Cgro005247.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- PEG3
- Assembly
- GCA_963082955.1
- Location
- OY720144.1:73695247-73698923[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 7.5e-05 0.0074 17.1 0.8 1 23 150 172 150 172 0.95 2 15 0.00079 0.078 13.8 2.0 1 23 178 200 178 200 0.96 3 15 0.00092 0.091 13.6 0.1 1 23 318 340 318 340 0.97 4 15 0.004 0.4 11.6 0.8 1 23 346 368 346 368 0.98 5 15 4.9e-05 0.0048 17.7 6.7 1 23 396 418 396 418 0.98 6 15 0.0066 0.65 10.9 0.3 1 23 429 451 429 451 0.94 7 15 0.0045 0.45 11.5 0.6 1 23 457 480 457 480 0.95 8 15 0.21 20 6.2 0.4 5 19 491 505 488 506 0.91 9 15 3.2e-05 0.0032 18.2 5.6 1 23 515 537 515 537 0.97 10 15 0.015 1.5 9.8 0.5 2 23 543 564 542 564 0.96 11 15 7.2e-06 0.00071 20.3 1.0 1 23 573 595 573 595 0.98 12 15 0.00082 0.081 13.8 0.1 3 23 603 623 601 623 0.97 13 15 4.4e-05 0.0043 17.8 0.5 1 23 629 651 629 652 0.95 14 15 1.9 1.8e+02 3.2 0.5 1 23 662 684 662 684 0.93 15 15 0.012 1.2 10.1 0.0 1 20 1086 1105 1086 1108 0.93
Sequence Information
- Coding Sequence
- ATGGACACCCAAGCCTATGGAATCCCCTCGTGGGTTCCGCAAATCGATCGTGGCCATGGCAATCAGGAAATCATAATCGGTGACTCGGAAGGCGATAGCGGCAATCATACGGACTATCTTGTGCATGAAGTGCCAACAAATCTTGACCAAATAGCTGCGGAGAATCTAATTTTCATGGCTCGAGAGGGTCAGATGGAGATCGTAGATGGCAACACTGATGGTACCGACGGAAACGACGACAGTGGCATTGTTAACTTTCATGAGGATTATGCTGAAACCCAAATGGTTACAGAGGAGGTCATCACGGACGATTGGGTGCAGCATCAAGGCGAAGAGAGAGTCGAGATACCCGCAGATCAGATCTGTGGCTCGCTGTCTCATATACCAGCTGAAGATATTGAAGTGCCTTTGCCAACAGTGCAAGATGAATACACCGCATTGCGTCCGTATCCTTGTGATTTTTGCAGTCGGCGATTTCGCAAAAAGGGCAGCCTGATGAATCACATGGTGGCGCATCAAAACGATCGTCCTCATGTTTGTAAGCTGTGTGGGTCACGTTTCTTTCGTCGAACAGATCTTATCAATCACTTGAAAGCCCACGCAGAGGCGTCCGAGTATGAGGACAATGATTACTTTGAGCCGCAAAGACATTCGCCACAGAACGACCACTACTACGATCAAGACTGGTCTGCCACTGAAGCGAGGCCGGCAAAGAAATCCCGCAGTAAGCGTACACCAAATGTGCCTAAGGAGGACAACTACACCATCGATGAAACCCTACGCCATCGAAGCGAACATTCACAGCTGCAACACCAACTACCAGCCCATCAAGAGCATCAACCAGATCACTATtatcagcatcagcagcaggAGCACTATGAAGAAGAGATCGTAACAGAAGTGGACACAAAGATGGTGCAACAATTTCCCATCATCGATGAGAACAAGCCGTTCGTCTGTCAACAGTGTGGTTTGTCATTTGCCCGAGAAAAGGCAATGCTGTCACATGTCAAGGCGCATCGCAATGACTCTGCATTTGAGTGTGCTACGTGCAACGAGATGTTTTGGGATGCCCATACCTTGCAAGAGCATCAAAAGTCGCATCAATTCGAAGCGAGCAACTCGGAATACGAACCCGATGTGGACAATGAAAGTGATTCCGAATCAGAGTACAAATACGGTGAGTTCTATTGCCACCAGTGTGGCATGTCCTTCCATCGGCAGGATTTGTTGCGTCGCCACACCAAGTCACACATCAAGAAGGAGGTGATCGACAAGGATCAACATTGTTGCAACACTTGTGGAGAGACTTTTGCCGAGGCCTTAGATCTACTGGCGCATGCGGAAATTCATGCGAGATATCCACCTTTCAAGTGTGTTCTTTGTGGTGAAACCTTCTTTGAAGAGTCGACCATTAAGCGCCATCTTACCAATCTCCATGATACCGAAATGACATCAAATTCGTGCATCCTGTGCGGCAAGGAATGTCGTGATCGGAAGGCTCTTATGAAGCACGCCTGGGACCATTCGAGGGAGAAGTGCCATTCGTGTTCAAAGTGTGGAAAAAGCTTCCACAATAAAGCCCGCTTAAAGCGGCACATGGCTTCGCACCGGGACAAGTCGGTGGTCTGCAATGTGTGCAATGAGGAGTTTCCCGATGGGAGGACTCTCTCGAACCACAGACACTCGCATAGTGTCAACGCATCGGGGAAACTCTTTCCTTGTCATGAGTGTGGAAAGACTTTCGGGTCGAGGAGTTCGCAACAAATCCATGTGCGTATTCATACAGGAGAACGGCCGTACGGTTGTCGTTATTGTTGGAAAGCATTCGCCGATGGAGGAACTCTTCGGAAACATGAACGCATACACACGGGTGAGAAGCCTTACGCCTGTTCAGTGTGCCCACGTGCCTTTAATCAGAGGGTTGTCCTCAGGGAGCACATTAGGTCACACCACTCAGGGTTGGACACGAAACGTGGAACGTATTACTGTTCAGTTTGTTGCAGCGAGCTGCCCTCTTCCTCGGAGTTGATTCAGCATTTGATTCAGCACAGCGACATCAACACAGCTATGCAACGGCAGCCTGTGACGGGTCCCCGAAAGTACAAACGTCGTCGAAAGTTGAAACCACACGAGATCGATCGCCTTCGCACTGATAACAAGACCAATAGCAGTGACATCGACATCTCCGACTTTGATATGGACAATGTTGATGATCTCCTCGGCATCCCCAGCTCAGCGCCCACCCATGCGAACAAACACAACCGAGATGCAACTGCGGCAGTATCGCAGCACTTACCGGCAGCGGCAGGCGTGTCTTTAGAATCACAAGGTGACGGCCAGAAAAAACGCTACAACTCAACAGGCAGCTCGGAGAGACTATCCAACAACTGGCACACCAAATTGATCAATTCCACCACCGATGACACCTACAAATCACTGCTTTCCAATCTCGAAAACACTTTACAGAGTATCGATACTCTGGTCGTGAGTAATCCCTCATCATACAACAACACTGCCACTAGTATTCCGGCGGAACCGACAGCTCCTGTTGCTGCCACAAAAGTGCCAAAGACGCCACGAAGAAAAAATACAGCTGCGTCGAAAACAAACAATCGCCCCAAAATGATTCACACCGAAAAGGCGCGTGTCCCTATCGAGAACGGCAAACGAAAGTCGAAAACGTACGTAACCCGCACCGAACCAACTGATTTAGATATGTTTGCGCAGCGCTCTAAGCGCACGACCCACGCAAATGATTACGAAATCATCTCGCCGGATAAATACCCGCCGAAGCAGATCCAATCTAGTCCCGTTCATATAAAACAAGAAATCATCTGCACCCGCAGTGAGCTGTACGATGCCCAGCTGCTCCTGGAGGCGACTTCCGCGCGCAAGGAACTGGAGAACTATAATCCGGCCATAGTCAACGACTTGGAGGAGATCCTGCGATCCCCGGACAAATCAAAGTCGCCCCGCCGACGCACGATCAGTGAGCGAACGGACGATGAAATCAAACCGGAGCCTTATTCGCCGCATCAGCAGAATTTCGATTTTGTCCGAAGGTCAACTCGGCCCAGGCGGCCGGTGGTGAATCGGAAATACCTCGGCTATGAAACCGAACTGCCCgcaccaaaaccaaaaccacGGGCGGATAAGCGAGTGGTGGAGAATAAGCCTGCCGCTATCCGTAAATCACCTCCAATATCATCACCTCCACCAGCACCAATGCCTCCTGTGCGCAAGCAGCAATATTTCGAGTGCGAAATGTGTTCGGCTGTGTTCCCCGATCGCGCACAACTTCTGGATCACGTACCTATCCACATATAG
- Protein Sequence
- MDTQAYGIPSWVPQIDRGHGNQEIIIGDSEGDSGNHTDYLVHEVPTNLDQIAAENLIFMAREGQMEIVDGNTDGTDGNDDSGIVNFHEDYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHIPAEDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKGSLMNHMVAHQNDRPHVCKLCGSRFFRRTDLINHLKAHAEASEYEDNDYFEPQRHSPQNDHYYDQDWSATEARPAKKSRSKRTPNVPKEDNYTIDETLRHRSEHSQLQHQLPAHQEHQPDHYYQHQQQEHYEEEIVTEVDTKMVQQFPIIDENKPFVCQQCGLSFAREKAMLSHVKAHRNDSAFECATCNEMFWDAHTLQEHQKSHQFEASNSEYEPDVDNESDSESEYKYGEFYCHQCGMSFHRQDLLRRHTKSHIKKEVIDKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGETFFEESTIKRHLTNLHDTEMTSNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKSFHNKARLKRHMASHRDKSVVCNVCNEEFPDGRTLSNHRHSHSVNASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCSVCCSELPSSSELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTDNKTNSSDIDISDFDMDNVDDLLGIPSSAPTHANKHNRDATAAVSQHLPAAAGVSLESQGDGQKKRYNSTGSSERLSNNWHTKLINSTTDDTYKSLLSNLENTLQSIDTLVVSNPSSYNNTATSIPAEPTAPVAATKVPKTPRRKNTAASKTNNRPKMIHTEKARVPIENGKRKSKTYVTRTEPTDLDMFAQRSKRTTHANDYEIISPDKYPPKQIQSSPVHIKQEIICTRSELYDAQLLLEATSARKELENYNPAIVNDLEEILRSPDKSKSPRRRTISERTDDEIKPEPYSPHQQNFDFVRRSTRPRRPVVNRKYLGYETELPAPKPKPRADKRVVENKPAAIRKSPPISSPPPAPMPPVRKQQYFECEMCSAVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_00312862;
- 80% Identity
- -