Doch003207.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- ct
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000021.1:9712044-9730039[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-27 7.1e-23 80.3 0.0 3 71 732 801 730 807 0.94 2 3 5.8e-32 4.8e-28 96.9 0.0 3 77 1215 1290 1213 1292 0.96 3 3 3.5e-31 2.9e-27 94.4 0.0 3 76 1505 1579 1503 1582 0.96
Sequence Information
- Coding Sequence
- ATGTTCCGCGACCTGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGTGGCCTGGAACAAACTCACCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAACAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCTGTTAATGCGGCTGcgacaaacaataataacaacaacaacaacaacaatagcagcagcaacaacaacaacaacaacaataataatcacagTAGCCAGGgcagcgaaaacaacaacgaattgAGCGGGGTGTTTAAATCAACAGATCTAACATCTACCCATCAGCACAATGACGATgaagacgatgatgatgataatgataacgataatgataatgataaccATGCTGAGCTGCGCgatgatggcgatgatgatgaggaggacACGGATATGGccaacgagcagcagcatgcTGCCATTGGCAACAATCGGCACAACGATGATAACGAAAAGGATGAGGACGAGGAGCAGGATGCCGATCTATCcaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATTTGAATGTGCTTAGCCCACATTCGGCGATTGCCACAGCTGCCgcggccgcagcagccgctgcgTGCGCCAACGATCCGAACAAATTCCAAGCCTTGCTCCTGGAACGCACCAAAGCGCTGGCCGCCGAGGCTCTGAAGAATGGCGCCAGCGAGACAGCGAATGCAAGCAGTGATGAAATgccgcaacaacaagcagcagacgcagcaacagccgctAATCAAGTAACAGTAGAAGATGATGCAGATGAAGATGCAGATGAAGATgcagatgaagatgaagatgaagcacaagaagcagcaagagcagcagccgcatccaaatccaaatcagaAACAATCACAAATGCAACGGAAAAGCCTGAAAATGATGCATTGACCGAGGCCAACTTGCAACCCAAAATCGAAATCATTGACACAGACGATGCTGATGGGGGGGCCGGCACTGAGATTGCCGCTGGGCAGACACTGGAAGAACAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTGAAACatcaacagtagcagcagcagccgcagcagcagcagcagcaacgacaacagcagcagcaacagcagctgcagctgcagcagccactggGAGCAAAACGCCaacaatttatcaaaatgccaatgtggtgcagcagcaacttttgccgccaccgccgccgccgctgccgccgtcacaacagcagcagcagcagcacttttctgcacagcaacaacaacaacaacaacaacaatatcaccaacagcaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccagcaccagcagcatcagccacagcagcagcagcagcagcagctgcttcaacagcagcaacatcaccacaacagcagcaatagcagcaacagtagtTCAGCAGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACATCATCTGCATCACGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCAGCATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCAGCGGCCGCTGCCAATGTGGCAgccgttgctgccgttgccgaggataacaacaacagcctgACACCAAATGCGAATGCGGCTGTCGCCGCTGCAGCAATGGCTGCCCATGCACAGCACGCGGCCGCATTGGGTGCACCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCGGCGTTTCAATTTGcggccgccgctgccgctggcCAGGATCCTCGAGCACAGCATTTTCGCTTCGCGGATGCCGAACTGCAAATGCAGCCGGGCGTCTCGATGGCCGGTCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTCGACACACTTCACATCTCGCGACGCGTACGCGAACTGCTCTCCGTGCATAATATCGGGCAGCGGCTGtttgccaaatatatattgggaCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCCGAGGATCGCCTTGCACACATACTCAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCTGTCGCcgcacagcagcaggagcatcAGCGTCGCCATGTCGTCGACGATACGCACAGCAACGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCGTTCTACAAGGACCAGCAGATTAAGCAtctgcagccgcagcagcagcaacagctgcagcatgCCACCGAGCATGCACAGCGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCCgtacaccagcagcagcagcagcagcagcgggagcaGCGCGAACAGCGCGAGGCCGCTCAgcgtgagcagcagcagcgcattcGTCACGACGAACTGGGACCGGACAAGATGGCGCGTCTCTACCAGGAGCTAATGACGCGCACGCCACGCGAAGCAGCCTTCCCAAGCTTTTTGTTGACGCCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCAACCGCCAATCCATTCCCCACAGCAATGGCCGCCGACGAGAATATGCGTCATGTGCTCGAGCGTGAGATAGccaagctgcaacagcagcaggcacagcaGGTGCAGCAGGCTGCCAGTTTTCCCAACTTTTCCAGTTTGAtggcactgcagcagcaggtgctgAATGGTGCGCAGGATCTATCGCTGGCCAACAAGGATATCAAGTTAAATGGACAGCGCTCATCGCTCGACCAGCAcagtggcggcagcagcagctgctccaagGATGGCGAACGtggcgacgacaacgacagaAGCTATCCATCGCTGTCGCATGCTGCTCGCAAATCGGAGGGCGGCAACACACCAGCACCGCCCGCACCATCACTAACACAGACATCGGcgggcagcggcagcaattcAAATGCAGCCAACTCAACGATTGCCAGCGGTCATGGCAGCAACTCAGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCAGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCACTGCAGCGAATGGCATCGATTACCAATTCACTGATTACACAGCCGCCTGTGACGCCGCATCATTCGCAGCCGCAGCGGCCAACGAAGGCGGTGCTGCCACCGATCACACAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAGGACATTGTGAGGCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTATTCGGTGAGTCTGTGTTGGGATTGTCGCAGGGTTCCGTTTCGGATTTGTTGGCACGACCCAAGCCTTGGCATATGCTGACACAAAAGGGTCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCATAAACTGGTCGCCAGCCAGTATAAGATTGCGCCTGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAAGgattggccaacaaaatgcagGCGACGCTGCCGATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCGCAGGCGCAACACATCATGCAACAGATGCAAGCAGCCGCCGCAATGTCGGCagcaatgcaacagcaacagcaggcagctgcCGCTCAAGCTGCCGCCGTACAACAGGCGCAGGCACAGGCTCAAGCTCAGGCCAGCCAGCACCAGCAGgcgcagcatcaacagcagcagcatcaacaggtgcatcagcatcagcaggcCCAACAGCAGGCGCAGGcgcaggcacaggcacaggcgcAGTTGCTGCATCATCAGAATATGCTGCTGACGTCGCCCGGCTTGCCGCCGCAACACGCAATCAGTCTGCCGGCAGCGGTCACCCCAAGTGGCATCCAATCGGGTGCAGGCAATCCAGCGGCAGCGGGCAGCACTCCGGGCAGCAACGAGAAGAAGCCAATGATGATGCCGGTGCTGGGTGGTGCACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCGCCCACGGTTTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATTAAGGAGGCTCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGTCTGTCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGCCGTGAACCGTTCATTCGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCgtctgcagctgctgaagAACGAGCGACGGGAGGCGAGCAAGCGGCGACGCAGCACTGGCCCCAACCAGCaggacaacagcagcgacacgTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCAGGCTCTGTCGGTTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAACAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCGCTGCGTTTGGCATTTGCGCTGGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAGCGAGCTGAGCTTAGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCCCATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCAACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtctCGTCGAGCTGCACAAGGAGCGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGtatttcgctgctgctgcactgctcGGTCGCAGCCTGGCCGGCATACCGggtgcggcggctgctgccggtgcagcggcagctgcggctgccgcAGTGGGTGCCGCCGGCGGCGATGAGCTCCAGGCACTAAATCAGGCATTCAAGGAACAGATGAGCGGCTTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGTGGCAGCCACGAGCCGGAGCATACACCCATCACCGAATACGAGAAGGCACTGCAGAAATCGGCGCTCGCTTCGGCTGCGGCCGCTGCGGCATATATGAGCAATGCGGCGCGCAGTTCGCGTCGCAAGCCGGCAGCACCGCAGTGGGTCAATCCGGCGGGTGCCAGCACACCGACAGCGGCTGGTGTCGTCGCGAGCAACGCTGGCGTCgacatcggcagcagcagcagcagcgagcggaTCATCAACGGTGTCTGCGTCATGCAAGGCTCCGACTACAATCGCGATGAGAGCGACAGCATCAAAGGTGGCGGCGGCGACTCCAATGCTGCCGATGCCGAGCACGACGATCACGCCCAGCTGGAGATTGAGCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAAGAGGACGACGAGGACGAACaagcccagcagcagcaaaagcagcagttaGATGATGCAACGCCTCTCGACAGCGATACGGAGAAGCAGCTCAACGTGATCAATGAGGAAAAGTTGCGTTTGGTGCGCGTGCGTCGCCTCAGCAGCAATGGCGATGCCGACGAGCACTGCGCTGCTGCACAGCAGGCGACGGCAGCCGGTGTGGCAGCGTCGCCGGCAGCAACATCATGGAACTACTAA
- Protein Sequence
- MFRDLIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNNSSSNNNNNNNNNHSSQGSENNNELSGVFKSTDLTSTHQHNDDEDDDDDNDNDNDNDNHAELRDDGDDDEEDTDMANEQQHAAIGNNRHNDDNEKDEDEEQDADLSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASETANASSDEMPQQQAADAATAANQVTVEDDADEDADEDADEDEDEAQEAARAAAASKSKSETITNATEKPENDALTEANLQPKIEIIDTDDADGGAGTEIAAGQTLEEQLVNSYWRRGFETSTVAAAAAAAAAATTTAAATAAAAAAATGSKTPTIYQNANVVQQQLLPPPPPPLPPSQQQQQQHFSAQQQQQQQQQYHQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQQQQLLQQQQHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGATANPFPTAMAADENMRHVLEREIAKLQQQQAQQVQQAASFPNFSSLMALQQQVLNGAQDLSLANKDIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPSLSHAARKSEGGNTPAPPAPSLTQTSAGSGSNSNAANSTIASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSGAGNPAAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLASELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPTAAGVVASNAGVDIGSSSSSERIINGVCVMQGSDYNRDESDSIKGGGGDSNAADAEHDDHAQLEIEQRFMEPEVRIKQEEDDEDEQAQQQQKQQLDDATPLDSDTEKQLNVINEEKLRLVRVRRLSSNGDADEHCAAAQQATAAGVAASPAATSWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00543530;
- 90% Identity
- iTF_00494897;
- 80% Identity
- iTF_00564552;