Dper009197.1
Basic Information
- Insect
- Drosophila persimilis
- Gene Symbol
- lolal
- Assembly
- GCA_003286085.2
- Location
- NW:19072798-19120503[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.7e-12 1.7e-08 33.6 0.0 1 40 752 792 752 795 0.90 2 4 4.8e-14 9.6e-11 40.9 0.1 2 39 807 844 806 847 0.94 3 4 1.1e-17 2.3e-14 52.5 0.0 1 45 861 906 861 906 0.98 4 4 1.1e-19 2.3e-16 58.9 0.0 1 43 913 956 913 957 0.97
Sequence Information
- Coding Sequence
- ATGGCTGCCGTACGAGGACATCAGTACTTTAGCCTGCGATGGAACAACTACCAGAACACGATGACATCCGTGTTCCAGCAACTGCGCGAAGATCTCTCCTTTGTCGATGTGACCTTGTCCTGCGAACACGGATCCCTCAAGGCACACAAGGTCGTCCTCTCCGCCTGCTCGACGTACTTTCAAAAGCTTCTGCTCGAGAACCCGTGCAAACATCCGACAATCATCCTACCCGCCGATATCATATTCACAGATCTGAAAACAATCATCGACTTCGTCTACCGCGGTGAGATTGATGTCACCGAATCGGAACTACAGGGCCTCTTGCGCACCGCCGAACAATTGAAGATCAAAGGCCTCTGCGAGACAGCGGAAAACGCGGATGACTTGAACGACGCGGCCACAGCGACAATAACCGTGTCGGAGAACATCCAGCAGGCGGTCGTGGGGAGCATCGTCAACCCGAGCATAGTGTCGGGGGGAGCAGCATCGCCGCCgctcgagcagcagcagcagcagcaccaccaccagcaccaccaagCCCAGGCCCAAGCACAGGCCCAGGCGCAGGCCCACCAGCAGgagcaacaccagcaacagcaggcgcagcagcaggcgcaggtgcatgcccagcagcagcagcaacagcagcaaatcAACGCCTTGCTGACGCACCACGGAGTGGCCAGTGGCAGTGCATCTTTGGGCGGACAGCTGCTCAGCGCGACAGCGAGtgggagcagcggcagcggagCAGGCGGTCTGCAGTCGCAGCCCGGGCTACAGCCGACGACGCGCAAGTCGCGACTCAAGCGATCCAAGTCTCCGGATCTGCAACTGGGCGGAggcagcgccagcgccagcggcagcagcagcgtctcccagcagccacagccggCCCACCACCACTCGCAGACGCTCCTTCTGCAgggccagagtcagagccagagccacagccagaccTCCATTGTGAGCCTACAGCAGACGGCCGAGGGCAATTATATACCCGTGCCGGGGACCGGTGACGAGTCGGACGTGGACCACGAACACGATcacgaccacgaccacgaccacTCCCACGATCACTCACACAATCTGTCACACTCCCACGACCACGAGCACGAGCAGGAGCACGAGCACGGCCACGATCACGAGAACAGGCCGAGCAAAATCTGCAAGACAGAGCAATCCCTGGCCTCGCCGTCGTCCAACTCGTCCAGCCACTCGAACAATGCAACGGGCGTGAGCGGCGGAGTGACTGCAGCGGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatGACTAGTTTAGGCATGGGCATGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTAACGGAGCACGTCGATCTGTCGTGCAACCCCAGCACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCACCTGGCGCAGCAGATCCACCGACTCGATCAATCTCCCATGCACTCGATAGCCCATCACCATACCGGGGACGAGAGCAACTCGAACCTGGTGCAGCACATCAAGAGCGAGGTGATCGATGCCAAGCACTTGGCGGCTGCCCAGCAGCACGCGCTCTCccaggcccagcagcagcatgccCATCATcaggcccagcagcagcagcagcaacacctcCATGCCCAGCAGCTGATGGCCCAGAGTcaggcccagcagcagcagcagcagcagcagcaacagcagcagcagcatcaacaacagcagcaacagcaacagcaccaccagcagcagcagcagcaggcggcggcagcggcagccgcagcagctGTACACGCCCAGCATGGTGGGCATGTGACGCACGCGGAGATGGGTGGGGCAACTGTCATGGAGATTGATCCGAGCCAGATAAAGCACGAGCCGGGGATGATTATAACGCCGGAGATTGTCAACATGATGTCCTCAGGGCATATGGATATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCGAACGGTTCGCCGCACGATCAGAAGGAGCCGCACTACACGAACTTGGATCAGCAgcatggaggaggaggaggagggctGGGCGGCAGCGTTTGCGGCCccggtggtgctggtggtggtgggggcaTGGGTGGTGgggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATCCCATCGACCACCCTCTGGCAGCGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAACGCCTTGGAGGCGTTGCGCTCGGGCCAAATATCCGCCAATAAGGCCTCCAAAGCCTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGTGAGGGCATCCGCCTGGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGACTTGGAGCGAGCATTGGAGGCGATCCGGGCGGGTAATACCTCTGTACAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCCACACCATGGTCCGAAGACGCCATGAACGAGGCCCTCAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATCCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGGGGCAAGTACGACGTGGTGGCCAACACCAGCGGCGTCTCGCTGCTGAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCGCCAACGCCCCAGCATCATAGCACGCCGCAGCATCACAGCTCGTCCCAGGGGCCGCCCACGCCGCAGCACATGCAGCAGCATGTGGTGCAtatgcagcaacagcagtcgcCCCACCAGGGCCACCATCCGCAGCACATGCAGCAGGACGTGGTGACGTCAAGCAGCCAGGTGGTGCAtagccaacagcaacaacagcagcagcagcagcttcagcagATCTATCAGCACCATGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGSIVNPSIVSGGAASPPLEQQQQQHHHQHHQAQAQAQAQAQAHQQEQHQQQQAQQQAQVHAQQQQQQQQINALLTHHGVASGSASLGGQLLSATASGSSGSGAGGLQSQPGLQPTTRKSRLKRSKSPDLQLGGGSASASGSSSVSQQPQPAHHHSQTLLLQGQSQSQSHSQTSIVSLQQTAEGNYIPVPGTGDESDVDHEHDHDHDHDHSHDHSHNLSHSHDHEHEQEHEHGHDHENRPSKICKTEQSLASPSSNSSSHSNNATGVSGGVTAAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEVIDAKHLAAAQQHALSQAQQQHAHHQAQQQQQQHLHAQQLMAQSQAQQQQQQQQQQQQQHQQQQQQQQHHQQQQQQAAAAAAAAAVHAQHGGHVTHAEMGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGGGGGLGGSVCGPGGAGGGGGMGGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSSQGPPTPQHMQQHVVHMQQQQSPHQGHHPQHMQQDVVTSSSQVVHSQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00473901;
- 90% Identity
- iTF_00535963;
- 80% Identity
- iTF_00574904;