Dhel020416.1
Basic Information
- Insect
- Drosophila helvetica
- Gene Symbol
- -
- Assembly
- GCA_963969585.1
- Location
- OZ018404.1:14050077-14067486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.8e-10 1.3e-06 28.4 0.0 7 40 653 687 652 690 0.87 2 4 6.7e-14 1.5e-10 41.0 0.1 2 39 702 739 701 742 0.94 3 4 1.6e-17 3.5e-14 52.7 0.0 1 45 756 801 756 801 0.98 4 4 4.3e-19 9.7e-16 57.7 0.0 1 43 808 851 808 852 0.97
Sequence Information
- Coding Sequence
- ATGTGGCATGAGGCACCAAAAAGCTGCAAGCTATGGCAGGGATTCGAGATGCCCAATGCTTTTTGGGGCCTCTTGCGCACCGCCGAACAATTGAAGATCAAAGGCCTCTGCGAGACAGCGGAAAACGCGGATGATTTGAACGACGCGGCCACAGCGACAATAACCGTGTCGGAGAACATCCAGCAGGCGGTCGTGGGGAGCATCGTCAATCCCAGCCTAGTGTCGGGGGGAGCGCCGTCGCCCTCgctcgagcagcagcagcagcaccaccaccagcaccaccaacaACAGGCCCAGGCTCAGGCCCACCAACAGgagcaacaccagcagcagcagcaacagcagcaggtgcatgcccagcagcagcagcagcagcaacagcaacaaatcaACGCCTTGCTGACGCAGCACGGCGTGGCCAGTGGCAGCGCATCTCTGGGCGGACAGCTGCTCAGCACGACAGCGAGTGGGAGCAGTGGAAGCGGCGCAGGCAGTCTGCAGGCACAGTCCGGGCTACAGCCGACGACGCGCAAGTCGCGCCTAAAGCGGTCCAAGTCTCCGGATCTGCAATTGGGCGGAGgaagcggcagtggcagcggcagcggcagcagcagcgtctcccagcagccacagccggcCCATCACCACGCGCAGACGCTGCTCCTgcagggccagagccagacctcCATTCTGAGCCTACAGCAAACGGCCGAGGGCAATTACATACCCGTGCCGGGCACCGGTGACGAGTCGGACGTGGAGCACGATCACGATCACGACCACGATCACGACCACTCCCACGATCACTCTCACAATCTCTCACACCCCCACGACCACGACCgcgaccacgaccacgaccacgaaCACGGCCACGAGCACGAGAACAGGCCGAGCAAAATCTGCAAGACAGAGCAGTCCCTGGCCTCGCCATCGTCCAACTCGTCCAGCCACTCGAACAATGCAACGGGCGTGAGCGGCGGAGTGACTGCAGCGGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgACTAGTTTAGGCATGGGCATGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTAACGGAGCACGTCGATCTGTCGTGCAACCCCAGTACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGATATTGACAATCACCTGGCGCAGCAGATCCATCGACTCGATCAATCTCCCATGCATTCGATAGCCCATCACCATACCGGGGACGAGAGCAACTCGAACCTGGTGCAGCACATCAAGAGCGAGGTGATCGATGCCAAGCACTTGGCGGCTGCCCAGCAGCATGCGATCTCccaggcccagcagcagcatgccCATCATCaggcccaacagcagcagcagcaacaacagcaacaacacctCCATGCCCAGCAGCTCATGGCCCAGAGtcaggcccagcagcagcagcaacagcagcagcagcatcaacagcagcagcaacagcagcagcaacagcagcatcaccagcagcagcagcaggcggcggcagccgcagcagctgTACACGCTCAGCATGGTGGGCATGTGACGCACGCGGAGATGAGTGGGGCAACTGTCATGGAGATTGATCCGAGCCAGATTAAGCACGAGCCGGGCATGATTATAACGCCGGAGATTGTCAATATGATGTCCTCAGGGCATATGGATATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGTTCGCCGCACGATCAGAAGGAGCCGCACTACACGAACTTGGATCAGCAgcatggaggaggaggaggaggagggctGGGCGGCAGCGTTTGCGGCCccggtggtgctggtggtggtgggggcaTGGGTGGTGgggctggctctggctctggcgaGAAAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTCTGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAACGCCTTGGAGGCGTTGCGCTCGGGCCAAATATCCGCCAATAAGGCGTCCAAAGCCTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGTATCCGCCTGGCGGCCCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGACCTGGAGCGTGCATTGGAGGCGATCCGGGCGGGTAATACCTCTGTACAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCCACGCCATGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATACACTTCAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGGGGCAAGTACGATGTGGTGGCCAACACTAGTGGCGTGTCGCTGCTGAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCGCCAACGCCCCAGCATCATAGCACGCCGCAGCATCACAGCTCGTCCCAGGGGCCGCCAACGCCGCAGCACATGCAGCAGCATGTGGTGCatatgcagcagcagcaatcgccCCACCAGGGCCACCATCCGCAGCACATGCAGCAGGACGTGGTGACGTCAAGCAGCCAGGTGGTGcacagccaacagcagcagcagcagcagcttcagcagATTTATCAGCACCATGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MWHEAPKSCKLWQGFEMPNAFWGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGSIVNPSLVSGGAPSPSLEQQQQHHHQHHQQQAQAQAHQQEQHQQQQQQQQVHAQQQQQQQQQQINALLTQHGVASGSASLGGQLLSTTASGSSGSGAGSLQAQSGLQPTTRKSRLKRSKSPDLQLGGGSGSGSGSGSSSVSQQPQPAHHHAQTLLLQGQSQTSILSLQQTAEGNYIPVPGTGDESDVEHDHDHDHDHDHSHDHSHNLSHPHDHDRDHDHDHEHGHEHENRPSKICKTEQSLASPSSNSSSHSNNATGVSGGVTAAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEVIDAKHLAAAQQHAISQAQQQHAHHQAQQQQQQQQQQHLHAQQLMAQSQAQQQQQQQQQHQQQQQQQQQQQHHQQQQQAAAAAAAVHAQHGGHVTHAEMSGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGGGGGGLGGSVCGPGGAGGGGGMGGGAGSGSGEKALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHFNLPYSSLYGRFKRGKYDVVANTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSSQGPPTPQHMQQHVVHMQQQQSPHQGHHPQHMQQDVVTSSSQVVHSQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00473901;
- 90% Identity
- iTF_00535963;
- 80% Identity
- -