Vina009354.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- PEG3
- Assembly
- GCA_907269105.1
- Location
- OU026153.1:224458214-224461896[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00012 0.02 16.3 0.8 1 23 153 175 153 175 0.95 2 15 0.00042 0.07 14.6 1.3 1 23 181 203 181 203 0.96 3 15 0.00014 0.024 16.1 0.3 1 23 307 329 307 329 0.98 4 15 0.00092 0.15 13.5 0.4 1 23 335 357 335 357 0.99 5 15 4.5e-05 0.0076 17.7 6.7 1 23 385 407 385 407 0.98 6 15 0.0055 0.92 11.1 0.3 1 23 418 440 418 440 0.94 7 15 0.36 60 5.4 0.3 1 23 446 469 446 469 0.92 8 15 0.19 32 6.2 0.4 5 19 480 494 477 495 0.91 9 15 3e-05 0.005 18.2 5.6 1 23 504 526 504 526 0.97 10 15 0.0098 1.6 10.3 0.5 2 23 532 553 531 553 0.96 11 15 8.4e-06 0.0014 20.0 0.3 1 23 562 584 562 584 0.98 12 15 0.00077 0.13 13.8 0.1 3 23 592 612 590 612 0.97 13 15 4.1e-05 0.0069 17.8 0.5 1 23 618 640 618 641 0.95 14 15 0.0078 1.3 10.6 0.2 1 23 651 673 651 673 0.97 15 15 0.012 1.9 10.1 0.0 1 20 1079 1098 1079 1101 0.93
Sequence Information
- Coding Sequence
- atggaCACCCAGACGTACGGAATTACATCGTGGGTTCCTCAAATGGAACGGACTCATGCTGGTGATGACAATCAAAGCATCATTATCGGCGACTCAGAAGGTGATAGCGGTAATCACACTGATTATTTGGTGCATGAAGTGCCAACAAATCTTGACCAAATCGCAGCGGAGAACCTAATTTTTATGGCTAGAGATGGTCAGATGGAAATCATCGATGGCAGCAGTGAAGTAGAAGATGGAAACGATGATAGCGGCATTGTGAATTTTCATGAAGATTACGCCGAAACCCAGATGGTTACTGAGGAGGTAATAACTGATGATTGGGTGCAACATCAAGGTGAAGAAAGAGTTGAAATACCAGCAGATCAGATTTGTGGTTCGCTATCACATTTATCTGCTCAGGAAATAGAAGTGCCTTTGCCAACTGTGCAAGATGAGTACACAGCTTTACGGCCGTATCCTTGTGATTTTTGCAGTCGGCGGTTTCGCAAAAAAGTCAGTCTGATGAATCATATGGTGGCGCATCAAAACGATCGACCACATGTGTGTAAACTATGTGGATCGCGTTTTTTTCGTCGGGGAGATCTTATCAATCATTTGAAGGCCCACGCGGAAGCAACAGAACTTGAGGACAATGATTACTTCCAACAGCCTAGAGAGTCACCAAAGAATGATCACTATTATGATCAAGATTGGTCCAATGAAGTGAAAACGACGAAGAAATCGCGTACCAAACGTACACCGAAGGTGCCTAAGGAAGAGAACTATACAATTGACGAAACACTTCGTCAAAAGCAGGAACAACAGCATCAAGAATTTTATAATCAGCAGCATCAGCAGCATTATCAAGAAGAGGTCGTGGAAGAGCACGAAACAAACACTACTCAACGGTATCCCATTATAGATGAGAACAAGCCATTTGTCTGCCAACAATGTGGCTTGTCTTTTGCAAGAGAGAAAGCAATGCTGTCGCATGTTAAGACCCATCGTCATGATTCAGCTTATGAATGTACAACGTGTAACGAGATGTTTTGGGATGCTAATACATTACAGGAGCATCAAAAGATGCATCAGTTTGAGGCCAGTAATTCGGAATACGAACCCGACATTGACAATGAAAGTGATTCGGAATCAGAGTACAAATACGGTGAATTCTATTGTCACCAGTGTGGTATGTCTTTTCACCGCCAAGACTTGTTGCGTCGACATACAAAGTCACATATTAAGAAAGAAGTCTTTGACAAAGATCAGCATTGTTGCAATACTTGCGGAGAGAGCTTCGCCGAAGCTTTAGATCTGCTGGCACATGCTGAAATCCATGCGAGATATCCACCTTTTAAGTGCATTCTGTGTGGTGAATCATTTTTTGAGGACTCCGCCATTAAGCGTCATCTGACAAATCTGCACTCTGCCGAAATGACGCCCAATTCATGCATTCTTTGCGGGAAGGAATGCCGAGATCGAAAGGCTTTGATGAAACATGCTTGGGATCATTCGAGAGAAAAATGCCACTCGTGTTCGAAGTGCGGTAAAAGTTTTCACAATAAAGCCCGTTTAAAGCGACACATGGCTTCACACCGAGACAAGTCAGTGGTGTGCAATGTATGCAATGAAGAATTCCCCGATGGGAGGTCGCTATCCAATCACAGACACTCACATAGTGCTAATGCTTCTGGAAAGCTATTTCCCTGCCAAGATTGTGGTAAAACTTTTGGCTCAAGAAGTTCACAACAGATTCATGTGCGTATTCATACGGGAGAGCGTCCATATGGTTGCCGTTATTGTTGGAAGGCTTTTGCCGATGGTGGTACTTTGAGAAAACATGAACGCATTCACACTGgcgAAAAACCTTACGCTTGCTCAGTGTGTCCGCGTGCCTTTAATCAGAGAGTTGTTCTTAGAGAACACATACGATCACATCATTCTGGACTAGATACAAAGCGAGGAACATATTACTGTACCGTATGCTCTAGTGAGTTATCTTCTTCCTCGGAGCTGATTCAACATTTGATACAACATAGCGACATTAATACAGCTATGCAGCGGCAACCTGTTACTGGTCCTCGAAAGTACAAACGTCGTCGGAAGCTGAAACCCCATGAAATCGATCGTCTTCGTACAGAAAATAAGACAAACAGTAGTGACATCGACATATCAGATTTTGATATGGACAACGTCGATGATCTTCTTGGCATTCCTACTTCTACAACAAGCGCtgcgaacaaaaacaacagagaTGCCACTGATCAGACATCACAATTATCGGCAAACACTTCGTTGGAATCCCCAAGTTGTAGCGGGTCTAAAAAACGCTATAGTTCCACTGGAAGCTCTGAGAAAATTTCCAATAATTGGCACACCAAATTGATCAACTCCACCACTGATGATACGTACAAATCACTTCTCTCCAATCTTGAGAATACACTTCAGACTATCGACACTCTTGTTGTTAGTATTCCATCATCGTATGGAACTACTACCTCAAATGTGTGCAATGAACCGTCTCCAACTTCTGCACCCGTGGTGCAACAAAAAACGCCAAAGACCCCACGAAGAAAAACTCCAGCACTGCCGAAAACAAATAATCGCCCTAAAATGATTCACACAGAGAAAGCTCGCGTACCAAACGAAAATGgtaaaaagaaatcgaaaaccTTAGTCACACGCACCGAAACAAGCGATTTGGATATGCTAACACAGCGCTCAAAGCGCTCTAATCACCCAAATGATTATGAAATCATTTTACCTGATAAGTACCCTCCAAATCAGATTCAATCTAGTCCAGTTCATATAAAACAGGAAGTTGTGTGCACGCGCAGTGAATTATACGACGCTCAACTACTATTGGAAGCAACATCTGCTCGAAGGGAGCTGGAAAAATATAATCCCGCTATCGTTCATGATCTAGAAGAGATTCTGCGATCGCCGGAAAAATCAAAATCGCCACGTCGTCGAACCACAAGTGAGCGAACAGATGATGAGATCAAAGTCGAACCTTATTCGCCAATTCAACCGAATTTCGATTTTGTTCGAAGATCAACTAGGCCTCGGCGGCCTGTAGTCAATCGAAAATATCTCGGCTTTGAGACCGATTTACCTGCGTCGAAATCAAAACCACGAGCCGAAAAAAGGGCAATAGAAACGAAACCAGTCAGAGTTGATCACGTACCTGTTTCGAAATCTCCTCCAGTAACATCACCACCTCCAACCCCTCCTGTACGTAAGCAGCACTATTTCGAATGTGAAATGTGCTCGGCTGTCTTCCCCGATCGAGCTCAACTGCTGGATCATGTACCGATTCATATATGA
- Protein Sequence
- MDTQTYGITSWVPQMERTHAGDDNQSIIIGDSEGDSGNHTDYLVHEVPTNLDQIAAENLIFMARDGQMEIIDGSSEVEDGNDDSGIVNFHEDYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHLSAQEIEVPLPTVQDEYTALRPYPCDFCSRRFRKKVSLMNHMVAHQNDRPHVCKLCGSRFFRRGDLINHLKAHAEATELEDNDYFQQPRESPKNDHYYDQDWSNEVKTTKKSRTKRTPKVPKEENYTIDETLRQKQEQQHQEFYNQQHQQHYQEEVVEEHETNTTQRYPIIDENKPFVCQQCGLSFAREKAMLSHVKTHRHDSAYECTTCNEMFWDANTLQEHQKMHQFEASNSEYEPDIDNESDSESEYKYGEFYCHQCGMSFHRQDLLRRHTKSHIKKEVFDKDQHCCNTCGESFAEALDLLAHAEIHARYPPFKCILCGESFFEDSAIKRHLTNLHSAEMTPNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKSFHNKARLKRHMASHRDKSVVCNVCNEEFPDGRSLSNHRHSHSANASGKLFPCQDCGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCTVCSSELSSSSELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTENKTNSSDIDISDFDMDNVDDLLGIPTSTTSAANKNNRDATDQTSQLSANTSLESPSCSGSKKRYSSTGSSEKISNNWHTKLINSTTDDTYKSLLSNLENTLQTIDTLVVSIPSSYGTTTSNVCNEPSPTSAPVVQQKTPKTPRRKTPALPKTNNRPKMIHTEKARVPNENGKKKSKTLVTRTETSDLDMLTQRSKRSNHPNDYEIILPDKYPPNQIQSSPVHIKQEVVCTRSELYDAQLLLEATSARRELEKYNPAIVHDLEEILRSPEKSKSPRRRTTSERTDDEIKVEPYSPIQPNFDFVRRSTRPRRPVVNRKYLGFETDLPASKSKPRAEKRAIETKPVRVDHVPVSKSPPVTSPPPTPPVRKQHYFECEMCSAVFPDRAQLLDHVPIHI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_01522836; iTF_01521334;
- 80% Identity
- -