Basic Information

Insect: Drosophila tanythrix
Gene Symbol: ct
Assembly: GCA_035043275.1
Location: JAWNNC010000508.1:8553936-8589850[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.2e-27 8.1e-23 80.4 0.0 3 71 1122 1191 1120 1197 0.94

2 4 5.6e-32 5.5e-28 96.9 0.0 3 77 1573 1648 1571 1650 0.96

3 4 6.2e-09 6.1e-05 23.1 0.1 3 35 1838 1870 1836 1870 0.95

4 4 9.5e-06 0.094 12.9 0.0 56 76 1869 1889 1868 1892 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.2e-27	8.1e-23	80.4	0.0	3	71	1122	1191	1120	1197	0.94
2	4	5.6e-32	5.5e-28	96.9	0.0	3	77	1573	1648	1571	1650	0.96
3	4	6.2e-09	6.1e-05	23.1	0.1	3	35	1838	1870	1836	1870	0.95
4	4	9.5e-06	0.094	12.9	0.0	56	76	1869	1889	1868	1892	0.89

Sequence Information

Coding Sequence: atgaaaacaattttcaagctTAAGCAGCTCAACGGCAGTAACAGCAACGTGCCACAGATATTGCCGCAAACACGCGCTACACAAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacagcaacaggagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAACTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTGTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacagcagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACTAACAATacgcaagcagcagcagttgaggcaactgcagcaacagcaggggcaacacagcagcaatcAGCACGGGATCTTGCTGAggcaacagcaagcagcaattgcaacgacgacgatgacgaggaCGATGACGAGGAGGATGCATCGATGCAATCAAATGTGGCGCATGCCGATGGTGATctagatgatgatgatatggAGTTGGAACCGGAGCATGTTGCTGATGGCGGCAGTGTTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGATGATGGTCATCAtcgtgatgatgatgatgaggatgttGCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaataacaacagcaacaatactGATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgAAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGACGACGATTGCACCAATAACAACACTaacaccaacaataataacaacaacaccaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaacaatcagcccGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTCTTAATGCGGCTGcgacaaacaataacaacaacaacaacaatagcagcagcaacaacaacaacaacaatcacagtAGCCAGGgcagcgaaaacaacaacgagtTGAGCGCGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCacaatgacgatgatgacgatgatgatgataatgacaatgataatgataacCATGCTGAACTGCGCGatgccgatgatgatgaggaggacACGGATATGgctaacgagcagcagcacGCTGCAATTGCCAACAATCGGCACAGCGACGACAACGAAAAGGATGACGACGAGGAGCAGGATGCCGATATATCCaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGCCCACATTCGGCGATTGCCACAGCCGCCGCggccgcagcagccgctgcctGCGCCAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCACTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGAGGCAGCGAATGCCAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacagccgctAATCAAGTAACAGTAGAAGATGATggagatgaagatgaagatgaagaacAAGAAGCAGTAAAAGCACCAGCTACATCCAAGTCAGAAACAATCACAAATGTATCGGAAAAGCCTGAAAATGATGCATTGACCGAGGCCAAATTGCAGCCCAAAATCGAAATCATAGACACAGACGATGCTGATGAGGGCGGCACTGAGATGGCCGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGCGGCGCGGCTTTGAAACATCAACcccagcagcaacgacaacagcagcagcagcagcagcagcagcagctgctgcaacagcagcagcagcaacaactgggAGCAAAACGCCAACAATTTATCAAAATGCCAATgtggtgcagcagcaactgttgccaccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCTtcccaccaccaacaccagcagcatcagccacagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCGGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCAATGTGGCAgccgttgctgccgttgccgaggataacaacaacagcctgaCGCCAAATGCGAATGCGGCTGTGGCCGCTGCAGCAATGGCTGCCCATGCACAGCATGCGGCCGCTTTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCGGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGCCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAATATGGACAAGTACGCGAACCAGGCCCTCGACACTCTGCACATCTCGCGGCGCGTACGTGAACTGCTCTCCGTGCACAATATCGGGCAGCGGCTGTTtgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTGAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCGGTCGCCGcacagcaacaggagcatCAGCGTCGCCATCTCGGCGACGATACCCACAGCAATGAGGATAGCAAATCGCCGCCGCAAAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcagcagctgcagcatgcCTCCGAGCATGCACAACGCGAACAGCGCGAAGCGGCCGCCGCCGTTGCTGCcgtacaccagcagcagcagcagcagcgggagcagCGCGAACAGCGTGAGGCCGCTCAGCgtgagcaacagcagcgcattCGTCACGACGATCTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCATTTCCCACGGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAAATAGccaagctgcaacagcagcaggcacagcaGGCGCAGCAGGCTGCCAGTTTCCCCAACTTTTCCAGTTTGATGGCACTACAGCAGCAGGTGCTGAACGGTGCACAGGATCTATCGCTGGCCAGCAAggatattaaattaaatggacAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAGCGTGGCGACGATAACGACCGGAGCTATCCAACCCTGTCACATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCTCCCGCACCACCACTAACACAGACATCAGCGGGCAGCGGCACGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTGACGCCGCATCATTCACAGCCGCAGCGGCCCACCAAGGCGGTGCTGCCACCCATCACTCAGCAACAGTTCGACATGTTCAACAATCTGAACACGGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTATCCCAGTACAGCATCTCGCAGCGTCTATTTGGTGAGTCTGTGTTGGGATTGTCGCAGGGCTCTGTTTCGGATTTGTTGGCTCGACCCAAGCCCTGGCACATGCTCACACAAAAAGGTCGCGAGCCGTTCATTCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAACTGGTCGCCAGTCAGTATAAAATTGCGCCTGAGAAACTGATGCGCACGGGCAGTTACAGCGGCAGTCCCCAGATGCCCCAAGGattggccaacaaaatgcaaGCGACGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCCATGTCGGCagcaatgcaacagcaacagcaggccgCTGCCGCTCAAGCTGCCGCCGTACAGCAGGCGCAGGCAcaggctcaggctcaggcgagccagcatcagcaggcgcagcatcagcagcaacagcatcagcagAATATGCTGCTGACCTCGCCAGGGTTGCCGCCACAGCACGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCAGGTAATCCGACAGCAGCCGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCCCCAAATGCAATGCGCAGTCTGCATCAGCACATGTCACCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTCGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGTGATGCCAACAATGTGGAGCGTCTGCGGCTGCATGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGACGCAGCACTGGACCCAACCAGCaggacaacagcagcgatgTCCAGCAATGATACGAATGATTTCTACACGAGCAGCCCGGGACCGGGTCTGTGGTTCGTCCGGTGGGCGGTGCACCGCCCAGCAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAGAGGCACTGCGTTTGCATTTGCCCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCAGCGACGCGTACCATCACTAA
Protein Sequence: MKTIFKLKQLNGSNSNVPQILPQTRATQAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTATGAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAVEATAATAGATQQQSARDLAEATASSNCNDDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSVAAAKSLARTDSIGDANATHNVDDGHHRDDDDEDVADVATDEHEDDEEASLNISNNHNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNTNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNSSSNNNNNNHSSQGSENNNELSAVFKSTDLTSTHQHNDDDDDDDDNDNDNDNHAELRDADDDEEDTDMANEQQHAAIANNRHSDDNEKDDDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASEAANASSDEMPQQQAADAATAANQVTVEDDGDEDEDEEQEAVKAPATSKSETITNVSEKPENDALTEAKLQPKIEIIDTDDADEGGTEMAAGQTLEEQLVNSYWRRGFETSTPAATTTAAAAAAAAAAATAAAATTGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQHFSAQQQQQYHQQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHLGDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHASEHAQREQREAAAAVAAVHQQQQQQREQREQREAAQREQQQRIRHDDLGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGAPANPFPTAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPTLSHAARKSEGGNTPAPPAPPLTQTSAGSGTLSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGREPFIRMQLWLSDANNVERLRLHEERAAGGEQATTQHWTQPAGQQQRCPAMIRMISTRAARDRVCGSSGGRCTAQQKQRVLFSEEQRGTAFAFALDPYPNVGTIEFLANELSSDAYHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00482019; iTF_00482129; iTF_00609667; iTF_00609776; iTF_00592880; iTF_00592992; iTF_00573945; iTF_00573834; iTF_00558556; iTF_00558446; iTF_00495007; iTF_00494897;
90% Identity: iTF_00494897;
80% Identity: -