Llat014238.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- PEG3
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010000307.1:500956-510277[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00015 0.027 16.2 0.8 1 23 198 220 198 220 0.95 2 15 0.001 0.19 13.6 1.9 1 23 226 248 226 248 0.96 3 15 0.00015 0.027 16.2 0.1 1 23 357 379 357 379 0.97 4 15 0.0039 0.7 11.8 0.2 1 23 385 407 385 407 0.98 5 15 8.5e-05 0.015 17.0 4.2 1 23 435 457 435 457 0.97 6 15 0.0079 1.4 10.8 0.4 1 23 468 490 468 490 0.94 7 15 0.1 18 7.3 2.1 1 23 496 519 496 519 0.94 8 15 0.24 42 6.2 0.4 5 19 530 544 527 545 0.91 9 15 0.00014 0.025 16.3 5.6 1 23 554 576 554 576 0.97 10 15 0.022 3.9 9.4 0.5 2 23 582 603 581 603 0.96 11 15 8.3e-06 0.0015 20.2 0.3 1 23 612 634 612 634 0.98 12 15 0.00094 0.17 13.7 0.1 3 23 642 662 640 662 0.97 13 15 5e-05 0.009 17.7 0.5 1 23 668 690 668 691 0.95 14 15 0.097 17 7.4 0.3 1 23 701 723 701 723 0.96 15 15 0.036 6.4 8.7 0.0 1 20 1131 1150 1131 1153 0.93
Sequence Information
- Coding Sequence
- ATGGCTAACAAAGTACTTGCAAGTACTTCGCCACCTCCAAAGGAAAACGCCTCATGTGGAGTAGATGATTCTGTACGTTCCATTGAAAATAACAAGCAAAGACTCAATCAGGACGATAAGAACAAATTGATCATACAGAATATGGATACTCAAACATATGAGATTCCGTCATGGGTGCCACAAATCGAACGTGGTCATGTTAGTGACCAAGGAATTATAATAGCCGATTCGGAAGGTGACAGTGGCAATCATACTGACTACCTGGTGCACGAAGTTCCATCTAACATTGACCAAATAGCTGCAGAAAATCTTATATTTATGGCCCGCGATGGCCAAATGGAGATAATCGATGGTGAAAGTGATGTTCATGGTGCGAATGATGATAGCGGTATTGTTAAATTTCATGACGACTATGCCGAGACTCAAATGGTCACTGAAGAGGTGATCACTGATGACTGGGTGCAGCATCAAGGTGAAGAAAGAGTTGAAATACCTGCTGAGCAGATATGTGGCTCTTTGTCCCATATCACAGCTGAAGACATTGAAGTGCCTTTGCCAACGGTGCAAGATGAATACACCGCCTTGCGACCATATCCTTGTGATTTTTGCAGTCGCAGATTCCGAAAAAAGGTTAGTCTGATGAATCACATGGTGGCACATCAGAATGATCGACCACATGTGTGTAAACTATGTGGGTCGCGTTTCTTTCGGCGTAATGATCTGATAAATCACTTAAAAGCTCATGCCGAGTCATCAGAGTTCGATGATAATGAATTTTTTGAAACAGAAAGACAATCACCACCGCCAAGTGACCATTACTACGACCAAGATTGGCAAACAGAAATCAAAACGATCAAGAAACCTCGAGGAAAGCATGCACCGAAAGGTCCTTTTAAGGAGGAGAACTACACAATCGATGAGACTCTACATCACAGACAACAAACACAACCAATGCAACAAGAACCAAATAATCATCAACATCCGCATGAACAGTTCTATGAAGAAAGCACTGTGATAGAGGATATAAAAAACGTTCAACGTTTTCCCGTTATAGATGAAAATAAGCCATTTGTGTGTCAACAGTGTGGTTTGTCATTTGCCAGGGAAAAGGCATTATCATCGCATGTGAAGGCACATCGTAATGATTCTACATTCGAATGTGGAACTTGCAATGAAATGTTCTGGGACGCCAACACTCTGCAAGAGCATCAGAAATCACACCAATTCGAAGCAAGTAACTCCGAATATGAACCGGATGTCGATAATGAGAGTGATTCTGAGTCAGAATATAAATATGGAGATTTCTATTGCTCCCAATGTGGCATGTCCTTTCATCGTCAGGACCTGTTGCGTCGTCACTCCAAGTCTCACATCAAGAAGGAAGTCATTGACAAGGACCAGCATTGTTGCAATACATGTGGAGAGACGTTCGTTGAGGCATTAGATTTGCTTGCACATGCAGAGATTCACGCAAGATATCCACCTTTTAAATGTGTTCTGTGCGGTGAGTCTTTCTTCGAAGAGTGCACCATTAAACGTCATCTGACCAATCTGCATTCAGCCGAAATGACTACCAATTCGTGCATTCTCTGCGGCAAGGAATGTCGGGATCGTAAGGCTCTTATGAAGCACGCTTGGGACCATTCGCGGGAAAAATGCCACTCGTGTTCGAAATGTGGAAAGAATTTCCACAATAAGGCGCGCCTAAAGCGCCACATGGCATCGCACCGAGATAAATCGGTGGTTTGTAATGTTTGTCAGGAAGAATTTCCCGATGGTCGTTCCCTGTCAAATCATCGACATTCACATAGTGTGAACGCATCGGGAAAACTCTTTCCTTGCAATGAGTGCGGCAAGACTTTTGGGTCAAGAAGCTCACAACAGATTCATGTGCGTATTCATACTGGCGAGAGGCCGTACGGATGTCGTTATTGTTGGAAAGCATTTGCCGACGGTGGAACTTTAAGAAAACATGAACGGATTCATACAGGTGAAAAGCCATATGCGTGTTCGGTGTGTCCACGAGCCTTTAATCAACGTGTTGTACTGAGAGAGCACATACGCTCCCATCACTCTGGACTGGATTCCAAAAGGCAGACATTTTACTGCTCAGTGTGCTCCAGCGACCTAACATCATCGACTGAATTGATTCAGCACCTCATTCAACATAGTGACATCAATACTGCCATGCAGCGGCAGCCTGTGACTGGTCCAAGGAAATACAAACGCCGACGAAAGTTAAAACCACATGAGATTGACCGTATGCGAACAGAGAACAAAAATAGTAGTGATATTGACATCTCTGATTTTGATATGGACAATGTCGATGATCTCCTCGGGATTCCTAATCAGACACCGCCGACAAACAAAAACAATAGAGCTCCAACGCTTTCCGAACAAACGTCTTCCACTGCTGCACTATTAGGATCATCCGAAGGCGATTCAAAAAAACAACGCTATAACTCGACTGGTAGTTCTGAGAAGTATACCAGCAATTGGCACACAAAGTTGATCAACTCTTCTACAGAAGATACATATAAATCACTGCTGTCAAACTTGGAGAATACTCTTCAGAGTATCGATACCCTGGTTGTGAGTAATCCTTCGTCTTATGGAAATAGCGCTCCTGCCGAAGTTCCACCGCCAACTCCAACGTCAACAGCCGTAAGTCTTCCTAAAACGCCAAAGACTACCCGACGAAAGAATGCATCTTCATCAAAAGCATCCAGTCGTCCAAAGATGATTCACACTGAAAAAACGCGCTTGCCGATCGAAAATGGAAAACGTAAAACGAAAACATTCGTTACGCGCACTGAGCCCACTGAATTGGACATGTTCGGCCAGCGTTCAAAATGTTCTTCATCGCATGCGAATGACTATGAAATCATCTCACCGGACAAATACCCGCCAAATCAGATACAATCTAGTCCGGTTCATATAAAACAAGAAAACGTCTGCAGTCGTAGTGAGCTGTACGATGCTCAGCTTCTTCTAGAAGCCACATCGGCTCGCAGAGAGCTCGATAAATACAATCCCGCCATAGTCAACGATCTGGAAGAAATCCTTCGATCACCCGACAAATCTAAGTCCCCACGGCGTCGCACGATCAGTGATCGTACGGATGATGAAATCAAAACGGAGCCTCACTCCCCGATTCAGCAAAATTTTGACTTTGTCCGGAGATCAACTAGACCCAGGCGGCCAGTGGTGAATAGAAAGTACCTTGCTTATGAAACCGATTTGCCTTCCACTTCATCAAAAACAAAACCGCGTGCAGAAAAACGGGAAACTAAACCATTCATAAGCACACCTGCTCCTGGATTGAAGTCATCACCGATACCATCCCCGCCGACACCACCCACGCCTCCTCCAGTTCGAAAGCAACACTATTTTGAGTGCGAGATGTGTTCGTCAGTGTTCCCAGATCGAGCACAACTTCTGGATCATGTACCTATTCATATTTAA
- Protein Sequence
- MANKVLASTSPPPKENASCGVDDSVRSIENNKQRLNQDDKNKLIIQNMDTQTYEIPSWVPQIERGHVSDQGIIIADSEGDSGNHTDYLVHEVPSNIDQIAAENLIFMARDGQMEIIDGESDVHGANDDSGIVKFHDDYAETQMVTEEVITDDWVQHQGEERVEIPAEQICGSLSHITAEDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKVSLMNHMVAHQNDRPHVCKLCGSRFFRRNDLINHLKAHAESSEFDDNEFFETERQSPPPSDHYYDQDWQTEIKTIKKPRGKHAPKGPFKEENYTIDETLHHRQQTQPMQQEPNNHQHPHEQFYEESTVIEDIKNVQRFPVIDENKPFVCQQCGLSFAREKALSSHVKAHRNDSTFECGTCNEMFWDANTLQEHQKSHQFEASNSEYEPDVDNESDSESEYKYGDFYCSQCGMSFHRQDLLRRHSKSHIKKEVIDKDQHCCNTCGETFVEALDLLAHAEIHARYPPFKCVLCGESFFEECTIKRHLTNLHSAEMTTNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVVCNVCQEEFPDGRSLSNHRHSHSVNASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDSKRQTFYCSVCSSDLTSSTELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRMRTENKNSSDIDISDFDMDNVDDLLGIPNQTPPTNKNNRAPTLSEQTSSTAALLGSSEGDSKKQRYNSTGSSEKYTSNWHTKLINSSTEDTYKSLLSNLENTLQSIDTLVVSNPSSYGNSAPAEVPPPTPTSTAVSLPKTPKTTRRKNASSSKASSRPKMIHTEKTRLPIENGKRKTKTFVTRTEPTELDMFGQRSKCSSSHANDYEIISPDKYPPNQIQSSPVHIKQENVCSRSELYDAQLLLEATSARRELDKYNPAIVNDLEEILRSPDKSKSPRRRTISDRTDDEIKTEPHSPIQQNFDFVRRSTRPRRPVVNRKYLAYETDLPSTSSKTKPRAEKRETKPFISTPAPGLKSSPIPSPPTPPTPPPVRKQHYFECEMCSSVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_00664289; iTF_00984454; iTF_01318438; iTF_00427496; iTF_00665071; iTF_01396758; iTF_00426556; iTF_00694881; iTF_00694022; iTF_00665923; iTF_00335300; iTF_00974982;
- 80% Identity
- -