Dnig008904.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- ct
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000294.1:1940759-1975818[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-26 1e-22 80.0 0.0 3 71 1125 1194 1123 1200 0.94 2 3 1.4e-31 7.1e-28 96.6 0.0 3 77 1603 1678 1601 1680 0.96 3 3 8.4e-31 4.2e-27 94.1 0.0 3 76 1893 1967 1891 1970 0.96
Sequence Information
- Coding Sequence
- ATGCGCCTGACAAGGGGCAACCAAGCTCAAGGGCGCGCTACACTAGCCGAGAAGGAAGTGAACACACTCAAGGAACAACTATCCACAGGCACGccaggcagcaacagcgataACAGCAATagcgacaacagcaatacagcaacaggagcagcggcagcggcattGGCCAGCGGCGAAGAGGAAGCCACTGGGAACAGCGAAAGTGAGAGCGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTagccaacacaaacacaccgtCGCCATCGCCGCCGTTGCTGAGtgccgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGTGGCGCTTGTTTAAATCCCAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAAgcggcagcggctgctgcggcggcagcagctgcagcggcagcacaacagcagcagcaacaatcgccCATGCACTCGCCCGTTGCTGCAACTAATAAtacgcaagcagcagcagctgcagcaactgctgcaacagcagggGTAACACAGCAGCAATCAGCACGGGATCTTGCTGAggcaacagcaagcagcaattgtaacgacgacgatgacgaggaCGATGACGAGGAGGATGCATCAATGCAATCAAATGTGGCGCATGCCGATGGTGATCTAGACGATGATGATATGGAGTTGGAACCGGAGCATGTTGCTGATGGCGGTAGTGTTGCTGCCGCTAAGTCATTGGCAAGAACTGATAGCATTGGCGATGCGAATGCAACACATAATGTTGATGATGGTCATCAtcgtgatgatgatgatgaggatgttGCCGATGTGGCTACCGATGAGCATGAGGATGACGAGGAAGCTAGTTTAAATATTAGCaataatcacaacaacaataacaacagcaacaatactGATAGAAACAATAGCTGTAGTCGAAGGAGCAACAACAGTGAAGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACATAGCGCCGAGGACGACGATTGCACCAATAACAACACTaacaccaacaataataacaacaacaccaacaccaacagcaacagcaatgagaAGCGCAAAAAGCGCaatgcaagcaacaacaacaacaacaataacaacaacaataatcagcCCGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGTCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTCTTAATGCGGCTGcgacaaacaataacaataacaacaacaatagcagcagcaacaacaacaacaatcacagtAGCCAGGGCAGCGAAAACAACAGCGAGTTGAGCGCGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCacaatgacgatgatgacgatgatgatgataatgacaatgataatgataacCATGCTGAACTGCGCGatgccgatgatgatgaggaagACACGGATATGGCTAATGAGCAGCAGCACGCTGCAATTGCCAACAATCGGCACAACGACGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATATATCCAATGCCACAGCGACAGCGGACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGCCCACATTCGGCTATTGCCACAGCTGCCGCggccgcagcagccgctgcctGCGCTAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCACTGGCCGCAGAGGCACTCAAGAATGGCGCCAGCGAGGCAGCGAATGCAAGCAGTGATGGTGAGTATATTAGCAGCGGCTATCTTCGGCCCACCTCAACCGAAATgccgcaacaacaagcagcagacgcagcaaCAACCGCAAATCAAGTAACAGTAGAAGATGATggagatgaagatgaagatgaagaacATGAAGCAGTAAAAGCACCAGCTACATCCAAGTCAGAAACAATCATAAATGTATCGGAAAAGCCTGAAAATGATACATTGACCGAGGCCAAATTGCAGCCTAAAATCGAAATCATAGACACAGACGATGCTGATGAGGCCGGCACTGAGATGGCCGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAACATCAACACcggcagcaacgacaacagcagcagcagcagcagcagtagcagcagctgcaacagcagcagctgcaacagcagcagcagcaacaactgggAGCAAAACGCcaacaatttatcaaaatgccAATgtggtgcagcagcaactgttgccaccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagccacagcagcaacagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagcagttcAGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCGGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCTAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCCGCGGCCGCTGCCAATGTGGCAGccgttgctgccgttgccgaggataacaacaacagcctgacgccaaatgcgaatgcggctgttgccgctgcagcAATGGCTGCCCATGCACAGCATGCGGCCGCTTTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGCGGCCGCCGCTGCGGCTGGCCAGGATCCTCGAGCACAACATTTTCGCTTTGCGGATGCTGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAATATGGACAAGTATGCGAACCAGGCCCTCGACACTCTTCACATCTCGCGGCGCGTACGTGAACTGCTCTCCGTGCATAATATCGGGCAACGGCTGTttgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGCCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTAAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGGCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTGAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCGGTCGCcgcacagcagcaggagcatcAGCGTCGCCATATCGGCGACGATACGCACAGCAATGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCCTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcagcagttgcagcatgCCTCCGAGCATGCACAACGCGAACAGCGCGAAGCGgccgccgctgttgctgccgtaCACCAGCAGCGGGAGCAGCGCGAACAGCGCGAGGCCGCTCAGCgtgagcaacagcagcgccttCGTCACGACGATCTGGGACCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCATTTCCCACTGCAATGGCCGCCGACGAGAATATGCGTCATGTACTCGAACGTGAAATAGCcaagctgcaacagcagcaggcacagcaGGCGCAGCAGGCTGCCAGTTTCCCCAACTTTTCCAGTTTGATGGCACTACAGCAGCAGGTGCTGAACGGTGCGCAGGATCTATCGCTGGCCAGCAAGGATATTAAGTTAAATGGACAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgctctaAGGATGGCGAACGTGGCGACGATAACGACCGGAGCTATCCAGCCTTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCGCCCGTACCACCACTAACACAGACATCAGCGGGCAGTGGCAGTAATTCAAATGCTGCCAACTCAACGGTTGCCAGCGGTCATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCGATTCAATACTGCCGCCAGCGCTGAGCAATCAGAGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCCCTGATTACACAGCCGCCCGTGACGCCGCATCATTCACAGCCGCAGAGGCCCACCAAGGCGGTGCTGCCACCCATCACTCAGCAACAGTTCGACATGTTCAACAATCTGAACACGGAGGATATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTATTTGGTGAGTCTGTGTTGGGATTGTCGCAGGGATCTGTTTCGGATTTGTTGGCTCGACCCAAGCCCTGGCACATGCTCACACAAAAAGGTCGCGAGCCGTTCATTCGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAACTGGTCGCCAGTCAGTATAAAATTGCGCCTGAGAAACTGATGCGCACGGGCAGTTACAGCGGCAGTCCCCAGATGCCCCAAggcttggccaacaaaatgcaaGCGACGCTTCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCGCAGGCGCAGCACATCATGCAACAGATGCAAGCAGCCGCCGCTATGTCGGCagcaatgcaacagcaacagcaggccgCTGCTGCTCAAGCTGCCGCCGTACAGCAAGCGCAGGCACAGGCTCAGGCACAGGCGAGCCAGCATCAGCAGgcgcagcatcagcagcaacagcatcagcaggtacatcagcatcagcaggcaCAACAGCAGGCGGCGGcgcaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACCTCGCCAGGGTTGCCGCCACAGCACGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCAGGTAATCCGACAGCACCCGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCCCCAAATGCAATGCGCAGTCTGCATCAGCACATGTCACCCACGGTTTACGAGATGGCCGCACTTACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCCCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCAGTGCTCGGTCTATCACAGGGATCCGTCTCGGAGCTGCTCAGCAAACCAAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGTGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGACGCAGCACTGGACCGAACCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACGAATGATTTCTACACGAGCAGCCCGGGACCGGGCTCTGTGGGCTCGTCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTAGCATTTGCCCTGGATCCGTATCCGAATGTCGGCACTATTGAGTTTCTGGCCAACGAGCTAAGCTTAGCGACGCGTACCATCACTAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCACATGGCCAGCCAGGTCAGGACAATCCCATACCCAGCCGTGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtctCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTATTTCgcggctgctgctctgctcggTCGCAGCCTGGCCGGCATACCGggtgcggcggctgctgctggtgcagcggcagctgcggCCGCTGCAGTGGGTGCCGCCGGCGGCGATGAGCTGCAGGCACTAAATCAAGCATTCAAGGAACAGATGAGCGGTTTGGATTTATCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGAATATCAGGACGAGCTCGAACTGGACGCAAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCACACACCCATAACCGAATATGAAAAGGCGCTGCAGAAATCGGCGCTCGCCTCGGCTGCGGCCGCTGCTGCATATCTGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCGGGTGCCAGCATACCGACAGCGGCTGGTGTCGCAGCGAACAACGCTGGCGtcgacatcagcagcagcagcagtgagcGCATCATCAATGGCGTCTGCGTCATGCAAGGCTCCGATTACAATCGCGATGAGAGTGACAGCATCAAAGGTGGCGGCGACTCCAATGCCACCGATGCCGAGCACGACGATCACGCTCAACTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTACGCATCAAGCAGGAAGAGGACGACGAGGACGAACaggcccagcagcagcaaaagcagcaattaGAAGATGCAACGCCTCTCGACAGCGATGCGGAGAAGCAGCTCAACGTTATCAATGAGGAGAAGTTGCGGCTGGTGCGCGTGCGTCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCACTGCTGCACAGCAGGCGACTACAGCCGGAGCGGCAGCGGCGCCGGCAGCAACATCATGGAACTACTAA
- Protein Sequence
- MRLTRGNQAQGRATLAEKEVNTLKEQLSTGTPGSNSDNSNSDNSNTATGAAAAALASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQSPMHSPVAATNNTQAAAAAATAATAGVTQQQSARDLAEATASSNCNDDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADGGSVAAAKSLARTDSIGDANATHNVDDGHHRDDDDEDVADVATDEHEDDEEASLNISNNHNNNNNSNNTDRNNSCSRRSNNSEAQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNTNTNSNSNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNSSSNNNNNHSSQGSENNSELSAVFKSTDLTSTHQHNDDDDDDDDNDNDNDNHAELRDADDDEEDTDMANEQQHAAIANNRHNDDNEKDEDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASEAANASSDGEYISSGYLRPTSTEMPQQQAADAATTANQVTVEDDGDEDEDEEHEAVKAPATSKSETIINVSEKPENDTLTEAKLQPKIEIIDTDDADEAGTEMAAGQTLEEQLVNSYWRRGFETSTPAATTTAAAAAAVAAAATAAAATAAAATTGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQHFSAQQQQQYHQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHIGDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHASEHAQREQREAAAAVAAVHQQREQREQREAAQREQQQRLRHDDLGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGAPANPFPTAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPALSHAARKSEGGNTPAPPVPPLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSDSILPPALSNQSEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAAAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAPGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDEYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGASIPTAAGVAANNAGVDISSSSSERIINGVCVMQGSDYNRDESDSIKGGGDSNATDAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQAQQQQKQQLEDATPLDSDAEKQLNVINEEKLRLVRVRRLSSNGDADEHCTAAQQATTAGAAAAPAATSWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00494897;
- 80% Identity
- iTF_00560153;