Cran002190.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Criorhina ranunculi
Gene Symbol
PEG3
Assembly
GCA_951813785.1
Location
OX638381.1:39202132-39205770[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 7.2e-05 0.0072 17.0 0.7 1 23 153 175 153 175 0.95
2 14 0.00042 0.042 14.6 1.2 1 23 181 203 181 203 0.96
3 14 0.00014 0.014 16.1 0.3 1 23 303 325 303 325 0.98
4 14 0.0019 0.19 12.5 0.2 1 23 331 353 331 353 0.98
5 14 4.5e-05 0.0045 17.7 6.7 1 23 381 403 381 403 0.98
6 14 0.0061 0.61 11.0 0.3 1 23 414 436 414 436 0.94
7 14 0.015 1.5 9.8 0.6 1 23 442 465 442 465 0.94
8 14 0.19 19 6.2 0.4 5 19 476 490 473 491 0.91
9 14 0.00018 0.018 15.8 6.6 1 23 500 522 500 522 0.97
10 14 0.0098 0.98 10.3 0.5 2 23 528 549 527 549 0.96
11 14 6.8e-06 0.00068 20.3 0.3 1 23 558 580 558 580 0.98
12 14 0.00077 0.077 13.8 0.1 3 23 588 608 586 608 0.97
13 14 4.1e-05 0.0041 17.8 0.5 1 23 614 636 614 637 0.95
14 14 0.012 1.2 10.1 0.0 1 20 1074 1093 1074 1096 0.93

Sequence Information

Coding Sequence
ATGGACACTCAAACGTACGAAATCCCATCATGGGTTCCACAAATCGAACGTGGCGATGCTGGCGAAGACAATCAAGGTATAATTATCGGCGACTCCGAAGGAGATAGTGGTAATCATACCGACTACCTAGTGCACGAAGTGCCAACCAATCTTGATCAAATAGCTGCGGAAAATCTAATTTTTATGGCCCGGGATGGTCAGATGGAGATCATGGATGGCAGCAGTGATGTTGCAGACGGAAACGATGAGAGTGGTATTGTGAATTTTCATGATGATTATGCTGAAACCCAAATGGTAACCGAGGAGGTGATCACCGATGATTGGGTGCAACACCAAGGGGAAGAGAGAGTTGAGATACCCGCAGATCAGATTTGTGGTTCACTGTCACATATGCCTGCTCAAGATATCGAAGTGTCTTTGCCAACTGTCCAAGATGAGTATACTGCCTTGCGGCCTTATCCTTGTGATTTTTGCAGTCGAAGATTCCGCAAGAAAGCGAGTCTAATGAACCACATGGTTGCGCATCAAAACGATCGCCCGCATGTTTGTAAATTGTGTGGATCGCGGTTTTTTCGTCGAGCTGACCTTATTAATCATTTGAAAGCCCATGCCGAGGCGACGGAATACGAGGATAACGATTACTTCCAGCCTCAGAGACATTCGCCACAGAATGATCACTACTACGATCAGGACTGGTCTGCTGAAGTGAAATCAACCAAGAAATCGCGTGGCAAGCGTTCACCAAATGTGCCTAAAGAGGAGAACTACACAATTGATGAGAGTCTGCGGCAACGCcaggaacaacaacaagaagataATCACGACCAGCAGCACCATCAGTATGAAGAAGAAGTCGTTACGGAAGTGGAAACTAAACGGTTTCCCATCATTGACGAGCATAAACCTTTTGTTTGTCAACAATGTGGCTTGTCATTTGCCAGGGAGAAGGCAATGTTGTCCCATGTGAAGACGCATCGTAATGATTCGGCATTTGAATGCGGAACGTGCAACGAGATGTTTTGGGACCCAAACACCCTCCAAGAGCATCAGAAGTCGCATCAATTCGAAGCGAGCAATTCGGAATATGAACCGGATGTCGATAACGAAAGTGATTCTGAATCAGAGTACAAATACGGCGAATTCTACTGCCATCAGTGTGGCATGTCCTTCCATCGACAGGACCTGTTACGTCGTCACACCAAATCACACATTAAGAAGGAAGTGTACGACAACGATCAGCACTGTTGCAATACTTGTGGAGAAACCTTTGCCGAGGCCTTAGATTTACTGGCGCATGCAGAAATTCACGCGAGATATCCTCCTTTTAAATGCGTTCTCTGTGGAGAATCCTTTTTTGAGGAAACCACCATCAAACGCCATTTGACTAACCTGCACTCCACCGAAATGACTTCCAATTCGTGTATCCTCTGCGGCAAAGAATGCCGTGACCGTAAGGCCCTTATGAAACATGCTTGGGACCATTCAAGAGAAAAATGTCACTCGTGTTCAAAGTGCGGTAAGAACTTTCACAACAAAGCACGCTTAAAGCGACACATGTCGTCACACCGAGATAAATCGGTGGTCTGCAATGTGTGCAATGAGGAGTTTCCCGATGGAAGGTCTCTTTCGAATCACAGGCATTCGCATAGTGTCAATGCGTCTGGGAAACTCTTCCCTTGCAACGAGTGTGGAAAAACCTTTGGATCGAGGAGTTCGCAACAGATTCATGTGCGCATTCATACAGGAGAAAGGCCGTATGGGTGCCGTTACTGTTGGAAAGCTTTTGCCGACGGTGGAACTCTTAGAAAACATGAACGCATTCACACGGGTGAAAAACCGTACGCTTGCTCGGTGTGCCCACGTGCCTTTAACCAAAGAGTTGTGCTCAGGGAACACATTCGGTCGCATCACTCTGGTTTAGATACTAAACGTGGAACGTATTACTGTTCAGTGTGCTGTAGTGAGCTACCATCTTCTTTGGAGCTGATTCAGCATCTTATTCACCACAGTGACATCAATACTGCTATGCAACGACAGCCTGTGACTGGTCCACGGAAGTACAAACGTAGACGAAAGCTGAAACCGCACGAGATCGATCGCCTTCGCACAGAGAACAAAACCAACAGCAGCGACATCGATATCTCCGACTTTGATATGGACAATGTTGACGATCTTCTCGGCATTCCCACGTCTGGACCCAGCAATACGAACAAACACAATGATACAGCAACTGCAGCATCACAGCATTCGTCGTCAGCTGCTGTTTCATTAGAATCACCTAGCGGCAATGGTAGTTTGAAAAAACGCTACAACTCTACATGCAGCTCGGAGAAACTCTCTAACAATTGGCACATCAACTCCACTAGTGATGATACGTACAAATCGCTGCTCTCCAATCTGGAAAATACTCTACAGAGCATTGACACTCTGGTTGTGAGTAATCCATCATCATATGGAACCAACACCACTTCAGAAGCTccacctcctccaccacccGTGGTTGTTCCCAAAACGCCAAAGACTCCACGCCGAAAGAATGCGACTGTGTCGAAGACAACCAATCGCCCAAAGATGATTCATACCGAGAAAGCGCGTGTGCCCATCGAAAACGGCAAGCGAAAGTCAAAGACATTAGTCACACGCACCGAGCCTGCAGATTTGGATATATTTGCTCAGCGCTCAAAGCGCACGGCTCATCTCAATGATAACGAAATAATTTCACCAGACAAATACCTGCCAAATCAGATTCAATCTAGTCCCGTTCACATAAAACAAGAAGTGGCGTGCACTCGCAGTGAGTTGTTTGATGCCCAGCTGCTTCTGGAGGCGACATCTGCTCGCAGGGAGCTTGAGAAGTACAATCCCGCTATAGTCAACGATCTAGAGGAGATTCTACGATCTCCGGATAAGTCAAAGTCTCCGCGACGCCGAACAGTTAGTGAACGAACAGACGATGAGATCAAAACCGAACCTTATTCACCGAATCAGCAAAATTTCGACTTTGTCCGGAGATCGACCAGACCCAGACGTCCGGTGGTCAACCGAAAATACCTCGGCTATGAGACAGACCTGCCAGCACCGAAATCAAAACCACGGACAGAGAAACGAGTAATTGAGAATAAACCACCAGTAATTCAGTCCGTTACTAGTTCACCAGTCAAAAAGTCGTCTCCAGCACCATTACCTCCACCAATGCCTCCAGTTCGTAAACAGCACTACTTCGAGTGCGAAATGTGTTCCGCTGTGTTTCCCGATCGAGCTCAGCTTCTAGATCATGTACCTATTCATATATAA
Protein Sequence
MDTQTYEIPSWVPQIERGDAGEDNQGIIIGDSEGDSGNHTDYLVHEVPTNLDQIAAENLIFMARDGQMEIMDGSSDVADGNDESGIVNFHDDYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHMPAQDIEVSLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHVCKLCGSRFFRRADLINHLKAHAEATEYEDNDYFQPQRHSPQNDHYYDQDWSAEVKSTKKSRGKRSPNVPKEENYTIDESLRQRQEQQQEDNHDQQHHQYEEEVVTEVETKRFPIIDEHKPFVCQQCGLSFAREKAMLSHVKTHRNDSAFECGTCNEMFWDPNTLQEHQKSHQFEASNSEYEPDVDNESDSESEYKYGEFYCHQCGMSFHRQDLLRRHTKSHIKKEVYDNDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEETTIKRHLTNLHSTEMTSNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMSSHRDKSVVCNVCNEEFPDGRSLSNHRHSHSVNASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCSVCCSELPSSLELIQHLIHHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTENKTNSSDIDISDFDMDNVDDLLGIPTSGPSNTNKHNDTATAASQHSSSAAVSLESPSGNGSLKKRYNSTCSSEKLSNNWHINSTSDDTYKSLLSNLENTLQSIDTLVVSNPSSYGTNTTSEAPPPPPPVVVPKTPKTPRRKNATVSKTTNRPKMIHTEKARVPIENGKRKSKTLVTRTEPADLDIFAQRSKRTAHLNDNEIISPDKYLPNQIQSSPVHIKQEVACTRSELFDAQLLLEATSARRELEKYNPAIVNDLEEILRSPDKSKSPRRRTVSERTDDEIKTEPYSPNQQNFDFVRRSTRPRRPVVNRKYLGYETDLPAPKSKPRTEKRVIENKPPVIQSVTSSPVKKSSPAPLPPPMPPVRKQHYFECEMCSAVFPDRAQLLDHVPIHI