Basic Information

Insect: Xylota sylvarum
Gene Symbol: zfh1
Assembly: GCA_905220385.1
Location: LR999958.1:29236906-29240573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.3e-05 0.0088 17.0 0.7 1 23 151 173 151 173 0.95

2 15 0.00075 0.091 13.9 2.0 1 23 179 201 179 201 0.96

3 15 0.00014 0.017 16.1 0.3 1 23 304 326 304 326 0.98

4 15 0.0033 0.4 11.8 0.2 1 23 332 354 332 354 0.98

5 15 1.9e-05 0.0023 18.8 5.9 1 23 382 404 382 404 0.97

6 15 0.0093 1.1 10.4 0.3 1 23 415 437 415 437 0.94

7 15 0.0038 0.46 11.6 0.6 1 23 443 466 443 466 0.95

8 15 0.2 24 6.2 0.4 5 19 477 491 474 492 0.91

9 15 0.00012 0.014 16.4 5.6 1 23 501 523 501 523 0.97

10 15 0.014 1.7 9.8 0.5 2 23 529 550 528 550 0.96

11 15 6.9e-06 0.00083 20.3 1.0 1 23 559 581 559 581 0.98

12 15 0.00078 0.094 13.8 0.1 3 23 589 609 587 609 0.97

13 15 4.2e-05 0.005 17.8 0.5 1 23 615 637 615 638 0.95

14 15 0.044 5.2 8.3 0.1 1 23 648 670 648 670 0.97

15 15 0.012 1.4 10.1 0.0 1 20 1081 1100 1081 1103 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.3e-05	0.0088	17.0	0.7	1	23	151	173	151	173	0.95
2	15	0.00075	0.091	13.9	2.0	1	23	179	201	179	201	0.96
3	15	0.00014	0.017	16.1	0.3	1	23	304	326	304	326	0.98
4	15	0.0033	0.4	11.8	0.2	1	23	332	354	332	354	0.98
5	15	1.9e-05	0.0023	18.8	5.9	1	23	382	404	382	404	0.97
6	15	0.0093	1.1	10.4	0.3	1	23	415	437	415	437	0.94
7	15	0.0038	0.46	11.6	0.6	1	23	443	466	443	466	0.95
8	15	0.2	24	6.2	0.4	5	19	477	491	474	492	0.91
9	15	0.00012	0.014	16.4	5.6	1	23	501	523	501	523	0.97
10	15	0.014	1.7	9.8	0.5	2	23	529	550	528	550	0.96
11	15	6.9e-06	0.00083	20.3	1.0	1	23	559	581	559	581	0.98
12	15	0.00078	0.094	13.8	0.1	3	23	589	609	587	609	0.97
13	15	4.2e-05	0.005	17.8	0.5	1	23	615	637	615	638	0.95
14	15	0.044	5.2	8.3	0.1	1	23	648	670	648	670	0.97
15	15	0.012	1.4	10.1	0.0	1	20	1081	1100	1081	1103	0.93

Sequence Information

Coding Sequence: ATGGACACTCAAACCTACGGAATCTCATCTTGGGATCCGCAAATGGAGCGTAGCCATGCTGCCGATGACAATCAAGGCATCATTATCGGTGACTCGGAAGGAGACAGTAGTGGTAATCATACAGACTATCTAGTACCAAGTAATCTTGATCAAATAGCTGCGGAAAATCTAATTTTCATGGCTCGAGATGGTCAGATGGAGATTATTAACGGTAGTAGTGATGTTGCCGATGGAAACGATGACAGTGGTATCGTGCACTTTCATGAAGAATACGCCGAAACACAAATGGTTACCGAGGAGGTGATCACCGATGATTGGGTGCAACATCAAGGCGAAGAGAGAGTTGAAATACCTGCAGATCAGATTTGTGGTTCTCTGTCACATATACCTGCTCAGGACCTAGAGGTTCCTCTGCCAACGGTGCAGGATGAATACACCGCTTTGCGGCCGTATCCTTGTGATTTTTGCAGCCGACGATTCCGCAAGAAAGCTAGTCTTATGAACCACATGGTGGCGCATCAAAACGATCGGCCACATGTATGTAAGTTATGTGGTTCACGTTTCTTCCGTCGAACAGACCTCATCAATCACTTAAAAGCCCATGCCGAAGCATCAGAATCTGATAATGATTATTTTCAGCCGCAGCAAATTTCGCCGCAGAATGATCACTACTACGATCAGGATTGGTCTACTGAAGTGAAGCCGACGAAGAAATCACGCGGCAAGCGTATCCCAAAGTTGCCGAAAGAACAGAACTACACTATAGACGAGACACTACGTCAACGGCAAGAGCATCATGAGCAAGAACATTATCATGAGGAGCAACATCAGGAGCAATACGAAGAGGAGGTCATCACAGAAGaggaaaaagttatttcacggtTTCCCATCTTAGATGAGAATAAACCGTTTGTCTGTCAACAGTGTGGCTTATCGTTTGCTCGGGAGAAGGCAATGCTATCACATGTGAAGACTCATCGCAATGATTCAGCATTTGAATGTGGAACATGTAATGAGATGTTCTGGGATGCAAACACCCTGCAGGAACATCAGAAGTCACACCAATTCGAAGCGAGCAATTCAGAATATGAACCGGATGTGGAAAATGAAAGCGATTCCGAGTCAGAATATAAATACGGTGAATTTTTTTGTCACCAGTGTGGCATGTCTTTCCATCGCCAGGACTTGTTGCGTCGCCACATCAAATCGCACATTAAGAAGGAGGTTTGCGATAAGAACCAACATTGTTGCAGCACCTGCGGGGAGACCTTCGCAGAGGCCTTAGATCTGCTGGCGCATGCTGAGATTCATgcaagatgtcctccttttaaGTGCGTTCTCTGTGGTGAGTCGTTCTTCGAGGAATCCACCATCAAGCGTCATCTGACGAACCTGCACACTGCCGAAATGACTCCCAATTCGTGCATATTGTGCGGAAAGGAATGTCGCGATCGTAAGGCTCTTATGAAGCACGCGTGGGATCACTCTCGAGAAAAGTGTCACTCGTGTTCAAAGTGCGGTAAGAACTTCCACAACAAGGCGCGTTTGAAGCGTCACATGGCTTCTCATCGAGACAAATCGGTGGTCTGCAATGTGTGCAATGAGGAGTTTCCCGATGGCAGGACTCTATCGAACCATAGGCACTCGCATAGTATCAACGCCTCTGGGAAACTTTTCCCCTGTCACGAATGTGGCAAAACCTTTGGTTCGAGGAGCTCGCAACAGATCCATGTTCGCATTCATACGGGCGAAAGACCGTACGGGTGTCGTTACTGTTGGAAGGCATTCGCCGATGGTGGGACTCTTAGAAAACACGAACGCATTCATACCGGAGAAAAACCGTACGCTTGTTCTGTGTGTCCACGGGCCTTTAACCAAAGAGTTGTCCTCAGAGAGCACATAAGATCGCATCACTCTGGTATGGACACAAAACGCCAAACGTATTACTGCTCGGTGTGCTCTGATGTGTTGCCTTCATCTTCGGAACTGATTCAGCATCTCATACAGCACAGCGACATCAATACAGCAATGCAAAGACAGCCTGTGACTGGACCACGAAAGTACAAGCGTCGCCGAAAGCTGAAACCGCACGAGATTGATCGCCTTCGCACAGAAAACAAGACCAATAGCAGTGACATCGATATTTCCGACTTCGATATAGACAACGTCGATGATATTCTTGGCATTCCTACTGCGACACCAAGcaacacaaacaaacacaacCGAGATACAGTTACTGCAGCATCTCAGCACTCATCGTCCGCGACTGTGTCATTGGAATCAACCTGCGAGGATGGTGTTAGTTCGAAAAAACGCTACAACTCTACAGGCAGCTCTGAGAAACTCTCGAACAATTGGCACACCAAGTTGATCAACTCCACTAGTGATGATACCTACAAATCATTGCTCTCCAATCTGGAGAATACTTTGCAGAGCATCGACACTCTCGTTGTGAGTAACCCATCATCGTACGGAACAAGTACCACAGTTCCCACAGAAGCTCAACACTCTCCAGCACCTGTGGCTCTCCCAAAGACGCCAAAAACTCCACGCCGAAAGAATACAAGCGCATCGAAGACAGCTAATCGCCCTAAGATGATTCACACCGAGAAATCACGAGCTCCCATCGAGAACGGCAAGCGAAAGTCGAAAACCTTCGTTACGCGATCTGAACCCACAGATCTGGATATGTTTGCTCAGCGCCCGAAGCGCACAACTCATGCCAATGACTATGAAATCATTTCACCTGACAAATACCCGCCAAATCAAATTCAATCTAGTCCCATTCATATTAAACAAGAAGTCATATGCACTCGCAGTGAGTTGTACGATGCCCAACTACTGTTGGAAGCCACATCCGCTCGAAGGGAACTTGAAAAGTATAATCCCGCTATAGTCAACGATCTGGAAGAGATTCTGCGATCTCCTGACAAATCAAAGTCACCGCGTCGTCGGACGATAAGCGAGCGAACAGACGATGAAATCAAACCGGAACCATATTCGCCGAATCAACAGAATTTTGACTTCGTAAGGCGATCGACAAGACCAAGACGACCAGTGGCTAATCGAAAATATTACGGCTATGAGACAGAACTACCAGCACCGAAACCAAAGCCACGAGCAGAGAAACGTGTAGAGAAACCACTCATCACTCAACCTGTGATCAGTTTACCGGTAGAAAGGCCATCTCCAGAACCATCACCTCCCCCACCAAAATCACCCGTGCGTAAGCAACATTATTTCGAATGTGAGATGTGTTCGGCTGTGTTCCCTGATCGGGCCCAGCTTCTAGATCATGTACCTATTCATATATAG
Protein Sequence: MDTQTYGISSWDPQMERSHAADDNQGIIIGDSEGDSSGNHTDYLVPSNLDQIAAENLIFMARDGQMEIINGSSDVADGNDDSGIVHFHEEYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHIPAQDLEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHVCKLCGSRFFRRTDLINHLKAHAEASESDNDYFQPQQISPQNDHYYDQDWSTEVKPTKKSRGKRIPKLPKEQNYTIDETLRQRQEHHEQEHYHEEQHQEQYEEEVITEEEKVISRFPILDENKPFVCQQCGLSFAREKAMLSHVKTHRNDSAFECGTCNEMFWDANTLQEHQKSHQFEASNSEYEPDVENESDSESEYKYGEFFCHQCGMSFHRQDLLRRHIKSHIKKEVCDKNQHCCSTCGETFAEALDLLAHAEIHARCPPFKCVLCGESFFEESTIKRHLTNLHTAEMTPNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVVCNVCNEEFPDGRTLSNHRHSHSINASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGMDTKRQTYYCSVCSDVLPSSSELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTENKTNSSDIDISDFDIDNVDDILGIPTATPSNTNKHNRDTVTAASQHSSSATVSLESTCEDGVSSKKRYNSTGSSEKLSNNWHTKLINSTSDDTYKSLLSNLENTLQSIDTLVVSNPSSYGTSTTVPTEAQHSPAPVALPKTPKTPRRKNTSASKTANRPKMIHTEKSRAPIENGKRKSKTFVTRSEPTDLDMFAQRPKRTTHANDYEIISPDKYPPNQIQSSPIHIKQEVICTRSELYDAQLLLEATSARRELEKYNPAIVNDLEEILRSPDKSKSPRRRTISERTDDEIKPEPYSPNQQNFDFVRRSTRPRRPVANRKYYGYETELPAPKPKPRAEKRVEKPLITQPVISLPVERPSPEPSPPPPKSPVRKQHYFECEMCSAVFPDRAQLLDHVPIHI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00389816;
90% Identity: iTF_01541607;
80% Identity: -