Csor013653.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- PEG3
- Assembly
- GCA_948107745.1
- Location
- OX443562.1:87931099-87934784[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 7.9e-05 0.0092 17.1 0.8 1 23 153 175 153 175 0.95 2 15 0.00083 0.097 13.8 2.0 1 23 181 203 181 203 0.96 3 15 0.00016 0.019 16.1 0.3 1 23 324 346 324 346 0.98 4 15 0.0036 0.42 11.8 0.2 1 23 352 374 352 374 0.98 5 15 0.00016 0.018 16.1 6.5 1 23 402 424 402 424 0.98 6 15 0.0069 0.81 10.9 0.3 1 23 435 457 435 457 0.94 7 15 0.0048 0.56 11.5 0.6 1 23 463 486 463 486 0.95 8 15 0.22 26 6.2 0.4 5 19 497 511 494 512 0.91 9 15 3.4e-05 0.004 18.2 5.6 1 23 521 543 521 543 0.97 10 15 0.016 1.9 9.8 0.5 2 23 549 570 548 570 0.96 11 15 7.6e-06 0.00089 20.2 1.0 1 23 579 601 579 601 0.98 12 15 0.00087 0.1 13.8 0.1 3 23 609 629 607 629 0.97 13 15 4.6e-05 0.0054 17.8 0.5 1 23 635 657 635 658 0.95 14 15 2 2.3e+02 3.2 0.5 1 23 668 690 668 690 0.93 15 15 0.013 1.5 10.1 0.0 1 20 1092 1111 1092 1114 0.93
Sequence Information
- Coding Sequence
- ATGGACACCCAAGCCTATGGAATCCCATCGTGGGTTCCGCAAATCGAGCGTAGTCATGCTGTCGATGACAATCCGGGAATGATAATCGGTGATTCGGAAGGCGATAGCGGCAATCACACAGACTACCTAGTTCATGAAGTGCCAACAAATCTCGACCAAATAGCTGcagaaaatctaatttttatgGCTCGAGATGGTCAGATGGAGATCATAGATGGGAACACTGATGTGGCCGACGGAAACGACGACAGTGGCATTGTCAACTTTCATGAGGATTATGCTGAAACCCAAATGGTTACAGAGGAGGTGATTACCGACGATTGGGTGCAGCATCAAGGCGAAGAAAGagtcGAGATACCAGCAGATCAAATCTGTGGCTCCCTGTCACATATACCGGCTGAAGATATTGAAGTGCCTTTGCCAACAGTGCAGGATGAATACACAGCATTGCGGCCGTATCCTTGTGACTTTTGCAGTCGACGATTTCGCAAAAAAGGCAGTCTGATGAATCATATGGTGGCGCATCAAAACGATCGACCTCATGTGTGTAAGCTGTGTGGATCGCGTTTCTTTCGTCGAACAGACCTCATCAATCACCTTAAAGCTCACGCAGAGGCGTCAGAGTATGAGGACAACGATTACTTTGAGCCGCAGAGACATTCGCCACAGAACGACCACTACTATGATCAAGACTGGTCCACCACTGATGCTAGGCCGGCAAAGAAATCGCGCAATAAGCGCGCACCGAAGGTGCCTAAGGAGGACAATTACACCATTGATGAGACGCTACGCAATCGAAACGAACATCCACAGCAAGAAGAACAacaccaccatcaccatcaccagcaGCAGCTGCCACAAGAGCACTATTACCAGCATCAGCAGCAAGAGCACTACGAGGAAGAGATCGTAACAGAGGTGGACACAAAGATTGTACAGCGATTTCCCATCATCGATGATAACAAGCCGTTCGTTTGTCAACAGTGTGGCTTGTCATTTGCCCGTGAGAAGGCAATGCTGTCTCATGTCAAGACGCATCGCAATGACTCTGCATTTGAATGTGGTACGTGCAACGAGATGTTTTGGGATGCCAACACACTGCAGGAGCATCAAAAATCGCATCAATTCGAAGCGAGCAACTCGGAATACGAACCCGATGTGGACAATGAAAGTGATTCGGAATCAGAGTACAAATACGGTGAATTCTATTGCCACCAGTGTGGCATGTCCTTCCATCGCCAGGATCTGTTACGTCGCCACAGTAAGTCGCACATTAAGAAGGAGATTATCGACAAGGATCAACATTGCTGTAACACTTGTGGAGAGACTTTTGCTGAGGCCTTAGATCTGCTGGCGCATGCGGAAATTCACGCGAGATATCCGCCTTTCAAATGTGTTCTATGTggagaaacattttttgaagAATCTACCATTAAGCGCCATTTAACCAACCTCCACGAAGCCGAAATGACCTCTAATTCGTGCATCCTCTGTGGCAAGGAATGCCGCGATCGCAAAGCTCTTATGAAGCACGCCTGGGATCATTCGAGAGAAAAGTGCCATTCGTGTTCAAAGTGTGGAAAGAGCTTCCACAATAAAGCCCGCTTGAAGCGGCATATGGCTTCGCATCGCGACAAGTCGGTGGTCTGCAATGTTTGCAATGAAGAATTTCCCGATGGGAGGACTCTTTCAAACCACAGGCACTCGCATAGCGTCAACGCCTCGGGCAAACTCTTTCCTTGTCACGAGTGTGGAAAGACCTTCGGATCAAGGAGTTCGCAACAGATTCATGTGCGTATTCACACGGGAGAACGGCCTTACGGATGTCGTTACTGTTGGAAAGCATTCGCCGATGGTGGGACTCTTCGAAAACATGAACGCATTCACACAGGAGAGAAGCCTTACGCCTGTTCAGTGTGCCCACGTGCCTTTAATCAGAGAGTTGTTCTCAGGGAGCACATTCGGTCCCACCACTCGGGGTTGGACACGAAACGTGGAACGTATTACTGTTCAGTCTGCTGCAGCGAGCTGCCCTCCTCCTCGGAGTTGATTCAGCACTTGATTCAGCACAGCGACATCAACACAGCCATGCAGCGGCAACCTGTGACTGGTCCACGAAAGTACAAACGTCGTCGAAAGCTGAAACCGCACGAGATCGATCGACTTCGCACGGATAACAAGACCAATAGCAGTGACATCGACATCTCCGACTTTGATATGGACAATGTTGATGACCTCCTCGGCATTCCCACCTCAGCGCCCAGcaatacaaacaaacacaatCGAGATACATCTGCAGCGGGATCGCACCATTCAACAGCGGCGGCAGCCGTATCATTGGAATCACAAGGTGTCGGCTCGAAAAAACGCTACAACTCGACAGGCAGCTCAGAGAGACTCTCCAACAACTGGCACACCAAGTTGATCAACTCTACCAGCGATGACACCTACAAGTCGTTGCTGTCGAATCTCGAAAACACTTTGCAGAGTATCGACACTTTAGTTGTGAGTAATCCATCGTCATACAACAACACCAACACTAGTGTTCCCACGGAATCGCCAGCACCTGTTGCTGCCCCGAAAGTGCCAAAGACGCCACGACGAAAAAACGCAGCTGCGTCGAAGACATCCAATCGCCCGAAAATGATTCACACCGAAAAGGCGCGAGTTCCTATTGAAAACGGCAAACGAAAGTCGAAAACTTACGTAACCCGCACCGAACCAGCTGAATTAGATATGTTTGCGCAGCGCTCTAAGCGCACAACCCACGCGAATGACTACGAAATTATATCGCCGGATAAATACCCGCCAAAGCAGATCCAATCTAGTCCCGTTCAtataaaacaagaaacaatCTGCACCCGCAGTGAGCTGTACGATGCCCAGCTGCTGCTGGAGGCAACATCCGCCCGTAGGGAGCTGGAAAACTATAACCCCGCTATAGTCAACGATTTGGAGGAGATCCTGCGATCCCCAGACAAATCAAAGTCACCCCGCCGACGCACGATCAGTGAGCGAACGGACGATGAGATCAAACCGGAGCCTTATTCCCCGCATCAGCAGAATTTCGATTTTGTTCGAAGGTCAACGCGCCCCAGGCGGCCTGTAGTAAATCGGAAATACCTCGGCTATGAGACCGATCTGCCCGCGCCGAAACCAAAGCCACGGTCCGATAAAAGAGCAGTGGAGAGTAAACCTACAGCTGTTCGTAAGTCGCCTCCAATATCGTCACCTCCACCAGCACCAATTCCTCCGGTGCGAAAGCAACAATATTTCGAGTGCGAGATGTGTTCGGCTGTGTTCCCCGATCGCGCACAGCTTCTGGATCACGTACCTATCCACATATAG
- Protein Sequence
- MDTQAYGIPSWVPQIERSHAVDDNPGMIIGDSEGDSGNHTDYLVHEVPTNLDQIAAENLIFMARDGQMEIIDGNTDVADGNDDSGIVNFHEDYAETQMVTEEVITDDWVQHQGEERVEIPADQICGSLSHIPAEDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKGSLMNHMVAHQNDRPHVCKLCGSRFFRRTDLINHLKAHAEASEYEDNDYFEPQRHSPQNDHYYDQDWSTTDARPAKKSRNKRAPKVPKEDNYTIDETLRNRNEHPQQEEQHHHHHHQQQLPQEHYYQHQQQEHYEEEIVTEVDTKIVQRFPIIDDNKPFVCQQCGLSFAREKAMLSHVKTHRNDSAFECGTCNEMFWDANTLQEHQKSHQFEASNSEYEPDVDNESDSESEYKYGEFYCHQCGMSFHRQDLLRRHSKSHIKKEIIDKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGETFFEESTIKRHLTNLHEAEMTSNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKSFHNKARLKRHMASHRDKSVVCNVCNEEFPDGRTLSNHRHSHSVNASGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDTKRGTYYCSVCCSELPSSSELIQHLIQHSDINTAMQRQPVTGPRKYKRRRKLKPHEIDRLRTDNKTNSSDIDISDFDMDNVDDLLGIPTSAPSNTNKHNRDTSAAGSHHSTAAAAVSLESQGVGSKKRYNSTGSSERLSNNWHTKLINSTSDDTYKSLLSNLENTLQSIDTLVVSNPSSYNNTNTSVPTESPAPVAAPKVPKTPRRKNAAASKTSNRPKMIHTEKARVPIENGKRKSKTYVTRTEPAELDMFAQRSKRTTHANDYEIISPDKYPPKQIQSSPVHIKQETICTRSELYDAQLLLEATSARRELENYNPAIVNDLEEILRSPDKSKSPRRRTISERTDDEIKPEPYSPHQQNFDFVRRSTRPRRPVVNRKYLGYETDLPAPKPKPRSDKRAVESKPTAVRKSPPISSPPPAPIPPVRKQQYFECEMCSAVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00389816;
- 90% Identity
- iTF_00312862;
- 80% Identity
- -