Dneu012476.1
Basic Information
- Insect
- Drosophila neutralis
- Gene Symbol
- ct
- Assembly
- GCA_035044385.1
- Location
- JAWNME010000527.1:488955-531416[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-26 1e-22 80.0 0.0 3 71 1111 1180 1109 1186 0.94 2 3 1.1e-31 6.8e-28 96.6 0.0 3 77 1593 1668 1591 1670 0.96 3 3 6.3e-31 4.1e-27 94.1 0.0 3 76 1885 1959 1883 1962 0.96
Sequence Information
- Coding Sequence
- ATGTACGATTGGTCAGCGGGTGAGGCAGATACGTGCATGTCCAGCTACAAAAAGCGCGCTACACTAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacagcaacaggagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacagcagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACTAATAAtacgcaagcagcagcagctgcagcaactgctgcaacagcagggGTAACACAGCAGCAATCAGCACGGGATCTTGCTGAggcaacagcaagcagcaattgcaacgacgacgatgacgaggacGATGACGAGGAAGATGCATCAATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGATATGGAGTTGGAACCGGAGCATGTTGCTGATAGCGGCAGTGTTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGATGATGGTCATCAtcgtgatgatgatgatgaggatgttGCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaataacaacagcaacaatactgATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGACGACGATTGCACCAATAACAACACTaacaccaacaataataacaacaacaccaacaccaacagcaacagcaatgagaAGCGCAGAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaataatcagcCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTCTTAATGCGGCTGcgacaaacaataacaataacaacaacaatagcagcagcaacaacaacaacaatcacagtAGCCAGGgcagcgaaaacaacaacgagtTGAGCGCGGTGTTTAAATCGACAGATCTAACATCTACCCATCAGCacaatgacgatgatgacgatgatgatgataatgacaatgataatgataaccATGCTGAACTGCGCgatgccgatgatgatgaggaggacACGGATACGgctaacgagcagcagcacGCTGCTATTGCCAACAATCGGCACAACGACGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATATATCCaatgccacagccacagcggACAGCAATGAGCTGCAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGCCCACATTCGGCTATTGCCACAGCCGCCgcggccgcagcagccgctgcctgCGCTAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCACTGGCCGCAGAGGCACTCAAGAATGGCGCCAGCGAGGCAGCGAATGCAAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacaACCGCAAATCAAGTAACAGTAGAAGATGATggagatgaagatgaagatgaagaacAAGAAGCAGTAAAAGCACCAGCTAAATCCAAGTCAGAAACAATCACAAATGTATCGGAAAAGCCTGAAAATGATACATTGACCGAGGCCAAATTGCAGCCTAAAATCGAAATCATAGACACAGACGATGCTGATGAGGGCGGCACTGAGATGGCCGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTGAAACATCAACACcggcagcaacgacaacagcagcagcagcagcagcagcagcagctgcaacagcagcagcaacaactgggAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaattgttgccaccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagccacagcagcaacagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCGGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCAATGTGGCAGccgttgctgccgttgccgaggataacaacaacagcctgacgccaaatgcgaatgcggctgttgccgctgcagcaATGGCTGCCCATGCACAGCATGCGGCCGCTTTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCAGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCTGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAATATGGACAAGTATGCGAACCAGGCCCTCGACACTCTTCACATCTCGCGGCGCGTACGTGAACTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTTTGCCAAATATATTCTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGCCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAATCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTGAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCGGTCGCcgcacagcagcaggagcatcAGCGTCGCCATATCGGCGACGATACGCACAGCAATGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCatctgcagccgcagcagcagcagcagttgcagcatgCCTCCGAGCATGCACAACGCGAACAGCGCGAAGCGGCCGCCGCCGTTGCTGCcgtacaccagcagcagcagcagcagcgggagcagcGCGAACAGCGCGAGGCCGCTCAGcgtgagcaacagcagcgcattCGTCACGACGATCTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCATTTCCCACTGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAGATAGccaagctgcaacagcagcaggcacagcaGGCGCAGCAGGCTGCCAGTTTCCCCAACTTTTCCAGTTTGATGGCACTACAGCAGCAGGTGCTGAACGGTGCGCAGGATCTATCGCTGGCCAGCAAGGATATTAAGTTAAATGGACAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgttccaAGGATGGCGAACGTGGCGACGATAACGACCGGAGCTATCCAGCCCTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAACACACCTGCACCGCCCGCACCACCACTAACACAGACATCAGCGGGCAGTGGCAGTAATTCAAATGCTGCCAACTCAACGGTTGCCAGCGGTCATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAATTCAATACTGCCGCCAGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTAATTACACAGCCGCCCGTGACGCCGCATCATTCACAGCCGCAGCGGCCCACCAAGGCGGTGCTGCCACCCATCACTCAGCAACAGTTCGACATGTTCAACAATCTGAACACGGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTATAGCATCTCACAGCGTCTATTTGGTGAGTCTGTGTTGGGATTGTCGCAGGGATCAGTTTCGGATTTGTTGGCTCGACCCAAACCCTGGCACATGCTCACACAAAAAGGTCGCGAGCCATTCATTCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAACTGGTCGCCAGTCAGTATAAAATTGCGCCTGAGAAACTGATGCGCACGGGCAGTTACAGCGGTAGTCCCCAGATGCCCCAAGgcttggccaacaaaatgcaagCGACGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAGCACATCATGCAACAGATGCAAGCAGCCGCCGCCATGTCGGCagcaatgcaacagcaacagcaggccgCTGCCGCTCAAGCTGCCGCCGTACAGCAAGCGCAGGCACAGGCTCAGGCTCAGGCGAGCCAGCATCAGCAGgcgcagcatcagcagcaacagcatcagcaggtacatcagcatcagcaggcaCAACAGCAGGCGGCGGcgcaggcacaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACCTCGCCAGGGTTGCCGCCACAGCACGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCAGGTAATCCGACTGCACCCGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCCCCAAATGCAATGCGCAGTCTGCATCAGCATATGTCACCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTCGGTCTATCACAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCAAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGTGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGACGCAGCACTGGACCGAACCAGCaggacaacagcagcgatACGTCCAGCAATGATACGAATGATTTCTACACGAGCAGCCCGGGACCGGGTTCTGTGGGTTCGTCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTAGCATTTGCCCTGGATCCGTATCCGAATGTCGGCACTATTGAGTTTCTGGCCAACGAGCTAAGCTTAGCGACGCGTACCATCACTAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCACATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCatactgctgcagcagcgtctCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTcgcggctgctgctttgctCGGTCGCAGCCTGGCCGGCATACCGggtgcagcggctgctgctggtgcagcggcagctgcggcCGCTGCAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGTTTGGATTTATCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGACGAGCTCGAACTGGACGCAAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCACACACCCATAACCGAATATGAAAAGGCGCTGCAGAAATCGGCTCTCGCCTCGGCTGCGGCCGCTGCTGCATATCTGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGTGTCGCAGCGAACAACGCTGGCGtcgacatcagcagcagcagcagcgagcggATCATCAATGGCGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGTGACAGCATCAAAGGTGGCGGCGACTCCAATGCCACCGATGCCGAGCACGACGATCACGCTCAACTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAAGAGGACGACGAGGACGAAcagccccagcagcagcaaaagcagcaattAGAAGATACAACGCCTCTCGACAGCGATGCGGAGAAGCAGCTCAACGTGATCAATGAGGAGAAGTTGCGGTTGGTGCGCGTGCGTCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCACTGCTGCACAGCAGGCGACTACAGCCGGAGCGGCAGCGGCGCCGGCAGCAACATCATGGAACTACTAA
- Protein Sequence
- MYDWSAGEADTCMSSYKKRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTATGAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAAAATAATAGVTQQQSARDLAEATASSNCNDDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADSGSVAAAKSLARTDSIGDANATHNVDDGHHRDDDDEDVADVATDEHEDDEEASLNISNNHNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNTNTNSNSNEKRRKRNASNNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNSSSNNNNNHSSQGSENNNELSAVFKSTDLTSTHQHNDDDDDDDDNDNDNDNHAELRDADDDEEDTDTANEQQHAAIANNRHNDDNEKDEDEEQDADISNATATADSNELQIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASEAANASSDEMPQQQAADAATTANQVTVEDDGDEDEDEEQEAVKAPAKSKSETITNVSEKPENDTLTEAKLQPKIEIIDTDDADEGGTEMAAGQTLEEQLVNSYWRRGFETSTPAATTTAAAAAAAAAATAAATTGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQHFSAQQQQQYHQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHIGDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHASEHAQREQREAAAAVAAVHQQQQQQREQREQREAAQREQQQRIRHDDLGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGAPANPFPTAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPALSHAARKSEGGNTPAPPAPPLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAAAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAPGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGASTPTAAGVAANNAGVDISSSSSERIINGVCVMQGSDYNRDESDSIKGGGDSNATDAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQPQQQQKQQLEDTTPLDSDAEKQLNVINEEKLRLVRVRRLSSNGDADEHCTAAQQATTAGAAAAPAATSWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00606855;
- 90% Identity
- iTF_00494897;
- 80% Identity
- iTF_00558556;