Basic Information

Insect: Drosophila silvestris
Gene Symbol: ct
Assembly: GCA_035043445.1
Location: JAWNMZ010000164.1:726799-761227[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 9.3e-27 8.1e-23 80.2 0.0 3 71 1140 1209 1138 1215 0.94

2 3 6.3e-32 5.4e-28 96.8 0.0 3 77 1602 1677 1600 1679 0.96

3 3 3.8e-31 3.3e-27 94.3 0.0 3 76 1896 1970 1894 1973 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	9.3e-27	8.1e-23	80.2	3	71	1140	1209	1138	1215	0.94
2	3	6.3e-32	5.4e-28	96.8	3	77	1602	1677	1600	1679	0.96
3	3	3.8e-31	3.3e-27	94.3	3	76	1896	1970	1894	1973	0.96

Sequence Information

Coding Sequence: ATGCGCCTGACAAGGGGCAACCAGGCGCAAGggCGCGCTACACTTGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacaggaacagcagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGTGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCGAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacaacagcagcaacaatcgccCATGCACTCGCCCATTGCTGCAACTAACAAtacgcaagcagcagcagctgcagcaactgcaacaacagcaggggTAGCACAGCAGCAATCAGTGCGCGATCTTGCTGAGGCAACAGCAAGTAGCAATTGCATCGACGACGATGGCGAGGACGATGACGAGGAGGATGCTTCGATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGATATGGAGTTGGAACCGGAGCATGTTGCTGATGGCGGTAGTGTTGCTGCCACTAAGTCATTGGCAAGAACTGATAGCATCGGCGATGCGAATGCAACACATAATGTTGTTGATGGTCATCAtcgtgatgatgatgatgacgatgctgCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaacaataataacagcaacaatactGATAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATTGCGCTGAGGACGACGATTGCACCAATAACAATACTaacaccaacaataataacaacaacaccaacaccaacaccaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaataacaacaacaacaataatcaacCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGGTAAGCAATCCATATTCATCGCTGACAAGCATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTGTTAATGCGGCTGcgacaaacaataacaacaacaacaacaatagcagcagcaacaacaacaacaacaacaacaataatcacaGTAGCCAGGgcagcgaaaacaacaacgagcTGAGCGCGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATgaagacgatgatgatgataatgataatgataatgagaaTGATAATGAGAATGATaacgataatgataatgatactGATAACCATGCTGAGCTGCGCgatgtcgatgatgatgaggaggacACGGATATGGCTAACGAGCAGCATCATTCTGCCATTGGCAACAATCGGCACAACGATGATAACGAAAAGGATGATGACGAGGAACAGGATGCCGATATATCcaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATGCGGCTATTGCCACAGCCGCCGCggccgcagcagccgctgcctGCGCCAACGATCCGAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCTTTGGCAGCCGAGGCTCTCAAGAATGGCGCCAGCGAGACAGCGAATGCTAACAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacAACCGCTAATCAAGTAACAGTAGAAGATGATggagatgatgatgaagatgaagatgaagaacaagaacaagaagcagtaagagcagcagcagaaacaatcACAAATGTAACGGCAAAGCCTGAAAATGATACATTGACCGAGGCCAACTTGCAGCCCAAAATCGAAATCATAGACACAGACGATGCTGATGGGGGCGGCACTGAGATTGCCGCTGGCCAAACACTAGAAGAACAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTgaaacatcaacagcagcagcagcaacgacaacagcagcagcagcagcagcagcagcagcaaccactgGGAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaactgttgccgccaccgccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagcatcagccacagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGTAACCGGCAGCGATCCACTgaatcaacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACATCATCTGCATCACGGTGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCACCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCaatgtggcagctgttgctgccgtttccgaggataacaacaacagcctgACGCCAAATGCGAATGCGGCTGTGGCCGCTGCAGCAATGGCTGCCCATGCCCAGCATGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAACTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCGGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTACGCTACAATATGGACAAGTATGCGAATCAGGCGCTCGACACTCTTCACATCTCGCGACGCGTACGTGAACTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTttgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAATCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGACTTGCACACATACTCAGCGAGGCATCGTCCCTGATGAAGAGCAGCGCGGTCGCcgcacagcagcaggagcatcAGCAGCTGCAGCTCCCCTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcaacagctgcagcatgcCACCGAGCATGCACAACGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCCgtacaccagcagcagcagcagcgggagcagCGCGAACAGCGCGAGGCCGCTCAGcgtgagcaacagcagcgcattCGTCACGACGAGCTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCGCGCGAAGCAGCCTTCCCCAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAACCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAAATAGccaagctgcaacagcagcaggcacagcagGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGTTTGATGGCACTACAGCAACAGGTGCTGAACGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATTAAGTTAAATGGACAGCGCTCATCGCTCGATCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGACGATAACGACAGAAGCTATCCATCCCTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCGCCAGCACCATCACTAACACAGACATCAGCGGGCAGCGGCAGTAATTCAAATGCAGCCAACTCAACGATTGCCAGCGGTCACGGAAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAATCAGAGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTAACGCCGCATCATTCACAGCCGCAGCGGCCCACCAAGGCGGTCCTGCCACCCATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGATATTGTGAGGCGTGTGAAGGAGGCCCTCTCCCAGTACAGCATCTCGCAGCGTCTATTCGGTGAGTCTGTGCTGGGATTGTCGCAGGGTTCCGTGTCGGATTTGTTGGCTCGACCCAAGCCTTGGCATATGCTCACACAAAAGGGTCGCGAGCCGTTCATCCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAACTGGTCGCCAGCCAGTATAAAATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAAGGATTGGCCAATAAAATGCAAGCGACGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCGGCagcaatgcaacagcaacagcaggccgCTGCCGCTCAAGCTGCCGCCGTACAGCAGGCGCAGGCACAGGCTCAAGCTCAGGCGAGCCAGCATCAGCAGgcgcagcaccaacagcaacagcaccaacaggtccatcagcatcagcaggcaCAACAgcaggcgcaggcgcaggcgcaggcacaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACCTCGCCCGGTTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCTAGTGGCATCCAGTCGGTTGCAGGTAATCCGACGGCAGTTGGCAGCACTCCGGGTAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGTACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCACCCACGGTTTATGAGATGGCCGCACTCACCCAGGATCTGGACACGCACGATATAACGACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGTCTATCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCAAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGGATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGACGGGAGGCGAGCAAGCGACGACGCAGCACTGGACCCAACCAGCaggacaacagcagcgataCGTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGCTCTGTGAGCTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTCTGGCATTTGCACTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTAAGTTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAATACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtctCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTcgcggctgctgctctgctcggtCGCAGCCTGGCCGGCATACCGGgcgcggcagctgctgctggcgctgcggcagctgcggctgctgcagtggGTGCCGCCGGCGGCGATGAGCCGCAGGCACTAAACCGCGCATTCAAGGAACAGGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGA
Protein Sequence: MRLTRGNQAQGRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTGTAAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPIAATNNTQAAAAAATATTAGVAQQQSVRDLAEATASSNCIDDDGEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSVAATKSLARTDSIGDANATHNVVDGHHRDDDDDDAADVATDEHEDDEEASLNISNNHNNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHCAEDDDCTNNNTNTNNNNNNTNTNTNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEVSNPYSSLTSIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNSSSNNNNNNNNNHSSQGSENNNELSAVFKSTDLTSTHQHNDDEDDDDDNDNDNENDNENDNDNDNDTDNHAELRDVDDDEEDTDMANEQHHSAIGNNRHNDDNEKDDDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHAAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASETANANSDEMPQQQAADAATTANQVTVEDDGDDDEDEDEEQEQEAVRAAAETITNVTAKPENDTLTEANLQPKIEIIDTDDADGGGTEIAAGQTLEEQLVNSYWRRGFETSTAAAATTTAAAAAAAAATTGSKTPTIYQNANVVQQQLLPPPPPPPPLPPSQQQQQQQQHFSAQQQQQYHQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQHQPQQQQLLQQQQHHHNSSNSSNSSSVTGSDPLNQHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAATIASTLNGNKSLLQAAAAANVAAVAAVSEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQQLQLPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGATANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGNTPAPPAPSLTQTSAGSGSNSNAANSTIASGHGSNSAAPSPLSNSILPPALSNQSEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSVAGNPTAVGSTPGSNEKKPMMMPVLGGVHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVSSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDEPQALNRAFKEQDERLGFVDANAEARAQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00543530;
90% Identity: iTF_00494897;
80% Identity: iTF_00595850;