagcagcaacgacaacagcagcagcagcagcagcagcagctgccacagcagcaacaacaactgggaGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaactgttgccaccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCTtcccaccaccaacaccagcagcatcagccacagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCGGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCAATGTGGCAgccgttgctgccgttgccgaggataacaacaacagcctgaCGCCAAATGCGAATGCGGCTGTGGCCGCTGCAGCAATGGCTGCCCATGCACAGCATGCGGCCGCTTTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCGGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGCCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAACCAGGCCCTCGACACTCTGCACATCTCGCGGCGCGTACGTGAACTGCTCTCCGTGCACAATATCGGGCAGCGGCTGTttgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTGAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCGGTCGCcgcacagcagcaggagcatcaGCGTCGCCATCTCGGCGACGATACCCACAGCAATGAGGATAGCAAATCGCCGCCGCAAAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCatctgcagccgcagcagcagcagcagctgcagcatgcCTCCGAGCATGCACAACGCGAACAGCGCGAAGCGGCCGCCGCCGTTGCTGCCgtacaccagcagcagcagcagcagcgggagcagcgCGAACAGCGCGAGGCCGCTCAGcgtgagcaacagcagcgcattCGTCACGACGATCTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCATTTCCCACGGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAAATAGccaagctgcaacagcagcaggcacagcagGCGCAGCAGGCTGCCAGTTTCCCCAACTTTTCCAGTTTGATGGCACTACAGCAGCAGGTGCTGAACGGTGCACAGGATCTATCGCTGGCCAGCAaggatattaaattaaatggacAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAGCGTGGCGACGATAACGACCGGAGCTATCCAACCCTGTCACATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCTCCCGCACCACCACTAACACAGACATCAGCGGGCAGCGGCAGTAATTCAAATGCAGCGAACTCAACGATTGCCAGTGGTCATGGCAGCAACTCGGCGGCACCCAGTCCGCTTAGCAATTCAATACTGCCGCCAGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTGACGCCGCATCATTCACAGCCGCAGCGGCCCACCAAGGCGGTGCTGCCACCCATCACTCAGCAACAGTTCGACATGTTCAACAATCTGAACACGGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTATTTGGCGAGTCCGTGTTGGGATTGTCGCAGGGCTCTGTTTCGGATTTGTTGGCTCGACCCAAGCCCTGGCACATGCTCACACAAAAAGGTCGCGAGCCGTTCATTCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAACTGGTCGCCAGTCAGTATAAAATTGCACCCGAGAAACTGATGCGCACGGGCAGTTACAGCGGCAGTCCCCAGATGCCCCAAGgattggccaacaaaatgcagGCGACGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAGCACATCATGCAACAGATGCAAGCAGCCGCCGCCATGTCGGcagcaatgcaacagcaacagcaggccgCTGCCGCTCAAGCTGCCGCCGTACAGCAGGCGCAGGCAcaggctcaggctcaggcgagccagcatcagcaggcgcagcatcagcagcaacagcatcagcaggtacatcagcatcagcaggcacaacagcaggcgcaggcgcaggcacaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACGTCGCCAGGGTTGCCGCCACAGCACGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCAGGTAATCCGACAGCAGCCGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCCCCAAATGCAATGCGCAGTCTGCATCAGCACATGTCACCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTCGGTCTATCACAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCAAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGTGATGCCAACAATGTGGAGCGTCTGCAGTTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGACGCAGCACTGGTCCCAACCAGcaggacaacagcagcgataCGTCCAGCAATGATACGAATGATTTCTACACGAGCAGCCCGGGACCGGGTTCTGTGGGTTCGTCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTAGCATTTGCCCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCTTAGCGACGCGTACCATCACTAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCACATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCatactgctgcagcagcgtctCGTCGAGTTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTcgcggctgctgctctgctcggTCGCAGCCTGGCCGGCATACCGggtgcggcggctgctgctggtgcagcagcagctgcggccgCTGCAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGCTTGGATTTATCTATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAACTGGACGCAAGTGGACACAACATGAGCGACAACGAGTCCATTGAGGGTGGCAGCCACGAGCCGGAGCACACACCCATAACCGAATATGAGAAGGCGCTGCAGAAATCGGCGCTCGCCTCGGCTGCGGCCGCTGCTGCATATCTGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGTGTCGCAGCGAACAACGCTGGCGtcgacatcagcagcagcagcgaacgcATCATCAATGGCGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGACGAGAGTGACAGCATCAAAGGTGGCGGCGACTCCAATGCCACCGATGCCGAGCACGACGATCACGCTCAACTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTACGCATCAAGCAGGAAGAGGACGACGAGGACGAAcagccccagcagcagcaaaagcagcaattaGAAGACACAACGCCTCTCGACAGCGATGCGGAGAAGCAGCTCAACGTGATCAATGAGGAGAAGTTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGTAATGGCGATGCCGACGAGCACTGCACTGCTGTACAGCAGGCGACGACAGCCGGAGCGGCAGCGGCGCCGGCAGCAACATCATGGAACTACTAA
- Protein Sequence
- MKTIFKLKQLNGSNSNVPQILPQTRATQAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTATGAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAVAATAATAGVTQQQSARDLAEATASSNCNDDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSVAAAKSLARTDSIGDANATHNVDDGHHRDDDDEDVADVATDEHEDDEEASLNISNNHNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNTNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEVSNPYSSLTSIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNSSSNNNNNNNHSSQGSENNNELSAVFKSTDLTSTHQHNDDDDDDDDNDNDNDNHAELRDADDDEEDTDMANEQQHAAIANNRHSDDNEKDDDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASEAANASSDEMPQQQAADAATAANQVTVEDDGDEDEEEQEAVKAPATSKPETITNVSEKPENDALTEAKLQPKIEILDTDDADEGGTEMAAGQTLEEQLVNSYWRRGFETSTPAATTTAAAAAAAAATAATTTGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQHFSAQQQQQYHQQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHLGDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHASEHAQREQREAAAAVAAVHQQQQQQREQREQREAAQREQQQRIRHDDLGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGAPANPFPTAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPTLSHAARKSEGGNTPAPPAPPLTQTSAGSGSNSNAANSTIASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGASTPTAAGVAANNAGVDISSSSERIINGVCVMQGSDYNRDESDSIKGGGDSNATDAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQPQQQQKQQLEDTTPLDSDAEKQLNVINEEKLRLVRVRRLSSNGDADEHCTAVQQATTAGAAAAPAATSWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00606855;
- 90% Identity
- iTF_00495007; iTF_00609667; iTF_00609776; iTF_00597256; iTF_00597146; iTF_00573834; iTF_00573945; iTF_00619628; iTF_00619737; iTF_00558446; iTF_00558556; iTF_00496381; iTF_00496493; iTF_00521245; iTF_00521137; iTF_00498049; iTF_00497939; iTF_00542338; iTF_00542228; iTF_00606855; iTF_00564552; iTF_00564441; iTF_00499376; iTF_00499485; iTF_00548592; iTF_00548702; iTF_00592880; iTF_00592992; iTF_00482129; iTF_00482019; iTF_00524913; iTF_00525024; iTF_00522066; iTF_00521955; iTF_00576242; iTF_00576133; iTF_00497171; iTF_00497281; iTF_00576852; iTF_00576962; iTF_00516887; iTF_00516781; iTF_00518231; iTF_00518342; iTF_00560023; iTF_00560153; iTF_00570296; iTF_00570186; iTF_00527833; iTF_00527945; iTF_00595738; iTF_00595850; iTF_00582748; iTF_00582861; iTF_00513247; iTF_00513356; iTF_00485760; iTF_00485648; iTF_00616096; iTF_00615987;
- 80% Identity
- iTF_00495007;