Dalg004712.3
Basic Information
- Insect
- Drosophila algonquin
- Gene Symbol
- br_4
- Assembly
- GCA_035041765.1
- Location
- JAWNKY010000899.1:616538-662864[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-20 5.8e-18 65.2 0.0 1 84 25 105 25 109 0.92 2 2 5 9.9e+02 0.1 0.0 80 104 170 194 162 197 0.83
Sequence Information
- Coding Sequence
- atggCTGCTGTACGTGGACATCAGTACTTTAGTCTGCGATGGAACAACTACCAGAACACGATGACATCCGTGTTCCAGCAACTGCGCGAAGATCTCTCCTTTGTCGATGTGACCTTGTCCTGCGAACACGGATCCCTCAAGGCACACAAGGTCGTCCTCTCCGCCTGTTCGACGTACTTTCAAAAGCTTCTGCTCGAGAATCCATGCAAACATCCAACAATCATCCTACCCGCCGATATCATATTCACAGATCTGAAAACAATCATCGATTTTGTCTACCGCGGTGAGATCGATGTCACCGAATCGGAACTACAGACCACTGGGCCCCCAGCCCGCACCCATAGCGAGTCCTCCATGtcgacgacgacagcagcagcacagagtCCGCAGTCCGCAGTCCACAATCCGCAGCGCCAAGCCACATCCAACCAGGCGGGGAACAGGAGACcgtcggaggaggagcaggagcaggagcaggagcagcagcatgagGATGAGTCGCGACTCACTGGCAACATCCCTGGCCTCTTGCGCACCGCCGAACAATTGAAGATCAAAGGCCTCTGCGAGACAGCGGAAAACGCTGATGATTTGAACGACGCGGCCACAGCGACAATAACCGTGTCGGAGAACATACAGCAGGCGGTCGTGGGGAGCATCGTCAATCCCAGCATAGTGCCGGGGGGAGCACCGTCGCCCTCgctcgagcagcagcaccaccagcaccaccaacaacagGCCCAAGCACAGGCCCAGGCTCAGGCCcaccagcaggagcaacaccagcaacaacagcagcagcaacagcagcagcagcaggtgcatgcccagcagcagcagcaacagcagcaaatcaACGCCTTGTTGACGCAGCACGGTGTGGCCAGCGGCAGTGCATCGTTGGGCGGACAGCTGCTCAGCACGACAGCGAGTGGGAGTAGCGGTAGCGGAGCAGGCGGCCTGCAGGCGCAATCCGGGCTGCAGCCGACGACGCGCAAGTCGCGCCTCAAGCGCTCCAAGTCTCCGGATCTGCAATTGGGcggaagcggcagcagcaacgtctcccagcagccacagccggcCCATCACCACTCGCAGACGCTGCTTCtgcagggccagagccagacctcCATTGTGAGCCTACAGCAAACGGCCGAGGGCAATTATATACCCGTGCCGGGCACCGGTGACGAGTCGGACCACGAGAACAGGCCGAGCAAAATCTGCAAGACAGAGCAGTCCCTGGCCTCGCCATCGTCCAACTCGTCCAGCCACTCGAACAATGCAACGGGCGTGAGCGGCGGAGTGACAGCAGCGGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTAACGGAGCACGTCGATCTGTCGTGCAACCCCAGTACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCACCTGGCGCAGCAGATCCATCGACTCGATCAATCTCCCATGCATTCGATAGCCCACCACCATACCGGGGACGAGAGCAACTCGAACCTGGTGCAGCACATCAAGAGCGAGGTGATCGATGCCAAACATTTGGCGGCTGCCCAGCAGCATGCGATCTcccaggcccagcagcagcatgcccatcatcaagcccaacagcagcagcagcaacacctcCATGCCCAGCAGCTGATGGCCCAGAGTcaggcccagcagcaacagcaacaacagcagcagcagcagcagcaacaacatcaacagcagcagcagcagcagcaacagcaacagcagcatcaccagcaacagcaggcggcggcagcggcagccgcagcagctgtACACGCTCAGCATGGTGGGCATGTGACGCACGCGGAGATGAGTGGGGCAACTGTCATGGAGATTGATCCGAGCCAGATTAAGCACGAGCCGGGCATGATTATAACGCCGGAGATTGTCAATATGATGTCCTCAGGGCATATGGATATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGTTCGCCGCACGATCAGAAGGAGCCGCACTACACAAACTTGGATCAGCagcatggaggaggaggaggagggctgGGCGGCAGCGTTTGCGGCCccggtggtgctggtggtggtgggggcatGGGTGGTggggctggctctggctctggcgagAAAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTCTGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAACGCCTTGGAGGCGTTGCGCTCGGGCCAAATATCCGCCAATAAGGCGTCCAAAGCTTTTGGCATACCCTCATCGACGCTCTACAAGATAGCTCGTCGTGAGGGTATCCGCCTGGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATCCGGGCGGGTAATACCTCTGTACAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCCACACCATGGTCTGAGGATGCCATGAACGAGGCCCTCAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTATGGCCGCTTCAAGCGGGGCAAGTACGATGTGGTGGCCAACACTAGTGGCGTGTCGCTGCTGAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCGCCAACGCCCCAGCATCATAGCACACCGCAGCATCACAGCTCGTCCCAGGGGCCGCCAACGCCGCAGCATATGCAACAGCATGTGGTGCatatgcagcaacagcaatcgcCCCACCAGGGCCACCATCCGCAGCACATGCAGCAGGACGTGGTGACGTCGAGCAGCCAGGTGGTGCatagccaacagcaacagcagcagcagcagcttcagcagaTCTATCAGCACCATGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQTTGPPARTHSESSMSTTTAAAQSPQSAVHNPQRQATSNQAGNRRPSEEEQEQEQEQQHEDESRLTGNIPGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGSIVNPSIVPGGAPSPSLEQQHHQHHQQQAQAQAQAQAHQQEQHQQQQQQQQQQQQVHAQQQQQQQQINALLTQHGVASGSASLGGQLLSTTASGSSGSGAGGLQAQSGLQPTTRKSRLKRSKSPDLQLGGSGSSNVSQQPQPAHHHSQTLLLQGQSQTSIVSLQQTAEGNYIPVPGTGDESDHENRPSKICKTEQSLASPSSNSSSHSNNATGVSGGVTAAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEVIDAKHLAAAQQHAISQAQQQHAHHQAQQQQQQHLHAQQLMAQSQAQQQQQQQQQQQQQQHQQQQQQQQQQQQHHQQQQAAAAAAAAAVHAQHGGHVTHAEMSGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGGGGGLGGSVCGPGGAGGGGGMGGGAGSGSGEKALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSSQGPPTPQHMQQHVVHMQQQQSPHQGHHPQHMQQDVVTSSSQVVHSQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00473700; iTF_00563820; iTF_00564007; iTF_00471533; iTF_00480783; iTF_00480942; iTF_00804305; iTF_00574904; iTF_00574730; iTF_00580633; iTF_00580824; iTF_00535963; iTF_00517630; iTF_00603264;
- 90% Identity
- iTF_00535963;
- 80% Identity
- iTF_00473700;