Basic Information

Insect: Drosophila heteroneura
Gene Symbol: ct
Assembly: GCA_035042245.1
Location: JAWNLO010001294.1:423010-460520[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-26 8.7e-23 80.0 0.0 3 71 1153 1222 1151 1228 0.94

2 3 7.2e-32 5.9e-28 96.6 0.0 3 77 1634 1709 1632 1711 0.96

3 3 4.3e-31 3.5e-27 94.1 0.0 3 76 1926 2000 1924 2003 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-26	8.7e-23	80.0	3	71	1153	1222	1151	1228	0.94
2	3	7.2e-32	5.9e-28	96.6	3	77	1634	1709	1632	1711	0.96
3	3	4.3e-31	3.5e-27	94.1	3	76	1926	2000	1924	2003	0.96

Sequence Information

Coding Sequence: atgaaaacaattttcaagctTAAGCAGCTCAACTACAGTAACAGCAACGTGCCACAGACATTGCCGCAAACACGCGCTACACTTGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacaggaacagcagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGTGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAgccaacacaaatacaccGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCGAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacaacagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACTAACAATacgcaagcagcagcagctgcagcaactgcaacaacagcaggggTAGCACAGCAGCAATCAGTGCGCGATCTTGCTGAGGCAACAGCAAGTAGCAATTGCATCGACGACGATGGCGAGGACGATGACGAGGAGGATGCTTCGATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGATATGGAGTTGGAACCGGAGCATGTTGCTGATGGCGGTAGTGTTGCTGCCACTAAGTCATTGGCAAGAACTGATAGCATCGGCGATGCGAATGCAACACATAATGTTGTTGATGGTCATCAtcgtgatgatgatgatgacgatgctgCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaacaataataacagcaacaatactGATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATTGCGCTGAGGACGACGATTGCACCAATAACAATACTaacaccaacaataataacaacaacaccaacaccaacaccaacaccaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaataacaacaacaacaataatcaacCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGGTAAGCAATCCATATTCATCGCTGACAAGCATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTGTTAATGCGGCTGcgacaaacaataacaacaacaacaacaatagcagcagcaacaacaacaacaacaacaacaataatcacaGTAGCCAGGgcagcgaaaacaacaacgagctGAGCGCGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATgaagacgatgatgatgataatgataatgataatgataatgataatgagaATGATaacgataatgataatgatactGATAACCATGCTGAGCTGCGCgatgtcgatgatgatgaggaggacACGGATATGGCTAACGAGCAGCATCATTCTGCCATTGGCAACAATCGGCACAACGATGATAACGAAAAGGATGATGACGAGGAACAGGATGCCGATATATCcaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATGCGGCTATTGCCACAGCCGCCGCggccgcagcagccgctgcctGCGCCAACGATCCGAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCTTTGGCAGCCGAAGCTCTCAAGAATGGCGCCAGCGATACAGCGAATGCTAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacAACCGCTAATCAAGTAACAGTAGAAGATGATggagatgatgatgaagatgaagatgaagaacaagaacaagaagcagtaagagcagcagcagaaacaatcGCAAATGTAACGGCAAAGCCTGAAAATGATACATTGACCGAGGCCAACTTGCAGCCCAAAATCGAAATCATAGACACAGACGATGCTGATGGGGGCGGCACTGAGATTGCCGCTGGCCAAACACTAGAAGAACAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTgaaacatcaacagcagcagcaacgacaacagcagcagcagcagcagcagcagcaaccactgGGAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaactgttgccgccaccgccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagcatcagccacagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGTAACCGGCAGCGATCCACTgaatcaacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACATCATCTGCATCACGGTGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCACCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCaatgtggcagctgttgctgccgtttccgaggataacaacaacagcctgACGCCAAATGCGAATGCGGCTGTGGCCGCTGCAGCAATGGCTGCCCATGCCCAGCATGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAACTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCGGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTACGCTACAATATGGACAAGTATGCGAATCAGGCGCTCGACACTCTTCACATCTCGCGACGCGTACGTGAACTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTTtgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAATCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGACTTGCACACATACTCAGCGAGGCATCGTCCCTGATGAAGAGCAGCGCGGTCGCcgcacagcagcaggagcatcAGCGTCGCCATGTCGTCGACGATACGCACAGCAATGAAGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcaacagctgcagcatgcCACCGAGCATGCACAACGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCcgtgcaccagcagcagcagcagcgggagcaGCGCGAACAGCGCGAGGCCGCACAGcgtgagcaacagcagcgcattCGTCACGACGAGCTGGGACCGGATAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCGCGCGAGGCAGCCTTTCCCAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAACCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAAATAGccaagctgcaacagcagcaggcacagcagGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGTTTGATGGCACTACAGCAACAGGTGCTGAACGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATTAAGTTAAATGGACAGCGCTCATCGCTCGATCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGACGATAACGACAGAAGCTATCCATCCCTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCGCCAGCACCATCACTAACACAGACATCAGCGGGCAGCGGCAGTAATTCAAATGCAGCCAACTCAACGATTGCCAGCGGTCACGGAAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAATCAGAGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTAACGCCGCATCATTCACAGCCGCAGCGGCCCACCAAGGCGGTCCTGCCACCCATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGATATTGTGAGGCGTGTGAAGGAGGCCCTCTCCCAGTACAGCATCTCGCAGCGTCTATTCGGTGAGTCTGTGCTGGGATTGTCGCAGGGTTCCGTGTCGGATTTGTTGGCTCGACCCAAGCCTTGGCATATGCTCACACAAAAGGGTCGCGAGCCGTTCATCCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAACTGGTCGCCAGCCAGTATAAAATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAAGGATTGGccaataaaatgcaagcaacGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCGGCagcaatgcaacagcaacagcaggccGCTGCCGCTCAAGCTGCCGCCGTACAGCAGGCGCAGGCACAGGCTCAAGCTCAGGCGAGCCAGCATCAGCAGgcgcagcaccaacagcaacagcaccaacaggtccatcagcatcagcaggcaCAACAGCAGGCGCAGGcgcaggcacaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACCTCGCCCGGTTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCTAGTGGCATCCAGTCGGTTGCAGGTAATCCAACGGCAGTGGGCAGCACTCCGGGTAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGTACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCACCCACGGTTTATGAGATGGCCGCACTCACCCAGGATCTGGACACGCACGATATAACGACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGTCTATCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCAAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGGATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCgtctgcagctgctgaagAACGAGCGACGGGAGGCGAGCAAGCGACGACGCAGCACTGGACCCAACCAGCaggacaacagcagcgataCGTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGCTCTGTGGGCTCATCTGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTCCGTCTGGCATTTGCACTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtcTCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTcgcggctgctgctctgctcggTCGCAGCCTGGCCGGCATACCGGgcgcggcggctgctgctggcgctgcggcagctgcggctgctgcagtggGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCAAGCGGACACAATATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCATACACCCATATCCGAATACGAGAAGGCGCTGCAGAAATCGGCGCTCGCCTCGGCTGCGGCCGCTGCTGCATATATGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCCGGTGTCGCAGCGAGCAACGCTGGCATCGACATCAgcggcaccagcagcagcagcgagcgcATCATCAACGGTGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGTGACAGCATCAAAGGTGGCGGCGGCGATTCCAATGCTGCCGATGCCGAGCACGATGATCACGCCCAGCTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAAgaggacgacgaggacgaacaaccccagcagcagcaaaagcagcagttaGAAGACGCAACGCCTCTCGACAGCGATGCGGAGAAGCAGCTCAGCGTGATCAATGAGGAGAAGTTGCGTTTGGTGCGCGTCCGGCGCCTCAGCAGCAATGGCGATGCCGACGAGCTCTGCACTGCTGCACAGCAGGCGACGACAGCCGGAGCGGCAGTGTCGCCGGCGGCAACATCATGGAACTACTAA
Protein Sequence: MKTIFKLKQLNYSNSNVPQTLPQTRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTGTAAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAAAATATTAGVAQQQSVRDLAEATASSNCIDDDGEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSVAATKSLARTDSIGDANATHNVVDGHHRDDDDDDAADVATDEHEDDEEASLNISNNHNNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHCAEDDDCTNNNTNTNNNNNNTNTNTNTNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEVSNPYSSLTSIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNSSSNNNNNNNNNHSSQGSENNNELSAVFKSTDLTSTHQHNDDEDDDDDNDNDNDNDNENDNDNDNDTDNHAELRDVDDDEEDTDMANEQHHSAIGNNRHNDDNEKDDDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHAAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDTANASSDEMPQQQAADAATTANQVTVEDDGDDDEDEDEEQEQEAVRAAAETIANVTAKPENDTLTEANLQPKIEIIDTDDADGGGTEIAAGQTLEEQLVNSYWRRGFETSTAAATTTAAAAAAAATTGSKTPTIYQNANVVQQQLLPPPPPPPPLPPSQQQQQQQQHFSAQQQQQYHQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQHQPQQQQLLQQQQHHHNSSNSSNSSSVTGSDPLNQHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAATIASTLNGNKSLLQAAAAANVAAVAAVSEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGATANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGNTPAPPAPSLTQTSAGSGSNSNAANSTIASGHGSNSAAPSPLSNSILPPALSNQSEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSVAGNPTAVGSTPGSNEKKPMMMPVLGGVHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPISEYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGVAASNAGIDISGTSSSSERIINGVCVMQGSDYNRDESDSIKGGGGDSNAADAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQPQQQQKQQLEDATPLDSDAEKQLSVINEEKLRLVRVRRLSSNGDADELCTAAQQATTAGAAVSPAATSWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00543530;
90% Identity: iTF_00494897;
80% Identity: iTF_00518342;