Basic Information

Insect: Drosophila hawaiiensis
Gene Symbol: ct
Assembly: GCA_037043685.1
Location: JBAMBA010000107.1:4932886-4970308[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.7e-26 9.5e-23 80.0 0.0 3 71 1254 1323 1252 1329 0.94

2 3 1.1e-31 6.4e-28 96.5 0.0 3 77 1737 1812 1735 1814 0.96

3 3 6.7e-31 3.8e-27 94.0 0.0 3 76 2025 2099 2023 2102 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.7e-26	9.5e-23	80.0	3	71	1254	1323	1252	1329	0.94
2	3	1.1e-31	6.4e-28	96.5	3	77	1737	1812	1735	1814	0.96
3	3	6.7e-31	3.8e-27	94.0	3	76	2025	2099	2023	2102	0.96

Sequence Information

Coding Sequence: atgaaaacaattttcaagctTAAGCAGctcaacaacagtaacagcaacgtGCCACAGACATTGCCGCAAACACGCGCTACACTAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacaacaacagcagcagcggcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAgccaacacaaatacaccGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAAgcggcagcggctgcggctgcggcggcagcagctgcagcggcagcacaacaacagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACAAACAAtacgcaagcagcagcagcagctgcagcaactgcaacaacagcaggcgtAACACAGCAGCAATCAGCACGCGATCTTGCTGAGGCAACAGCAAGTAGCAATTGCATCGACGACGATGGCGAGGACGATGACGAGGAGGATGCTTCGATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGATATGGAGTTGGAGCCGGAGCATGTTGCTGATGGCGGTAGTATTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGATGATGGTCATCATcgtggtgatgatgatgatgacgatgttGCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGCTTAAATATTGGCaataatcacaacaacaacaataataacagcaacaatactGATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATTGCGCTGAGGACGACGATTGCACCAATAACAATactaacaccaacaacaacaacaacaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaataatcagcCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGACAAATCGTCCCGCATTGGGTCTGCCCACTGACTTTGACTTGGACATGGACTTGAACTTCCCCTACCTCTGCCCGTTGACCAGCATAATGCGTACCgaatatgcatGTAAGCAATCCATATTCATCGCTCACAAGCAAAATGCCAACAAGCTGGCCCGTCCGttgcacaaacaaaagcagagcaaGCCACAATGTGAGGCAGGCAGCGGTGCCAAGCTCGCGTCCTGGTTAAGCCTCAAGCCACAGCATGCCACTGCCCGCCCGCCCGCCCATTACGCCCTTAAGTCCTACATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGCCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTGTTAATGCGGCTGcgacaaacaataacaacaacaacaacaacaacaatagcagcagcaacaacaacaacaagaacaacaacaataatcacaGCAGCCAGGCcagcgaaaacaacaacgagtTGAGCGCAGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATgaagacgatgatgatgataatgataatgataatgataatgataacgataatgataatgataaccATGCTGAGCTGCGcgatgatggcgatgatgatgaggaggacACGGATACGgccaacgagcagcagcatgcTGCCATTGGCAACAATCGGCACAACGATGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATCTATCcaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATTCGGCGATTGCCACAGCTGCCgcggccgcagcagccgctgcgTGCGCCAACGATCCGAACAAATTCCAAGCTTTGCTCCTGGAACGCACCAAAGCGCTGGCCGCCGAGGCTCTGAAGAATGGCGCCAGCGAGACAGCGAATGCAAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacagccgctAATCAAGTAACAGTAGAAGATGAGGCAGATGAAGATGCAGATGAAGATgcagatgaagatgaagcacaagaagcagcaagagcagcagccacatccCAATCCAAATCAGAAACAATCACAAATGCAACGGAAAAGCCTGAAAATGATGCATTGACCGAGGCCAACTTGCAGCCCAAAATCGAAATCATTGACACAGACGATGCTGATGGGGGGGCCGGCACTGAGATTGCCGCTGGGCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTGAAACATcaacagtagcagtagcagcagcagcagcagcagcagcagcagcaacgacaacagcagcagcagcagccactgggAGCAAAACGCcaacaatttatcaaaatgccaatgtggtgcagcagcaactgttgccgccaccgccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcagcagcacttttctgcacagcaacaacaacaacaacaacaatatcaccaacagcaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagccacagcagcagcagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgcACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACATCATCTGCATCACGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCAGCGGCCGCTGCCaatgtggcagctgttgctgccgttgccgaagataacaacaacagcctgACGCCAAATGCGAATGCGGCTGTCGCCGCTGCAGCAATGGCTGCCCATGCACAGCACGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGcggccgccgctgccgctggcCAGGATCCGCGAGCACAACATTTTCGCTTCGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTCGACACACTTCACATCTCGCGACGCGTACGGGAACTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTttgccaaatatattttgggaCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTCAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCTGCCGCcgcacagcagcaggagcatcAGCGTCGCCATGTCGTCGACGATACGCACAGCAACGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcaacaactgcagcatgCCACCGAGCATGCACAGCGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCCGtacaccaccagcagcagcagcagcagcgggagcaGCGCGAACAGCGCGAGGCCGCTCAgcgtgagcagcagcagcggattCGTCACGACGAACTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACGCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAACCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGTCATGTGCTCGAACGTGAGATAGccaagctgcaacagcagcaggcacagcagGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGCTTGAtggcactgcagcagcaggtgctgaACGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATCAAGTTAAATGGACAGCGCTCATCACTCGATCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGACGATAACGACAGAAGCTATCCATCGCTGTCGCACGCGGCTCGCAAATCGGAGGGTGGCAACACACCAGCACCGCCCGCACCATCACTAACACAGACATCGgcgggcagcggcagcaattcAAATGCAGCCAACTCAACGGTTGCCAGCGGTCATGGCAGCAACTCAGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCACTGATTACACAGCCGCCTGTGACGCCGCATCATTCGCAGCCGCAGCGGCCAACGAAGGCGGTGCTGCCACCGATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTATTCGGTGAGTCTGTGTTGGGATTGTCGCAGGGTTCCGTTTCGGATTTGTTGGCACGACCCAAGCCTTGGCATATGCTGACACAAAAGGGTCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAACTGGTCGCCAGCCAGTATAAGATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGTGGCAGCCCCCAGATGCCCCAAGGATTGGCCAATAAAATGCAGGCGACGCTGCCCATGCAAAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCAGCagcaatgcaacagcaacagcaggcagctgccGCTCAAGCTGCCGCCGTACAACAGGCGCAGGCACAGGCTCAAGCTCAGGCCAGCCAGCACCAGCAGgcgcagcatcaacagcaacagcatcaacaggtgcatcagcatcagcaggccCAACAGCAGGcgcaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACGTCGCCCGGTTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCAAGTGGCATCCAATCGGGTGCAGGCAATCCAACGGCAGCGGGCAGCACTCCGGGCAGCAACGAAAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCGCCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCTCTGCTCGCCAACAATATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGTCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGcgtctgcagctgctgaagaACGAGCGACGGGAGGCGAGCAAGCGACGACGCAGCACTGGCCCCAACCAGcaggacaacagcagcgataCGTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGCTCTGTCGGTTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCGCTGCGTTTGGCATTTGCGCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtctCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGtatttcgctgctgctgcactgctcGGTCGCAGCCTGGCCGGCATACCGggtgcggcggctgctgccggtgcagcggcagctgcggcTGCCGCAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAGGCATTCAAGGAACAGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCATACACCCATCACCGAATACGAGAAGGCGCTGCAGAAATCGGCGCTCGCttcggctgcggctgctgctgcatatatGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCGCAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGTGTCGTCGCGAGCAACGCTGGCGTCgacatcggcagcagcagcagcagcgagcggaTCATCAACGGTGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGCGACAGCATCAAAGGTGGCGGCGGCGACTCCAATGCTGCCGATGCCGAGCACGACGATCACGCCCAGCTGGAGATTGAGCAGCGTTTCATGGAGCCAGAGGTGCGCATCAAGCAGGAAGAGGACGACGAGGACGAAcaagcccagcagcagcaaaagcagcagttaGACGATGCCACGCCTCTCGACAGCGATGCGGTGAAGCAGCTCAACGTGATCAATGAGGAGAAGTTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCGCTGCTGCACAGCAGGCGACGACAGCCGGTGCGGCAGCGTCGCCGGCAGCAACATCATGGAACTACTAA
Protein Sequence: MKTIFKLKQLNNSNSNVPQTLPQTRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTTTAAAAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAAAAATATTAGVTQQQSARDLAEATASSNCIDDDGEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSIAAAKSLARTDSIGDANATHNVDDGHHRGDDDDDDVADVATDEHEDDEEASLNIGNNHNNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHCAEDDDCTNNNTNTNNNNNNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKETNRPALGLPTDFDLDMDLNFPYLCPLTSIMRTEYACKQSIFIAHKQNANKLARPLHKQKQSKPQCEAGSGAKLASWLSLKPQHATARPPAHYALKSYIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNNSSSNNNNKNNNNNHSSQASENNNELSAVFKSTDLTSTHQHNDDEDDDDDNDNDNDNDNDNDNDNHAELRDDGDDDEEDTDTANEQQHAAIGNNRHNDDNEKDEDEEQDADLSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASETANASSDEMPQQQAADAATAANQVTVEDEADEDADEDADEDEAQEAARAAATSQSKSETITNATEKPENDALTEANLQPKIEIIDTDDADGGAGTEIAAGQTLEEQLVNSYWRRGFETSTVAVAAAAAAAAAATTTAAAAATGSKTPTIYQNANVVQQQLLPPPPPPPLPPSQQQQQQQQQHFSAQQQQQQQQYHQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAAAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHHQQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGATANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGNTPAPPAPSLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSGAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGVVASNAGVDIGSSSSSERIINGVCVMQGSDYNRDESDSIKGGGGDSNAADAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQAQQQQKQQLDDATPLDSDAVKQLNVINEEKLRLVRVRRLSSNGDADEHCAAAQQATTAGAAASPAATSWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495757;
90% Identity: iTF_00494897;
80% Identity: iTF_00516887;