Eten015327.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- znf711
- Assembly
- GCA_905231855.1
- Location
- HG993124.1:44906348-44910010[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.9e-05 0.015 16.3 0.8 1 23 150 172 150 172 0.95 2 15 0.0006 0.091 13.8 2.0 1 23 178 200 178 200 0.96 3 15 0.00011 0.018 16.1 0.3 1 23 323 345 323 345 0.98 4 15 0.00052 0.079 14.0 0.3 1 23 351 373 351 373 0.98 5 15 2.4e-06 0.00036 21.4 3.1 1 23 401 423 401 423 0.98 6 15 0.0057 0.87 10.7 0.3 1 23 434 456 434 456 0.94 7 15 0.0059 0.9 10.7 0.5 1 23 462 485 462 485 0.94 8 15 0.16 24 6.2 0.4 5 19 496 510 493 511 0.91 9 15 0.00021 0.032 15.3 6.8 1 23 520 542 520 542 0.97 10 15 0.008 1.2 10.3 0.5 2 23 548 569 547 569 0.96 11 15 1e-05 0.0015 19.4 0.3 1 23 578 600 578 600 0.98 12 15 0.00062 0.095 13.8 0.1 3 23 608 628 606 628 0.97 13 15 3.3e-05 0.0051 17.8 0.5 1 23 634 656 634 657 0.95 14 15 6.5 9.9e+02 1.1 0.4 1 23 667 689 667 689 0.89 15 15 0.0094 1.4 10.1 0.0 1 20 1099 1118 1099 1121 0.93
Sequence Information
- Coding Sequence
- ATGGACGCACAAGCGTACGGAATCCCATCGTGGGTTCCGCAAATCGAGAGTGGCCATACCAGCGTTGAGAACCAAGGCATTATTATCGGTGACTCGGAAGGCGACAGTGGTAATCACACTGATTACCTAGTGCAAGAAGTGCCCACCAGCCTTGATCAAATAGCCGCTGAGAATCTAATATTCATGGCACGGGATGGACAAATGGAAATTATTGACGGCAGCAGTGAGGCAAACGACGACAGTGGAATTGTGAATTTTCAAGAAGATTATGCCGAGACACAAATGGTCACTGAGGAGGTAATAACTGATGACTGGGTGCAACATCAAGGAGAAGAGAGGGTTGAAATACCAGCAGATCAAATCTGTGGCTCACTTTCTCATATCTCGGCTCAGGATATTGAAGTGCCTTTGCCAACTGTGCAGGATGAGTATACAGCGTCGCGACCGTATCCTTGTGATTTTTGCAGTCGACGATTTCGTAAAAAAGTTAGCCTCATGAATCACATGGTAGCACATCAAAACGACCGCCCACATGTGTGCAAACTGTGTGGATCGCGTTTCTTTCGCCGAACAGACCTCATCAATCATTTGAAAGCCCATGCCGAAGCGTCGGAATACGAAGAAAATGATTGTAAGTATTGGAGGCAAGTTATTGGAGAAATATGTCTAACTAGAATCCAATCAGATTTCCAGCCGCAGATCCAATCGCCGGAGAATGATCATTACTACGACCAGGAATGGTCGACGGAAACTAAGCCAACAAAAAAGTCCCGTTGTAAACGCCCACCAAAAGTGCCTAAGGAGGAGAACTATACAATTGACGAGTCACTACGGCGGAGACAGGAGCATGTACACGAACAGTATCACCAGCAGGAGCAAGAGCACAATGAACACCAACAGGAAATCGTGTCCAAGGAGGAGACTAAACCTGCCGTTCGATTCCCAGTAATTGACGAGAACAAACCGTTTGTATGTCAACAGTGCGGCTTGTCGTTTGCCAGAGAAAAGGCAATGCTATCACACGTCAAGACGCACCGCAACGATTCAGCGTATGAGTGCAATACGTGCAATGAAATGTTTTGGGATTCGAACGCCCTGCAGGAGCACCAAAAATCGCATCAATTTGAGGCGAGCAATTCGGAATATGAACCAGACATCGACAACGAAAGTGATTCCGAATCAGAATACAAATACGGGGAGTTTTACTGCGACCAATGCGGCATGTCGTTCCATCGCCAAGATTTGCTGCGCCGCCACATAAAGTCACACATCAAGAAGGAGGTCTTCGATAAGGACCAGCATTGCTGCAACACTTGCGGGGAAACTTTCCCAGAGGCTTTGGACCTATTGGCACACGCTGAGATCCATGCTCGGTACCCACCTTTCAAATGCGTTTTGTGTGGCGAGTCATTCTACGAAGAGACCACGATCAGACGCCATTTGACGAATCTTCACTCTGCTGAAATGACGTCCAATTCGTGCATCCTCTGCGGGAAAGAGTGCCGGGATCGCAAAGCATTGATGAAGCACGCATGGGATCATTCAAGAGAAAAGTGCCACTCGTGTTCAAAGTGCGGCAAGAATTTCCACAACAAAGCCCGCTTAAAGCGGCATATGACATCGCATCGCGACAAGTCAGTGGTTTGTAATGTTTGCAACGAAGAATTTCCTGATGGCAGATCTCTGTCAAATCACAGGCATTCACACAGTGCCAACGCATCCGGAAAACTCTTCCCCTGCCAGGAGTGCGGAAAAACGTTTGGATCAAGAAGTTCCCAACAAATACACGTTCGTATCCACACAGGAGAGAGACCGTATGGCTGTCGATACTGCTGGAAAGCCTTCGCAGACGGTGGAACTCTCAGGAAGCATGAACGTATTCACACTGGTGAAAAACCATATGCATGTTCAGTGTGCCCACGTGCCTTCAATCAGCGAGTTGTGCTGCGGGAACACATACGGTCGCATCATTCTGGGCTGGACACCAAGCGCGGCACGTATTACTGTTCCGTCTGCTGTAGTGAGCTGCCTTCGTCGGTGGACCTGATCCAGCATCTAATTCAACACAGCGACACAAACACGGCGATGCAGCGGCAGCCTGTGACTGGTCCAAGGAAATATAAACGCCGTCGAAAGCTGAAACCTCACGAAATCGATCGTCTTCGAGCAGAGAATAAAACTACCAGCAGCGACATCGATATTTCCGACTTTGACATGGAAAATGTGGACGAACTCTTCGGCATCCGGACGTCTGGATCAGGCAGTGCGAACAAACATAACCGAGACACGGCTCAGGGCTCGGTTCAGCATTCATCATCGGGCGCTGGCTTGGAGTCCCCCGGCGGCGATGAAGCGAAAAAACGCTACAACTCCGAAGGCAGCCCAGAAAAACTACCCAACAATTGGCACACGAAGCTCATCAACTCAACCAACAATGATACATTCAAATCGCTTTTGTCAAACCTCGAGAACACACTGCAATCCATCGATACATTAGTTGTAAGCAACCCGGCTTCCTACGGAACCAACACAGTCAGTGCTGCCGCAGATGCGGCGTCCCCTTCGACCGCCACAGCAGCCTCAAAGGCTCCAAAGACCCCCCGGCGGAAGAACGCGTCCACGTCAAAGACAACACATCGCCCGAAAATGATTCACACAGAGAAATCACGTGTTCCCGTTGAGAATGGAAAGCGAAAGTCAAAAACCTTCGTAACACGCACCGAACCTGCTGACCTAGATATGTTTGCTCAACGCTCGAAGCGTACCAACCACACGAATGACTACGAAATCATTTCTCCGGAGAGCTATCCCCCGAATCAAATTCAATCTAGTCCAGTGCACATAAAGCAAGAAGTCGTATGCTCGCGCAGTGAACTGTATGAAGCTCAGCTTCTGCTAGAGGCAACCTCAGCTCGCAGAGAGTTCGATAAGTACAATCCTGCCATAGTCAACGATCTGGAGGAGATTCTACGCTCGCCTGAGAAGAAGTCACCCCGTCGACGAACAATCAGCGACCGAACTGATGACGAAATCAAAGTCGAGCCTTATTCACCCAACCAGCAGAATTTTGATTTTGTCCGGAGATCAACGCGGCCCAGGCGACCGGTTGTGAATAGAAAATACGTTGGCTACGAAACAGAGCTGCCGACACCAAAACAAAAGACACGTTCCGAGAAACGTGTTCCGGATAGTAAACCGCTTCCAAGTGAGGCAGTGGAGGATAGCTTGCCAGTTATGAAACCATCTGCCACGCCACCGTCTCCAACAAAGCCTCCAGTACGAAAGCAGCATTATTTTGAATGTGAAATGTGTTCGGCTGTGTTCCCCGATCGAGCTCAGCTTCTAGATCATGTACCTATTCATATATAA
- Protein Sequence
- MDAQAYGIPSWVPQIESGHTSVENQGIIIGDSEGDSGNHTDYLVQEVPTSLDQIAAENLIFMARDGQMEIIDGSSEANDDSGIVNFQEDYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHISAQDIEVPLPTVQDEYTASRPYPCDFCSRRFRKKVSLMNHMVAHQNDRPHVCKLCGSRFFRRTDLINHLKAHAEASEYEENDCKYWRQVIGEICLTRIQSDFQPQIQSPENDHYYDQEWSTETKPTKKSRCKRPPKVPKEENYTIDESLRRRQEHVHEQYHQQEQEHNEHQQEIVSKEETKPAVRFPVIDENKPFVCQQCGLSFAREKAMLSHVKTHRNDSAYECNTCNEMFWDSNALQEHQKSHQFEASNSEYEPDIDNESDSESEYKYGEFYCDQCGMSFHRQDLLRRHIKSHIKKEVFDKDQHCCNTCGETFPEALDLLAHAEIHARYPPFKCVLCGESFYEETTIRRHLTNLHSAEMTSNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMTSHRDKSVVCNVCNEEFPDGRSLSNHRHSHSANASGKLFPCQECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCSVCCSELPSSVDLIQHLIQHSDTNTAMQRQPVTGPRKYKRRRKLKPHEIDRLRAENKTTSSDIDISDFDMENVDELFGIRTSGSGSANKHNRDTAQGSVQHSSSGAGLESPGGDEAKKRYNSEGSPEKLPNNWHTKLINSTNNDTFKSLLSNLENTLQSIDTLVVSNPASYGTNTVSAAADAASPSTATAASKAPKTPRRKNASTSKTTHRPKMIHTEKSRVPVENGKRKSKTFVTRTEPADLDMFAQRSKRTNHTNDYEIISPESYPPNQIQSSPVHIKQEVVCSRSELYEAQLLLEATSARREFDKYNPAIVNDLEEILRSPEKKSPRRRTISDRTDDEIKVEPYSPNQQNFDFVRRSTRPRRPVVNRKYVGYETELPTPKQKTRSEKRVPDSKPLPSEAVEDSLPVMKPSATPPSPTKPPVRKQHYFECEMCSAVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_00672352;
- 80% Identity
- -