Basic Information

Gene Symbol
znf711
Assembly
GCA_955652365.1
Location
OY019130.1:71361476-71365157[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00011 0.016 16.3 0.8 1 23 152 174 152 174 0.95
2 15 0.00067 0.096 13.9 2.0 1 23 180 202 180 202 0.96
3 15 0.00013 0.018 16.1 0.3 1 23 306 328 306 328 0.98
4 15 0.0025 0.35 12.1 0.4 1 23 334 356 334 356 0.98
5 15 2.7e-06 0.00038 21.4 3.1 1 23 384 406 384 406 0.98
6 15 0.002 0.29 12.3 0.5 1 23 417 439 417 439 0.94
7 15 0.0062 0.89 10.8 0.6 1 23 445 468 445 468 0.94
8 15 0.18 25 6.2 0.4 5 19 479 493 476 494 0.91
9 15 0.00023 0.034 15.3 6.8 1 23 503 525 503 525 0.97
10 15 0.0089 1.3 10.3 0.5 2 23 531 552 530 552 0.96
11 15 1.1e-05 0.0016 19.4 0.3 1 23 561 583 561 583 0.98
12 15 0.0007 0.1 13.8 0.1 3 23 591 611 589 611 0.97
13 15 3.7e-05 0.0054 17.8 0.5 1 23 617 639 617 640 0.95
14 15 7.3 1e+03 1.2 0.4 1 23 650 672 650 672 0.89
15 15 0.018 2.6 9.4 0.0 1 20 1082 1101 1082 1104 0.93

Sequence Information

Coding Sequence
ATGGACACCCAGACGTACGAAATCCCAGCATGGGTTCCGCAAATGGAAAGTGGCCATACAGGCGTTGAAAGTCAAAGTATTATAATCGGCGACTCTGAGGGAGACAGTGGTAATCACACCGATTACCTCGTACATGAAGTGCCCTCTAACTTGGACCAAATAGCAGCAGAGAATCTAATATTTATGGCACGGGATGGACAAATGAAAATCATTGACGGCGGTAGCGAAGTGGACGCTAACGATGACAGTGGAATTGTTAATTTTCACGAAGATTATACAGAGACTCAGATGGTCACGGAAGAGGTGATAACCGATGATTGGGTGCAGCATCAAGGCGAGGAAAGGGTGGAAATACCAGCAGATCAAATCTGTGGTTCACTGTCTCATATATCGGCTCAGGACATAGAAGTGCCTTTACCAACTGTGCAGGATGAGTACACAGCTTCACGGCCGTATCCGTGTGATTTTTGTAGTCGACGGTTTCGTAAAAAAGTTAGTCTCATGAACCATATGGTGGCGCATCAAAACGATCGCCCGCATGTGTGCAAACTCTGTGGATCGCGTTTCTTTCGCCGAACAGACCTCATCAACCATCTCAAAGCCCACGCTGAGGCTTCCGaatatgaagaaaatgactATTTTCAGCCGCAGATGCATTCTCCAGAAAATGATCACTATTACGATCAGGACTGGTCGACGGAAGTGAGGTCAACAAAAAAATCGCGTTGCAAACGAACGCCAAAAGTGCCTAAGGAGGAGAACTATACAATTGACGAGTCATTGCGACAGGAGCACACGCAAGAGCAGTATCAACACGAAAATCAGCAGGAATCGAGTCAACTTCAAACAGAGAACGCTTCCAAAGCGGAGACAAAACCTGACCTTCAGTTCCCAATAATTGATGATAATAAACCGTTCGTATGTCAGCAGTGTGGCTTGTCGTTTGCCCGGGAGAAGGCAATGCTGTCACACGTCAAAACCCACCGCACCGACTCAGCCTATGAGTGTAATACGTGCAATGAAATGTTTTGGGACACGAACGCTCTCCAAGAGCATCAGAAATCACACCAATTCGAAGCTAGTAACTCGGAGTATGAGCCCGATATCGATAACGAAAGTGACTCCGAATCAGAATACAAATACGGTAATTTCTACTGCGACCAATGCGGAATGTCATTCCACCGCCAAGACTTGCTCCGCCGGCACATAAAATCACACATCAAAAAAGAGGTCTTCGATAAGGACCAGCATTGTTGCAACACCTGCGGGGAGTCATTCTCAGAGGCCTTAGACCTGCTGGCACATGCCGAGATTCACGCTAGATATCCACCCTTTAAATGCGTCTTGTGTGGTGAGTCGTTTTATGAGGAGACCACGATTAAACGCCACTTGACAAACTTGCACTCTGCCGAAATGACTTCCAATTCGTGCATCCTCTGCGGAAAGGAGTGTCGGGATCGAAAAGCGTTAATGAAGCATGCATGGGATCATTCGAGGGAAAAGTGCCACTCGTGTTCAAAGTGCGGCAAAAATTTCCACAACAAAGCCCGCTTGAAGCGGCACATGACGTCGCACCGTGACAAGTCGGTGGTTTGTAACGTGTGTAACGAAGAATTCCCGGACGGTAGATCTCTGTCGAATCACCGACATTCGCACAGTGCCAACGCAACCGGAAAGCTCTTCCCTTGCCAGGAGTGCGGCAAAACTTTTGGATCACGAAGCTCGCAGCAAATACATGTTCGTATTCACACGGGAGAACGGCCTTATGGGTGCCGATACTGCTGGAAAGCCTTTGCAGATGGTGGAACTCTCAGGAAGCACGAACGCATCCACACAGGCGAGAAACCTTACGCATGTTCTGTGTGCCCACGTGCCTTCAACCAGCGCGTTGTGCTTAGAGAGCACATTCGGTCGCATCATTCTGGGCTGGACACGAAGCGGGGTACGTATTATTGCTCCGTGTGCTGTAGCGAGCTGCCCTCCTCGGTGGATCTGATTCAGCATCTGATCCAACACAGCGACACAAATACGGCAATGCAGCGGCAACCAGTGACTGGCCCAAGGAAGTACAAGCGTCGGCGGAAGCTTAAACCGCACGAAATCGATCGTCTTCGAGCAGAGAACAAGACTACCAGCAGCGACATCGACATATCCGATTTTGATATGGAAAACGTCGACGAACTATTCGGCATCCGGACGGCGGGATCAAGCAATGCGAACAAGCCTCACAGAGACAGCGCTCAGGTCTCGACTCAGGCTTCGTCATCGGTTGCTAGTTTGGAGTCACCCGGTGTAGATGGGTTGAAAAAGCGCTACAACTCCGGTGGCAGTCCCGAAAAACTGCCCAACAATTGGCACACAAAGCTGATCAACTCAACCAACAACGACACGTTTAAGTCGCTCTTGTCGAACCTGGAAAACACCTTGCAAACCATCGATACACTAGTCGTGAGCAATGCAGCATCATACGGAACCAGCTCAGTCAGTGCTGCAGCAGATGTGACGTCGCCATCCACTACGACAGCTACCTCTAAAGCCCCAAAAACGCCGCGTCGCAAGAATGCGTCCTCTTCCTCAAAAGCGCCTCATCGTCCCAAAATGATTCACACCGAAAAAGCACGTGTTTCGGTGGAGAACGGAAAACGAAAGTCGAAAACCTTTGTAACACGCACCGAAGCCGCGGATTTAGATATGTTCGCTCAACGCTCGAAGCGTTCCAATCACCAGAGCGACTATGAGATCATAACTCCGGACAGGTATCCCCCGAATCAAATCCAGTCTAGTCCCGTGCACATCAAGCAAGAAGTCGTGTGTTCACGCAGTGAGCTGTACGAAGCCCAGCTATTGTTGGAGGCCACCTCTGCGCGCAGAGAGTTTGATAAGTACAATCCTGCCATAGTCAATGACCTTGAGGAGATTCTGCGATCCCCAGAGAAGAAGTCGCCCCGTCGTCGCACAATTAGCGATCGGACGGACGATGAAATCAAAGTCGAGCCCTACTCTCCCAACCAACAGAATTTTGACTTTGTGCGCAGATCAACCAGGCCTAGGCGACCGGTCGTGAATAGAAAATACATTGGCTACGAGACAGAGCTGCCGACACCAAAACAAAAGACACGTACAGAGAAACGTGTTCCGGATAGTAAACCGCTAGTAAGCGAAACCGTGGACGACAGCTTGCCAGTTATGAAATCATCTTCCACGCCACCGTCTCCAACAAAATCCCCAGTTCGAAAGCAACATTTTACATGTGAAATGTGCTTCGCCGTGTTTCCCGATCGAGCTCAGCTTCTAGATCATGTACCTATTcacatataa
Protein Sequence
MDTQTYEIPAWVPQMESGHTGVESQSIIIGDSEGDSGNHTDYLVHEVPSNLDQIAAENLIFMARDGQMKIIDGGSEVDANDDSGIVNFHEDYTETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHISAQDIEVPLPTVQDEYTASRPYPCDFCSRRFRKKVSLMNHMVAHQNDRPHVCKLCGSRFFRRTDLINHLKAHAEASEYEENDYFQPQMHSPENDHYYDQDWSTEVRSTKKSRCKRTPKVPKEENYTIDESLRQEHTQEQYQHENQQESSQLQTENASKAETKPDLQFPIIDDNKPFVCQQCGLSFAREKAMLSHVKTHRTDSAYECNTCNEMFWDTNALQEHQKSHQFEASNSEYEPDIDNESDSESEYKYGNFYCDQCGMSFHRQDLLRRHIKSHIKKEVFDKDQHCCNTCGESFSEALDLLAHAEIHARYPPFKCVLCGESFYEETTIKRHLTNLHSAEMTSNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMTSHRDKSVVCNVCNEEFPDGRSLSNHRHSHSANATGKLFPCQECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCSVCCSELPSSVDLIQHLIQHSDTNTAMQRQPVTGPRKYKRRRKLKPHEIDRLRAENKTTSSDIDISDFDMENVDELFGIRTAGSSNANKPHRDSAQVSTQASSSVASLESPGVDGLKKRYNSGGSPEKLPNNWHTKLINSTNNDTFKSLLSNLENTLQTIDTLVVSNAASYGTSSVSAAADVTSPSTTTATSKAPKTPRRKNASSSSKAPHRPKMIHTEKARVSVENGKRKSKTFVTRTEAADLDMFAQRSKRSNHQSDYEIITPDRYPPNQIQSSPVHIKQEVVCSRSELYEAQLLLEATSARREFDKYNPAIVNDLEEILRSPEKKSPRRRTISDRTDDEIKVEPYSPNQQNFDFVRRSTRPRRPVVNRKYIGYETELPTPKQKTRTEKRVPDSKPLVSETVDDSLPVMKSSSTPPSPTKSPVRKQHFTCEMCFAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00389816;
90% Identity
iTF_00671717;
80% Identity
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