Dtri006983.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- PEG3
- Assembly
- GCA_963921185.1
- Location
- OY992530.1:85967683-85972046[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 8.5e-05 0.023 17.1 1.4 1 23 151 173 151 173 0.95 2 15 0.00023 0.063 15.8 1.9 1 23 179 201 179 201 0.96 3 15 0.00016 0.045 16.3 0.1 1 23 323 345 323 345 0.97 4 15 0.0042 1.2 11.8 0.2 1 23 351 373 351 373 0.98 5 15 9.1e-05 0.025 17.1 4.2 1 23 401 423 401 423 0.97 6 15 0.0085 2.3 10.9 0.4 1 23 434 456 434 456 0.94 7 15 0.11 30 7.3 2.1 1 23 462 485 462 485 0.94 8 15 0.25 70 6.2 0.4 5 19 496 510 493 511 0.91 9 15 0.00015 0.042 16.4 5.6 1 23 520 542 520 542 0.97 10 15 0.023 6.5 9.5 0.5 2 23 548 569 547 569 0.96 11 15 8.9e-06 0.0024 20.2 0.3 1 23 578 600 578 600 0.98 12 15 0.001 0.28 13.8 0.1 3 23 608 628 606 628 0.97 13 15 5.4e-05 0.015 17.8 0.5 1 23 634 656 634 657 0.95 14 15 0.14 38 7.0 0.1 1 23 667 689 667 689 0.97 15 15 0.039 11 8.8 0.0 1 20 1097 1116 1097 1119 0.93
Sequence Information
- Coding Sequence
- ATGGACACTCAAACATATGAGATCCCGTCATGGGTGCCACAAATAGAACGTGGTCATGTCAGCGATCAAGGAATTATAATTGCCGATTCTGAAGGTGACAGTGGAAACCATACTGACTACCTTGTGCATGAAGTGCCATCTAATATTGACCAAATAGCTGCAGAAAATTTGATCTTTATGGCTCGAGATGGCCAAATGGAGATCATCGATGGTGAAAGTGAAGTTAATGGGACGAATGATGATAGCGGTATTGTTAATTTTCACGACGACTACGCCGAAACTCAAATGGTCACCGAAGAGGTGATAACAGATGACTGGGTACAGCACCAAGGTGAAGAAAGagttgAAATACCTGCTGAGCAGATATGTGGCTCTTTATCGCATGTCACAGCTCAAGACATTGAAGTGCCTTTGCCAACAGTGCAAGATGAATACACCGCCTTAAGACCGTATCCTTGTGATTTTTGCAGTCGTAGATTCCGAAAAAAGTATAGTCTCATGAATCACATGGTGGCACATCAGAATGATCGACCACATGTGTGTAAATTATGTGGGTCACGTTTCTTTCGACGAAGTGATTTGATAAATCACTTAAAGGCTCATGCTGAGTCATCGGAGTTTGACGATAATGAATttttccAAACAGAAAGACAATCACCTCCGCCAACTGATCATTATTACGACCAAGATTGGAAAACAGAAATCAAATCGACAAAAAAACCTCGAGAAAAGCGCACACCAAAAGGTCCTCCTAAAGAGGAGAACTATACAATCGATGAGACTCTACATCAAAGACAACAATCACAACAAATCCATGAAGAACCAATTATTCAACAACAGCCGGAGGAACAGGAACAAGAGCAAGAGCAGGAGCAGGAGCAGCAACAATTCTATGAAGAAGAAACCCCTGTGGTGGAGGatataaaaaatgttcaatgttTTCCAGTTATCGATGAAAATAAGCCGTTTGTTTGTCAACAGTGTGGTTTGTCATTTGCCAGGGAAAAGGCATTATCATCTCATGTGAAGGCACATCGCAATGATTCAACTTTCGAATGCGGAACTTGCAACGAAATGTTCTGGGATGCCAACACACTGCAAGAGCATCAGAAGTCACATCAATTCGAAGCAAGTAACTCCGAATATGAACCGGATGTCGATAATGACAGTGATTCTGAGTCAGAATATAAATATGGAGATTTCTATTGCTCCCAGTGTGGCATGTCCTTTCATCGTCAGGACCTGCTGCGTCGTCACTCCAAATCCCATATCAAGAAGGAAGTTATTGATAAGGATCAACATTGCTGCAACACCTGCGGCGAGACATTCGTTGAGGCGTTAGATTTGCTTGCACATGCCGAGATTCATGCAAGATACCCACCTTTCAAATGTGTTCTATGTGGCGAGTCTTTCTTCGAAGAGTGCACCATTAAACGTCATCTGACCAACCTGCATTCAGCCGAAATGACTACCAATTCGTGTATTCTCTGCGGCAAGGAATGTCGAGATCGTAAGGCTCTTATGAAACACGCATGGGACCATTCACGGGAAAAATGCCATTCATGTTCGAAATGTGGAAAAAATTTCCACAATAAGGCCCGGTTAAAGCGCCATATGGCATCCCACCGAGACAAATCGGTTGTTTGTAATGTGTGTCAGGAAGAATTTCCCGATGGTCGTTCTCTGTCGAACCATAGGCATTCACATAGTGTGAATGCATCGGGAAAACTCTTTCCTTGCAATGAGTGTGGCAAGACTTTTGGATCAAGGAGCTCGCAACAGATTCATGTGCGTATTCATACTGGCGAAAGACCGTACGGATGTCGTTATTGCTGGAAAGCATTCGCCGATGGTGGAACTCTGAGGAAACATGAAAGAATTCATACAGGTGAAAAGCCATACGCGTGTTCGGTATGTCCACGTGCCTTTAATCAAAGAGTTGTACTAAGAGAGCATATACGCTCCCATCACTCTGGACTGGATTCCAAAAGGCAGGCCTATTACTGCTCGGTGTGCACCAGCGAACTACCATCATCGACTGAATTAATTCAGCATCTGATTCAACATAGTGACATCAATACAGCCATGCAGAGACAGCCTGTGACTGGCCCAAGGAAATATAAACGACGCCGAAAGCTAAAGCCACATGAAATTGACCGCCTGCGAACTGAGAACAAGAATAGCAGTGATATTGACATCTCCGATTTTGATATGGACAACGTCGATGATCTCCTTGGTATTCCTAATCAAACACCACcgacaaataaaacaaatagagCTCCAACACTTTCCGAACAAACGTCTTCCACTGCTGCTCTATTAGGATCAAATGAAGGCGATTCAAAGAAACAACGCTATAACTCGACTGGTAGTTCTGAGAAGTATGCCAGTAATTGGCACACAAAGCTGATCAACTCTTCGACAGAAGACACGTATAAATCACTTCTTTCAAATTTGGAGAATACTCTTCAGAGTATCGATACCCTGGTTGTGAGTAATCCTTCGTCGTATGGAAATACCGCTCCTGCTGAAGTTCCACCGCCAACTTCAACGTCAACAGCAGTAAGTCTTCCTAAAACGCCAAAGACTTCCCGACGAAAGAATGCATCATCATCAAAGGCATCTGGTCGTCCAAAGATGATTCACACAGAAAAATCACGTATGCCGACCGAGAATGGAAAACGTAAAACGAAAACATACGTTACGCGTACTGAGCCCACTGAATTGGAAATGTTCAGCCAGCGTTCAAAGTGTTCTTCATCCCATGCAAATGACTATGAAATCATCTCACCGGACAAATACCCGCCAAATCAGATTCAATCTAGTCCGGTTCATATAAAACAAGAGATCGTCTGCAGTCGTAGTGAACTTTACGACGCTCAGCTTCTTCTAGAAGCCACATCGGCCCGAAGAGAGCTCGATAAATACAATCCCGCTATAGTCAACGATCTGGAAGAAATACTTCGATCACCCGATAAATCGAAATCTCCAAGGCGTCGGACGATCAGTGATCGAACAGATGATGAGATCAAAGCAGAACCTCGCTCACCGATTCAACAAAATTTCGACTTTGTCCGGAGATCAACCAGACCCAGGCGGCCAGTGGTGAATAGAAAGTATCTTGCGTATGAAACCGATCTGCCTTCACCTGCATCGAAAGCAAAACCGCGTCCAGAAAAGCGAGAAAGTAAACCATTCGTGAGCGAACCTGTTCCTGCATTGAAATCATCTCGGATACCATCACCCCCATCACCACCGACGCCTCCGCCAGTGAGAAAGCAACACTATTTCGAGTGCGAGATGTGTTCGTCAGTGTTTCCCGATCGAGCACAACTTCTAGACCATGTACCTATCCATATTTAA
- Protein Sequence
- MDTQTYEIPSWVPQIERGHVSDQGIIIADSEGDSGNHTDYLVHEVPSNIDQIAAENLIFMARDGQMEIIDGESEVNGTNDDSGIVNFHDDYAETQMVTEEVITDDWVQHQGEERVEIPAEQICGSLSHVTAQDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKYSLMNHMVAHQNDRPHVCKLCGSRFFRRSDLINHLKAHAESSEFDDNEFFQTERQSPPPTDHYYDQDWKTEIKSTKKPREKRTPKGPPKEENYTIDETLHQRQQSQQIHEEPIIQQQPEEQEQEQEQEQEQQQFYEEETPVVEDIKNVQCFPVIDENKPFVCQQCGLSFAREKALSSHVKAHRNDSTFECGTCNEMFWDANTLQEHQKSHQFEASNSEYEPDVDNDSDSESEYKYGDFYCSQCGMSFHRQDLLRRHSKSHIKKEVIDKDQHCCNTCGETFVEALDLLAHAEIHARYPPFKCVLCGESFFEECTIKRHLTNLHSAEMTTNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVVCNVCQEEFPDGRSLSNHRHSHSVNASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDSKRQAYYCSVCTSELPSSTELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTENKNSSDIDISDFDMDNVDDLLGIPNQTPPTNKTNRAPTLSEQTSSTAALLGSNEGDSKKQRYNSTGSSEKYASNWHTKLINSSTEDTYKSLLSNLENTLQSIDTLVVSNPSSYGNTAPAEVPPPTSTSTAVSLPKTPKTSRRKNASSSKASGRPKMIHTEKSRMPTENGKRKTKTYVTRTEPTELEMFSQRSKCSSSHANDYEIISPDKYPPNQIQSSPVHIKQEIVCSRSELYDAQLLLEATSARRELDKYNPAIVNDLEEILRSPDKSKSPRRRTISDRTDDEIKAEPRSPIQQNFDFVRRSTRPRRPVVNRKYLAYETDLPSPASKAKPRPEKRESKPFVSEPVPALKSSRIPSPPSPPTPPPVRKQHYFECEMCSSVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_00894189;
- 80% Identity
- -