Basic Information

Insect: Drosophila basisetae
Gene Symbol: ct_1
Assembly: GCA_035041595.1
Location: JAWNLB010000174.1:16175834-16225784[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-26 8.8e-23 80.0 0.0 3 71 1221 1290 1219 1296 0.94

2 3 7.4e-32 5.9e-28 96.5 0.0 3 77 1704 1779 1702 1781 0.96

3 3 4.4e-31 3.5e-27 94.0 0.0 3 76 1994 2068 1992 2071 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-26	8.8e-23	80.0	3	71	1221	1290	1219	1296	0.94
2	3	7.4e-32	5.9e-28	96.5	3	77	1704	1779	1702	1781	0.96
3	3	4.4e-31	3.5e-27	94.0	3	76	1994	2068	1992	2071	0.96

Sequence Information

Coding Sequence: ATGTCGCATGTTGTCGACACTGCCAATGGTTGGCCCGGCAAGGTGGAGGAATGTGGTTGTCTGTGGGGAGGATGGTGGGCAGACAGACCAGTGGGCAATGCAATTGACACAATTTTCAAACACGACGACAAGGCCGGTCGGCCAGCTGGCATTGACCAAGCCAAGCCGCACGTGGCAAGTTCGCGCGCTACACTAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACgccaggcagcaacagcgataacagcaacagcgacaacagcaatacaacaacagcagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTAGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAagcggcagcggctgctgcggcagcagcagctgcagcggcagcacaacaacagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACAAACAAtacgcaagcagcagcagcagctgctgcaactgcaacaacagcaggcgtAACACAGCAGCAATCAGCACGCGATCTTGCTGAGGCAACAGCAAGTAGCAATTGCATCGACGACGATGGCGAGGACGATGACGAGGAGGATGCTTCGATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGACATGGAGTTGGAGCCGGAGCATGTTGGTGATGGTGGCAGTGTTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGTTGATGGTCATCATcgtggtgatgatgatgatgacgatgttgCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaacaacaacaataataacagcaacaacaccgaTAGAAACAATAGCTGTAGTcgaaagagcaacaacagtgaAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATTGCGCTGAGGACGACGATTGCACCAATAACAATACtaacaccaacaataataacaacaacaacaacaacaccaacagcaacagcaatgagaaGCGCAAAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaataatcagcCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGAAAAATCGTCCCGCATTGGGTCTGCCCACTGCCTTTGACTTGGACACGGACTTGAACTTCCCCTACCTCTGCCCGTTGACCAGCATAATGCGTAccgcatatGTAAGCAATCCATATTCATCGCTCACAAGCATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGCCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAACAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTGTTAATGCGGCTGcgacaaacaataacaacaacaacaacaacaacaatagcagcagcaacaacaacaacaacaacaataatcacaGTAGCCAAGCCagcgaaaacaacaacgagttGAGCGCGGTATTTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATgaagacgatgatgatgataatgataatgataatgataacgaTAATGATAACCATGCTGAGCTGCGcgatgatggcgatgatgatgaggaggacACGGATATGgccaacgagcagcagcatgcTGCCATTGGCAACAATCGGCACGACGATGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATCTATCcaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATTCGGCAATTGCCACAGCTGCCgcggccgcagcagccgctgcctgCGCCAACGATCCGAACAAATTCCAAGCTTTGCTCCTGGAACGCACCAAAGCGCTGGCCGCCGAGGCCCTGAAGAATGGAGCCAGCGAGACGGCGAATGCAAGCAGTGATGAAAtgccgcaacaacaatcagcagacgcagcaacagccgctAATCAAGTAACAGTAGAAGATgatgcagatgatgatgaagatgaagcaCAAgaagcagcaagagcagcagccacatccaaatccaaatcagaAACAATCACAAATGCAACGGAAAAGCCTGAAAATGATACATTGGCCGAGGCCAACTTGCAGCCCAAAATCGAAATCATTGACACAGACGATGCTGATGGGGGGGGCGGCACTGAGATTGCCGCTGGGCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTGAAACatcaacagtagcagcagcagcaacgacaacagcagcagcgacagcagctgcagcagccactggGAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaactgttgccgccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcagcacttttctgcacagcaacaacaacaacaacaatatcaccaacagcaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagccacagcagcagcagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcaGCAACCGGCAGCGATCCACTGaatccacatcatcatcatgcgcACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACACCATCTGCATCACGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCACCATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCAGCGGCCGCTGCCaatgtggcagctgttgctgccgttgccgaggataacaacaacagcctgACGCCAAATGCGAATGCGGCTGTCGCCGCTGCAGCAATGGCTGCCCATGCACAGCACGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTtgcggctgccgctgccgctggccAGGATCCTCGAGCACAACATTTTCGCTTCGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTCGACACACTTCACATCTCGCGACGCGTACGCGAGCTGCTCTCCGTGCATAATATCGGGCAGCGGCTGTttgccaaatatattttgggACTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTCAGCGAGGCTTCGTCCCTGATGAAGAGCAGCGCTGTCGCcgcacagcagcaggagcatcAGCGTCGCCATGTCGTCGACGATACGCACAGCAACGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCAcctgcagccgcagcagcagcagcagctgcagcatgcCACCGAGCATGCACAGCGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCcgtacaccagcagcagcagcagcagcagcgggagcagcGCGAACAGCGCGAGGCCGCTCAacgtgagcagcagcagcgcattcGTCACGACGAACTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACGCCACGCGAAGCAGCCTTCCAAAGCTTTCTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAAGCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGGCATGTGCTCGAACGTGAGATAGccaagctgcaacagcagcaggcacagcagGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGTTTGATGGcattgcagcagcaggtgctgAACGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATCAAGTTAAATGGACAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGACGATAATGACAGAAGCTATCCATCGCTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAGCACACCAGCACCGCCCGCACCATCACTAACACAGACATCGgcgggcagcggcagcaattcAAATGCAGCCAACTCAACGGTTGCCAGCGGTCATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTTAGCAACCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTGACGCCGCATCATTCACAGCCGCAGCGGCCAACCAAGGCGGTGCTGCCACCGATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTATTCGGTGAGTCTGTGTTGGGCTTGTCGCAGGGCTCCGTTTCGGATTTGTTGGCACGACCCAAGCCTTGGCATATGCTGACACAAAAGGGCCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAACTGGTCGCCAGTCAGTATAAGATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAAGGATTGGCCAATAAAATGCAGGCGACGCTGCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCGGCagcaatgcaacagcaacagcaggcagctgccGCTCAAGCTGCCGCCGTACAACAGGCGCAGGCACAGGCTCAAGCTCAGGCCAGCCAGCACCAGCAGgcgcagcatcaacagcaacagcatcaacaggtacatcagcatcagcaggccCAACagcaggcgcaggcgcaggcacaggcacaggcccAGTTGCTGCATCATCAGAATATGCTGCTGACGTCGCCCGGTTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCAAGTGGCATCCCATCGGGTGCAGGCAATCCAACGGCAGCGGGCAGCACTCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCGCCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCTCTGCTCGCCAACAATATTGGCCAGAAGATCTTTGGCGAGGCGGTTCTGGGTCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGACGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGTTGAAGAACGAGCGACGGGAGGCGAGCAAGCGGCGACGCAGCACTGGCCCCAACCAGcaggacaacagcagcgataCGTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGCTCTGTCGGTTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCGCTGCGTTTGGCATTTGCGCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAACCCCATACCCAGTCGCGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtcTCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGtatttcgctgctgctgcactgctcGGTCGCAGCCTGGCCGGCATACCGggtgcggcggctgctgccggcgcagcggcagctgcggctgccgcAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAACGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAACATGAGCGACAACGAGTCCATTGAGGGTGGCAGCCACGAGCcggagcacacacacatcagcgAATACGAGAAGGCGCTGCAGAAATCGGCGCTCGCTTCGGCTGCGGCCGCTGCTGCATATATGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCGCAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGTGTCGCCGCGAGCAACACTGGCGTCgacatcggcagcagcagcagcgagcgcATCATCAACGGTGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGCGACAGCATCAAAGGTGGCGGCGGCGACTCCAATGCCGCCGATGCCGAGCACGACGATCACGCCCAGCTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAAGAGGACGACGAGGACGAACAagcccagcaacagcaaaagcagcagttAGACGATGCAACGCCTCTCGACGGCGATGCGGAAAAGCAGCTCAACGTGATCAATGAGGAAAAGTTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCGCTGCTGCACAGCAGGCGACGACAGCCGGTGCAGCCGCGTCGCCGGCAGCAACATCATGGAACTACTAA
Protein Sequence: MSHVVDTANGWPGKVEECGCLWGGWWADRPVGNAIDTIFKHDDKAGRPAGIDQAKPHVASSRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTTTAAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAAAAATATTAGVTQQQSARDLAEATASSNCIDDDGEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVGDGGSVAAAKSLARTDSIGDANATHNVVDGHHRGDDDDDDVADVATDEHEDDEEASLNISNNHNNNNNNNNSNNTDRNNSCSRKSNNSEAQHVALRDNNVNEQHVAHCAEDDDCTNNNTNTNNNNNNNNNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEKNRPALGLPTAFDLDTDLNFPYLCPLTSIMRTAYVSNPYSSLTSIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNNSSSNNNNNNNNHSSQASENNNELSAVFKSTDLTSTHQHNDDEDDDDDNDNDNDNDNDNHAELRDDGDDDEEDTDMANEQQHAAIGNNRHDDDNEKDEDEEQDADLSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASETANASSDEMPQQQSADAATAANQVTVEDDADDDEDEAQEAARAAATSKSKSETITNATEKPENDTLAEANLQPKIEIIDTDDADGGGGTEIAAGQTLEEQLVNSYWRRGFETSTVAAAATTTAAATAAAAATGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQQQHFSAQQQQQQQYHQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQQQQLLQQQQHHHNSSNSSNSSSATGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAATIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFQSFLLTPFFGGAAGMPGASANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGSTPAPPAPSLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIPSGAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTHISEYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGVAASNTGVDIGSSSSERIINGVCVMQGSDYNRDESDSIKGGGGDSNAADAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQAQQQQKQQLDDATPLDGDAEKQLNVINEEKLRLVRVRRLSSNGDADEHCAAAQQATTAGAAASPAATSWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495757;
90% Identity: iTF_00494897;
80% Identity: iTF_00485760;